Loading
PDBj
English日本語简体中文繁體中文한국어
✖
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1F9K
DownloadVisualize
BU of 1f9k by Molmil
WINGED BEAN ACIDIC LECTIN COMPLEXED WITH METHYL-ALPHA-D-GALACTOSE
Descriptor: ACIDIC LECTIN, CALCIUM ION, MANGANESE (II) ION, ...
Authors:Manoj, N, Srinivas, V.R, Surolia, A, Vijayan, M, Suguna, K.
Deposit date:2000-07-11
Release date:2001-07-11
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3 Å)
Cite:Carbohydrate specificity and salt-bridge mediated conformational change in acidic winged bean agglutinin.
J.Mol.Biol., 302, 2000
1FAY
DownloadVisualize
BU of 1fay by Molmil
WINGED BEAN ACIDIC LECTIN COMPLEXED WITH METHYL-ALPHA-D-GALACTOSE (MONOCLINIC FORM)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACIDIC LECTIN, CALCIUM ION, ...
Authors:Manoj, N, Srinivas, V.R, Surolia, A, Vijayan, M, Suguna, K.
Deposit date:2000-07-14
Release date:2001-07-14
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Carbohydrate specificity and salt-bridge mediated conformational change in acidic winged bean agglutinin.
J.Mol.Biol., 302, 2000
1WBF
DownloadVisualize
BU of 1wbf by Molmil
WINGED BEAN LECTIN, SACCHARIDE FREE FORM
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, MANGANESE (II) ION, ...
Authors:Manoj, N, Srinivas, V.R, Suguna, K.
Deposit date:1998-12-16
Release date:1999-12-22
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of basic winged-bean lectin and a comparison with its saccharide-bound form.
Acta Crystallogr.,Sect.D, 55, 1999
1P9O
DownloadVisualize
BU of 1p9o by Molmil
Crystal Structure of Phosphopantothenoylcysteine Synthetase
Descriptor: Phosphopantothenoylcysteine synthetase, SULFATE ION
Authors:Manoj, N, Strauss, E, Begley, T.P, Ealick, S.E.
Deposit date:2003-05-12
Release date:2003-09-02
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of human phosphopantothenoylcysteine synthetase at 2.3 A resolution.
Structure, 11, 2003
1QZU
DownloadVisualize
BU of 1qzu by Molmil
crystal structure of human phosphopantothenoylcysteine decarboxylase
Descriptor: FLAVIN MONONUCLEOTIDE, hypothetical protein MDS018
Authors:Manoj, N, Ealick, S.E.
Deposit date:2003-09-17
Release date:2004-03-23
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:Unusual space-group pseudosymmetry in crystals of human phosphopantothenoylcysteine decarboxylase.
Acta Crystallogr.,Sect.D, 59, 2003
7BRF
DownloadVisualize
BU of 7brf by Molmil
Structure of NADH complex of Thermotoga maritima alpha-glucuronidase at 2.15 Angstrom resolution
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Alpha-glucosidase, putative
Authors:Manoj, N, Mohapatra, S.B.
Deposit date:2020-03-28
Release date:2021-03-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structure of NADH complex of Thermotoga maritima alpha-glucuronidase at 2.15 Angstrom resolution
To Be Published
7EFZ
DownloadVisualize
BU of 7efz by Molmil
Structure of Thermotoga maritima GH5 endoglucanase TM1752 in complex with TRIS
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Endoglucanase, ISOPROPYL ALCOHOL
Authors:Manoj, N, Garg, P.
Deposit date:2021-03-23
Release date:2022-03-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Structure of Thermotoga maritima GH5 endoglucanase TM1752 in complex with TRIS
To Be Published
5JIB
DownloadVisualize
BU of 5jib by Molmil
Crystal structure of the Thermotoga maritima acetyl esterase (TM0077) complex with a substrate analog
Descriptor: Cephalosporin-C deacetylase, [(3S)-2-oxo-2,3-dihydro-1H-indol-3-yl]acetic acid
Authors:Manoj, N.
Deposit date:2016-04-22
Release date:2017-03-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Crystal structure of Thermotoga maritima acetyl esterase complex with a substrate analog: Insights into the distinctive substrate specificity in the CE7 carbohydrate esterase family
Biochem. Biophys. Res. Commun., 476, 2016
5GMA
DownloadVisualize
BU of 5gma by Molmil
Crystal structure of the P228A variant of Thermotoga maritima acetyl esterase
Descriptor: ACETATE ION, Cephalosporin-C deacetylase
Authors:Manoj, N.
Deposit date:2016-07-13
Release date:2017-06-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural role of a conserved active site cis proline in the Thermotoga maritima acetyl esterase from the carbohydrate esterase family 7
