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8HMM
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BU of 8hmm by Molmil
Crystal structure of AoRhaA
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Bac_rhamnosid6H domain-containing protein
Authors:Makabe, K, Koseki, T.
Deposit date:2022-12-05
Release date:2023-12-06
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Aspergillus oryzae alpha-l-rhamnosidase: Crystal structure and insight into the substrate specificity.
Proteins, 92, 2024
1WT5
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BU of 1wt5 by Molmil
The Crystal Structure Of A Humanized Antibody Fv 528
Descriptor: ANTI EGFR ANTIBODY FV REGION
Authors:Makabe, K, Tsumoto, K, Asano, R, Kondo, H, Kumagai, I.
Deposit date:2004-11-16
Release date:2005-05-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Thermodynamic consequences of mutations in vernier zone residues of a humanized anti-human epidermal growth factor receptor murine antibody, 528
J.Biol.Chem., 283, 2008
2AF5
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BU of 2af5 by Molmil
2.5A X-ray Structure of Engineered OspA protein
Descriptor: Engineered Outer Surface Protein A (OspA) with the inserted two beta-hairpins
Authors:Makabe, K, Mcelheny, D, Tereshko, V, Hilyard, A, Koide, A, Koide, S.
Deposit date:2005-07-25
Release date:2006-08-01
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Atomic structures of peptide self-assembly mimics.
Proc.Natl.Acad.Sci.Usa, 103, 2006
5AYP
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BU of 5ayp by Molmil
Crystal structure of Bacillus stearothermophilus Farnesyl pyrophosphate synthase
Descriptor: Farnesyl diphosphate synthase
Authors:Makabe, K, Kijima, T.
Deposit date:2015-08-26
Release date:2016-09-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Crystal structure of Bacillus stearothermophilus Farnesyl pyrophosphate synthase
To Be Published
2FKJ
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BU of 2fkj by Molmil
The crystal structure of engineered OspA
Descriptor: Outer Surface Protein A
Authors:Makabe, K, Terechko, V, Gawlak, G, Yan, S, Koide, S.
Deposit date:2006-01-04
Release date:2006-11-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Atomic structures of peptide self-assembly mimics.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2FKG
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BU of 2fkg by Molmil
The Crystal Structure of Engineered OspA
Descriptor: Outer Surface Protein A
Authors:Makabe, K, Terechko, V, Gawlak, G, Yan, S, Koide, S.
Deposit date:2006-01-04
Release date:2006-11-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Atomic structures of peptide self-assembly mimics.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2G8C
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BU of 2g8c by Molmil
Atomic-resolution crystal structure of Borrelia burgdorferi OspA via surface entropy reduction
Descriptor: IMIDAZOLE, TETRAETHYLENE GLYCOL, outer surface protein A
Authors:Makabe, K, Tereshko, V, Koide, S.
Deposit date:2006-03-02
Release date:2006-08-08
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Atomic-resolution crystal structure of Borrelia burgdorferi outer surface protein A via surface engineering.
Protein Sci., 15, 2006
2HKD
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BU of 2hkd by Molmil
The crystal structure of engineered OSPA
Descriptor: Outer Surface Protein A, TETRAETHYLENE GLYCOL
Authors:Makabe, K, Terechko, V, Koide, S.
Deposit date:2006-07-03
Release date:2006-11-21
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Atomic structures of peptide self-assembly mimics.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2I5V
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BU of 2i5v by Molmil
Crystal structure of OspA mutant
Descriptor: Outer surface protein A, TETRAETHYLENE GLYCOL
Authors:Makabe, K, Terechko, V, Koide, S.
Deposit date:2006-08-25
Release date:2007-12-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:High-Resolution Structure of a Self-Assembly-Competent Form of a Hydrophobic Peptide Captured in a Soluble β-Sheet Scaffold.
J.Mol.Biol., 378, 2008
3B0O
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BU of 3b0o by Molmil
Crystal structure of alpha-lactalbumin
Descriptor: Alpha-lactalbumin, CALCIUM ION
Authors:Makabe, K, Kuwajima, K.
Deposit date:2011-06-10
Release date:2012-06-13
Last modified:2014-01-15
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Structural insights into the stability perturbations induced by N-terminal variation in human and goat alpha-lactalbumin
Protein Eng.Des.Sel., 26, 2013
3B0K
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BU of 3b0k by Molmil
Crystal structure of alpha-lactalbumin
Descriptor: Alpha-lactalbumin, CALCIUM ION
Authors:Makabe, K.
Deposit date:2011-06-10
Release date:2012-06-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural insights into the stability perturbations induced by N-terminal variation in human and goat alpha-lactalbumin
Protein Eng.Des.Sel., 26, 2013
3B0I
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BU of 3b0i by Molmil
Crystal structure of recombinant human alpha lactalbumin
Descriptor: Alpha-lactalbumin, CALCIUM ION, SULFATE ION
Authors:Makabe, K.
Deposit date:2011-06-10
Release date:2012-06-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural insights into the stability perturbations induced by N-terminal variation in human and goat alpha-lactalbumin
Protein Eng.Des.Sel., 26, 2013
2OL7
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BU of 2ol7 by Molmil
The crystal structure of OspA mutant
