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1ZG5
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BU of 1zg5 by Molmil
NarL complexed to narG-89 promoter palindromic tail-to-tail DNA site
Descriptor: 5'-D(*CP*GP*TP*AP*CP*CP*CP*CP*TP*AP*TP*AP*GP*GP*GP*GP*TP*AP*CP*G)-3', Nitrate/nitrite response regulator protein narL, SULFATE ION
Authors:Maris, A.E, Kaczor-Grzeskowiak, M, Ma, Z, Kopka, M.L, Gunsalus, R.P, Dickerson, R.E.
Deposit date:2005-04-20
Release date:2005-11-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Primary and Secondary Modes of DNA Recognition by the NarL Two-Component Response Regulator.
Biochemistry, 44, 2005
1ZG1
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BU of 1zg1 by Molmil
NarL complexed to nirB promoter non-palindromic tail-to-tail DNA site
Descriptor: 5'-D(*CP*GP*TP*AP*CP*CP*CP*AP*TP*TP*AP*AP*GP*GP*AP*GP*TP*AP*CP*G)-3', 5'-D(*CP*GP*TP*AP*CP*TP*CP*CP*TP*TP*AP*AP*TP*GP*GP*GP*TP*AP*CP*G)-3', Nitrate/nitrite response regulator protein narL, ...
Authors:Maris, A.E, Kaczor-Grzeskowiak, M, Ma, Z, Kopka, M.L, Gunsalus, R.P, Dickerson, R.E.
Deposit date:2005-04-20
Release date:2005-11-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Primary and Secondary Modes of DNA Recognition by the NarL Two-Component Response Regulator.
Biochemistry, 44, 2005
1JE8
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BU of 1je8 by Molmil
Two-Component response regulator NarL/DNA Complex: DNA Bending Found in a High Affinity Site
Descriptor: 5'-D(*CP*GP*TP*AP*CP*CP*CP*AP*TP*TP*AP*AP*TP*GP*GP*GP*TP*AP*CP*G)-3', Nitrate/Nitrite Response Regulator Protein NARL, SULFATE ION
Authors:Maris, A.E, Sawaya, M.R, Kaczor-Grzeskowiak, M, Jarvis, M.R, Bearson, S.M.D, Kopka, M.L, Schroder, I, Gunsalus, R.P, Dickerson, R.E.
Deposit date:2001-06-15
Release date:2002-09-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Dimerization allows DNA target site recognition by the NarL response regulator.
Nat.Struct.Biol., 9, 2002
4L5E
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BU of 4l5e by Molmil
Crystal structure of A. aeolicus NtrC1 DNA binding domain
Descriptor: SULFATE ION, Transcriptional regulator (NtrC family)
Authors:Young, A, Maris, A.E, Vidangos, N.K, Hong, E, Pelton, J.G, Batchelor, J.D, Wemmer, D.E.
Deposit date:2013-06-10
Release date:2013-08-28
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Structure, function, and tethering of DNA-binding domains in sigma (54) transcriptional activators.
Biopolymers, 99, 2013
4L4U
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BU of 4l4u by Molmil
Crystal structure of construct containing A. aeolicus NtrC1 receiver, central and DNA binding domains
Descriptor: Transcriptional regulator (NtrC family)
Authors:Vidangos, N.K, Maris, A.E, Young, A, Hong, E, Pelton, J.G, Batchelor, J.D, Wemmer, D.E.
Deposit date:2013-06-09
Release date:2013-08-28
Last modified:2013-10-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure, function, and tethering of DNA-binding domains in sigma (54) transcriptional activators.
Biopolymers, 99, 2013
1ZY2
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BU of 1zy2 by Molmil
Crystal structure of the phosphorylated receiver domain of the transcription regulator NtrC1 from Aquifex aeolicus
Descriptor: MAGNESIUM ION, transcriptional regulator NtrC1
Authors:Doucleff, M, Chen, B, Maris, A.E, Wemmer, D.E, Kondrashkina, E, Nixon, B.T.
Deposit date:2005-06-09
Release date:2005-08-16
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3.03 Å)
Cite:Negative regulation of AAA + ATPase assembly by two component receiver domains: a transcription activation mechanism that is conserved in mesophilic and extremely hyperthermophilic bacteria
J.Mol.Biol., 353, 2005
2HOS
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BU of 2hos by Molmil
Phage-Selected Homeodomain Bound to Unmodified DNA
Descriptor: 3-METHYL-1,3-OXAZOLIDIN-2-ONE, 5'-D(*AP*TP*CP*CP*GP*GP*GP*GP*AP*TP*TP*AP*CP*AP*TP*GP*GP*CP*AP*AP*A)-3', 5'-D(*TP*TP*TP*TP*GP*CP*CP*AP*TP*GP*TP*AP*AP*TP*CP*CP*CP*CP*GP*GP*A)-3', ...
Authors:Shokat, K.M, Feldman, M.E, Simon, M.D.
Deposit date:2006-07-16
Release date:2006-12-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and properties of a re-engineered homeodomain protein-DNA interface.
Acs Chem.Biol., 1, 2006
2HOT
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BU of 2hot by Molmil
Phage selected homeodomain bound to modified DNA
Descriptor: 3-PROP-2-YN-1-YL-1,3-OXAZOLIDIN-2-ONE, 5'-D(*AP*TP*CP*CP*GP*GP*GP*GP*AP*TP*TP*AP*CP*AP*TP*GP*GP*CP*AP*AP*A)-3', 5'-D(*TP*TP*TP*TP*GP*CP*CP*AP*TP*GP*TP*AP*AP*TP*CP*CP*CP*CP*GP*GP*A)-3', ...
Authors:Feldman, M.E, Simon, M.D, Shokat, K.M.
Deposit date:2006-07-16
Release date:2006-12-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Structure and properties of a re-engineered homeodomain protein-DNA interface.
Acs Chem.Biol., 1, 2006
2M8G
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BU of 2m8g by Molmil
Structure, function, and tethering of DNA-binding domains in 54 transcriptional activators
Descriptor: Transcriptional regulator
Authors:Hong, E, Wemmer, D.
Deposit date:2013-05-19
Release date:2013-08-28
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structure, function, and tethering of DNA-binding domains in sigma (54) transcriptional activators.
Biopolymers, 99, 2013

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