Proteins, 85, 2017
5HFN
DownloadVisualize
BU of 5hfn by Molmil
Crystal structure of a loop truncation variant of Thermotoga maritima Acetyl Esterase TM0077 (apo structure) at 2.75 Angstrom resolution
Descriptor: Cephalosporin-C deacetylase
Authors:Manoj, N, Singh, M.K.
Deposit date:2016-01-07
Release date:2016-05-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:An extended loop in CE7 carbohydrate esterase family is dispensable for oligomerization but required for activity and thermostability
J.Struct.Biol., 194, 2016
5ZCI
DownloadVisualize
BU of 5zci by Molmil
Crystal structure of apo form of Xylose reductase from Debaryomyces nepalensis
Descriptor: Aldose reductase
Authors:Manoj, N.
Deposit date:2018-02-17
Release date:2018-11-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of yeast xylose reductase in complex with a novel NADP-DTT adduct provides insights into substrate recognition and catalysis.
FEBS J., 285, 2018
5ZCM
DownloadVisualize
BU of 5zcm by Molmil
Crystal structure of Xylose reductase from Debaryomyces nepalensis in complex with NADP-DTT adduct
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, Aldose reductase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Manoj, N.
Deposit date:2018-02-19
Release date:2018-11-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of yeast xylose reductase in complex with a novel NADP-DTT adduct provides insights into substrate recognition and catalysis.
FEBS J., 285, 2018
5FDF
DownloadVisualize
BU of 5fdf by Molmil
Crystal structure of the monoclinic form of Thermotoga maritima Acetyl Esterase TM0077 (apo structure) at 1.76 Angstrom resolution
Descriptor: ACETATE ION, CHLORIDE ION, Cephalosporin-C deacetylase
Authors:Manoj, N, Singh, M.K.
Deposit date:2015-12-16
Release date:2016-04-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:An extended loop in CE7 carbohydrate esterase family is dispensable for oligomerization but required for activity and thermostability.
J.Struct.Biol., 194, 2016
6LDR
DownloadVisualize
BU of 6ldr by Molmil
Structure of a K245A mutant of a Group II PLP dependent decarboxylase from Methanocaldococcus jannaschii, in complex with PLP
Descriptor: AMMONIUM ION, GLYCEROL, L-tyrosine/L-aspartate decarboxylase, ...
Authors:Manoj, N, Gayathri, S.C.
Deposit date:2019-11-23
Release date:2020-12-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Structural insights into the mechanism of internal aldimine formation and catalytic loop dynamics in an archaeal Group II decarboxylase.
J.Struct.Biol., 208, 2019
6LDS
DownloadVisualize
BU of 6lds by Molmil
Structure of a K245A mutant of L-tyrosine decarboxylase from Methanocaldococcus jannaschii complexed with L-Tyr: External aldimine form
Descriptor: GLYCEROL, L-tyrosine/L-aspartate decarboxylase, N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)-L-tyrosine, ...
Authors:Manoj, N, Gayathri, S.C.
Deposit date:2019-11-23
Release date:2020-12-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural insights into the mechanism of internal aldimine formation and catalytic loop dynamics in an archaeal Group II decarboxylase.
J.Struct.Biol., 208, 2019
6LDT
DownloadVisualize
BU of 6ldt by Molmil
K245A mutant of L-tyrosine decarboxylase from Methanocaldococcus jannaschii complexed with a post-decarboxylation quinonoid-like intermediate formed with L-tyrosine
Descriptor: GLYCEROL, L-tyrosine/L-aspartate decarboxylase, SULFATE ION, ...
Authors:Manoj, N, Chellam Gayathri, S.
Deposit date:2019-11-23
Release date:2020-12-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Structural insights into the mechanism of internal aldimine formation and catalytic loop dynamics in an archaeal Group II decarboxylase.
J.Struct.Biol., 208, 2019
6M4Y
DownloadVisualize
BU of 6m4y by Molmil
Structure of a R371A mutant of a Group II PLP dependent decarboxylase from Methanocaldococcus jannaschii
Descriptor: GLYCEROL, L-tyrosine/L-aspartate decarboxylase, SULFATE ION
Authors:Manoj, N, Chellam Gayathri, S.
Deposit date:2020-03-09
Release date:2020-12-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystallographic Snapshots of the Dunathan and Quinonoid Intermediates provide Insights into the Reaction Mechanism of Group II Decarboxylases.
J.Mol.Biol., 432, 2020
7BR4