Descriptor: Outer surface protein A
Authors:Makabe, K, Terechko, V, Koide, S.
Deposit date:2007-01-18
Release date:2007-12-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:beta-Strand Flipping and Slipping Triggered by Turn Replacement Reveal the Opportunistic Nature of beta-Strand Pairing
J.Am.Chem.Soc., 129, 2007
2OL6
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BU of 2ol6 by Molmil
The crystal structure of OspA mutant
Descriptor: Outer surface protein A
Authors:Makabe, K, Terechko, V, Koide, S.
Deposit date:2007-01-18
Release date:2007-12-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:beta-Strand Flipping and Slipping Triggered by Turn Replacement Reveal the Opportunistic Nature of beta-Strand Pairing
J.Am.Chem.Soc., 129, 2007
2OL8
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BU of 2ol8 by Molmil
The crystal structure of OspA mutant
Descriptor: Outer surface protein A
Authors:Makabe, K, Terechko, V, Koide, S.
Deposit date:2007-01-18
Release date:2007-12-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:beta-Strand Flipping and Slipping Triggered by Turn Replacement Reveal the Opportunistic Nature of beta-Strand Pairing
J.Am.Chem.Soc., 129, 2007
2OY1
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BU of 2oy1 by Molmil
The crystal structure of OspA mutant
Descriptor: Outer surface protein A
Authors:Makabe, K, Terechko, V, Koide, S.
Deposit date:2007-02-21
Release date:2007-12-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:beta-Strand Flipping and Slipping Triggered by Turn Replacement Reveal the Opportunistic Nature of beta-Strand Pairing
J.Am.Chem.Soc., 129, 2007
3CKF
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BU of 3ckf by Molmil
The crystal structure of OspA deletion mutant
Descriptor: Outer surface protein A
Authors:Makabe, K, Koide, S.
Deposit date:2008-03-14
Release date:2009-01-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:The promiscuity of beta-strand pairing allows for rational design of beta-sheet face inversion
J.Am.Chem.Soc., 130, 2008
3CKG
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BU of 3ckg by Molmil
The crystal structure of OspA deletion mutant
Descriptor: MAGNESIUM ION, Outer surface protein A
Authors:Makabe, K, Koide, S.
Deposit date:2008-03-14
Release date:2009-01-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The promiscuity of beta-strand pairing allows for rational design of beta-sheet face inversion
J.Am.Chem.Soc., 130, 2008
7X2B
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BU of 7x2b by Molmil
Red fluorescent protein from Diadumene lineata
Descriptor: Red fluorescent protein, SULFATE ION
Authors:Makabe, K, Hotta, J, Mizuno, H.
Deposit date:2022-02-25
Release date:2023-03-01
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Cloning and structural basis of fluorescent protein color variants from identical species of sea anemone, Diadumene lineata.
Photochem Photobiol Sci, 22, 2023
2I5Z
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BU of 2i5z by Molmil
The crystal structure of OspA mutant
Descriptor: Outer surface protein A, TETRAETHYLENE GLYCOL
Authors:Makabe, K, Terechko, V, Koide, S.
Deposit date:2006-08-26
Release date:2007-07-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Hydrophobic surface burial is the major stability determinant of a flat, single-layer beta-sheet.
J.Mol.Biol., 368, 2007
2OY5
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BU of 2oy5 by Molmil
The crystal structure of OspA mutant
Descriptor: Outer surface protein A
Authors:Makabe, K, Terechko, V, Biancalana, M, Yan, S, Koide, S.
Deposit date:2007-02-21
Release date:2008-03-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Aromatic cluster mutations produce focal modulations of beta-sheet structure.
Protein Sci., 24, 2015
2OY8
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BU of 2oy8 by Molmil
The crystal structure of OspA mutant
Descriptor: Outer surface protein A
Authors:Makabe, K, Terechko, V, Koide, A, Koide, S.
Deposit date:2007-02-21
Release date:2008-03-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Aromatic cross-strand ladders control the structure and stability of beta-rich peptide self-assembly mimics
J.Mol.Biol., 383, 2008
2OY7
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BU of 2oy7 by Molmil
The crystal structure of OspA mutant
Descriptor: Outer surface protein A
Authors:Makabe, K, Terechko, V, Koide, A, Koide, S.
Deposit date:2007-02-21
Release date:2008-03-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Aromatic cross-strand ladders control the structure and stability of beta-rich peptide self-assembly mimics
J.Mol.Biol., 383, 2008
2OYB
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BU of 2oyb by Molmil
The crystal structure of OspA mutant
Descriptor: Outer surface protein A
Authors:Makabe, K, Biancalana, M, Terechko, V, Koide, S.
Deposit date:2007-02-21
Release date:2008-03-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Aromatic cross-strand ladders control the structure and stability of beta-rich peptide self-assembly mimics
J.Mol.Biol., 383, 2008
3AUM
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BU of 3aum by Molmil
Crystal structure of OspA mutant
Descriptor: Outer surface protein A
Authors:Makabe, K.
Deposit date:2011-02-10
Release date:2012-02-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Aromatic cluster mutations produce focal modulations of beta-sheet structure.
Protein Sci., 24, 2015

 

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PDB entries from 2024-03-27

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