DownloadVisualize
BU of 7br4 by Molmil
Structure of deletion mutant of alpha-glucuronidase (TM0752) from Thermotoga maritima
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Alpha-glucosidase, putative, ...
Authors:Manoj, N, Mohapatra, S.B.
Deposit date:2020-03-26
Release date:2021-03-31
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:A conserved pi-helix plays a key role in thermoadaptation of catalysis in the glycoside hydrolase family 4.
Biochim Biophys Acta Proteins Proteom, 1869, 2021
7CTD
DownloadVisualize
BU of 7ctd by Molmil
Crystal structure of apo form of alpha-glucuronidase (TM0752) from Thermotoga maritima
Descriptor: Alpha-glucosidase, putative
Authors:Manoj, N, Mohapatra, B.S.
Deposit date:2020-08-18
Release date:2021-09-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural basis of catalysis and substrate recognition by the NAD(H)-dependent alpha-d-glucuronidase from the glycoside hydrolase family 4.
Biochem.J., 478, 2021
7CTL
DownloadVisualize
BU of 7ctl by Molmil
Crystal structure of NADH bound holo form of alpha-glucuronidase (TM0752) from Thermotoga maritima at 1.97 Angstrom resolution
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Alpha-glucosidase, putative
Authors:Manoj, N, Mohapatra, B.S.
Deposit date:2020-08-19
Release date:2021-09-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structural basis of catalysis and substrate recognition by the NAD(H)-dependent alpha-d-glucuronidase from the glycoside hydrolase family 4.
Biochem.J., 478, 2021
7CTM
DownloadVisualize
BU of 7ctm by Molmil
Crystal structure of Thermotoga maritima alpha-glucuronidase (TM0752) in complex with NADH and D-glucuronic acid
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Alpha-glucosidase, putative, ...
Authors:Manoj, N, Mohapatra, B.S.
Deposit date:2020-08-19
Release date:2021-09-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural basis of catalysis and substrate recognition by the NAD(H)-dependent alpha-d-glucuronidase from the glycoside hydrolase family 4.
Biochem.J., 478, 2021
6KCX
DownloadVisualize
BU of 6kcx by Molmil
Crystal structure of citrate complex of alpha-glucuronidase (TM0752)from Thermotoga maritima
Descriptor: Alpha-glucosidase, putative, CITRIC ACID, ...
Authors:Manoj, N, Mohapatra, B.S.
Deposit date:2019-06-29
Release date:2020-04-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.933 Å)
Cite:Structure of an alpha-glucuronidase in complex with Co2+and citrate provides insights into the mechanism and substrate recognition in the family 4 glycosyl hydrolases.
Biochem.Biophys.Res.Commun., 518, 2019
6JY1
DownloadVisualize
BU of 6jy1 by Molmil
Crystal Structure of a Group II pyridoxal dependent decarboxylase, LLP-bound form from Methanocaldococcus jannaschii at 1.72 A
Descriptor: GLYCEROL, L-tyrosine/L-aspartate decarboxylase, SULFATE ION
Authors:Manoj, N, Gayathri, S.C.
Deposit date:2019-04-25
Release date:2019-10-30
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Structural insights into the mechanism of internal aldimine formation and catalytic loop dynamics in an archaeal Group II decarboxylase.
J.Struct.Biol., 208, 2019
7EC9
DownloadVisualize
BU of 7ec9 by Molmil
Structure of the Thermotoga maritima Family 5 endo-glucanase in complex with 1-deoxynojiromycin
Descriptor: 1-DEOXYNOJIRIMYCIN, Endoglucanase, ISOPROPYL ALCOHOL
Authors:Manoj, N, Garg, P.
Deposit date:2021-03-11
Release date:2022-03-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of an iminosugar complex of a glycoside hydrolase family 5 lichenase provides insights into the active site.
Biochimie, 204, 2023
2D3S
DownloadVisualize
BU of 2d3s by Molmil
Crystal Structure of basic winged bean lectin with Tn-antigen
Descriptor: 2-acetamido-2-deoxy-alpha-D-galactopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, Basic agglutinin, ...
Authors:Kulkarni, K.A, Sinha, S, Katiyar, S, Surolia, A, Vijayan, M, Suguna, K.
Deposit date:2005-10-01
Release date:2006-01-17
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural basis for the specificity of basic winged bean lectin for the Tn-antigen: a crystallographic, thermodynamic and modelling study
Febs Lett., 579, 2005

 

12>

218500

PDB entries from 2024-04-17

PDB statisticsPDBj update infoContact PDBjnumon