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1B4M
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BU of 1b4m by Molmil
NMR STRUCTURE OF APO CELLULAR RETINOL-BINDING PROTEIN II, 24 STRUCTURES
Descriptor: CELLULAR RETINOL-BINDING PROTEIN II
Authors:Lu, J, Lin, C.-L, Tang, C, Ponder, J.W, Kao, J.L.F, Cistola, D.P, Li, E.
Deposit date:1998-12-23
Release date:1999-04-27
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:The structure and dynamics of rat apo-cellular retinol-binding protein II in solution: comparison with the X-ray structure.
J.Mol.Biol., 286, 1999
4URM
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BU of 4urm by Molmil
Crystal Structure of Staph GyraseB 24kDa in complex with Kibdelomycin
Descriptor: (1R,4aS,5S,6S,8aR)-5-{[(5S)-1-(3-O-acetyl-4-O-carbamoyl-6-deoxy-2-O-methyl-alpha-L-talopyranosyl)-4-hydroxy-2-oxo-5-(propan-2-yl)-2,5-dihydro-1H-pyrrol-3-yl]carbonyl}-6-methyl-4-methylidene-1,2,3,4,4a,5,6,8a-octahydronaphthalen-1-yl 2,6-dideoxy-3-C-[(1S)-1-{[(3,4-dichloro-5-methyl-1H-pyrrol-2-yl)carbonyl]amino}ethyl]-beta-D-ribo-hexopyranoside, DNA GYRASE SUBUNIT B
Authors:Lu, J, Patel, S, Sharma, N, Soisson, S, Kishii, R, Takei, M, Fukuda, Y, Lumb, K.J, Singh, S.B.
Deposit date:2014-06-30
Release date:2014-07-30
Last modified:2014-10-01
Method:X-RAY DIFFRACTION (2.94 Å)
Cite:Structures of Kibdelomycin Bound to Staphylococcus Aureus Gyrb and Pare Showed a Novel U-Shaped Binding Mode.
Acs Chem.Biol., 9, 2014
4URL
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Crystal Structure of Staph ParE43kDa in complex with KBD
Descriptor: (1R,4aS,5S,6S,8aR)-5-{[(5S)-1-(3-O-acetyl-4-O-carbamoyl-6-deoxy-2-O-methyl-alpha-L-talopyranosyl)-4-hydroxy-2-oxo-5-(propan-2-yl)-2,5-dihydro-1H-pyrrol-3-yl]carbonyl}-6-methyl-4-methylidene-1,2,3,4,4a,5,6,8a-octahydronaphthalen-1-yl 2,6-dideoxy-3-C-[(1S)-1-{[(3,4-dichloro-5-methyl-1H-pyrrol-2-yl)carbonyl]amino}ethyl]-beta-D-ribo-hexopyranoside, DNA TOPOISOMERASE IV, B SUBUNIT
Authors:Lu, J, Patel, S, Sharma, N, Soisson, S, Kishii, R, Takei, M, Fukuda, Y, Lumb, K.J, Singh, S.B.
Deposit date:2014-06-30
Release date:2014-07-16
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Structures of Kibdelomycin Bound to Staphylococcus Aureus Gyrb and Pare Showed a Novel U-Shaped Binding Mode.
Acs Chem.Biol., 9, 2014
4URN
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BU of 4urn by Molmil
Crystal Structure of Staph ParE 24kDa in complex with Novobiocin
Descriptor: DNA TOPOISOMERASE IV, B SUBUNIT, NOVOBIOCIN
Authors:Lu, J, Patel, S, Sharma, N, Soisson, S, Kishii, R, Takei, M, Fukuda, Y, Lumb, K.J, Singh, S.B.
Deposit date:2014-07-01
Release date:2014-07-16
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of Kibdelomycin Bound to Staphylococcus Aureus Gyrb and Pare Showed a Novel U-Shaped Binding Mode.
Acs Chem.Biol., 9, 2014
4URO
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BU of 4uro by Molmil
Crystal Structure of Staph GyraseB 24kDa in complex with Novobiocin
Descriptor: DNA GYRASE SUBUNIT B, NOVOBIOCIN
Authors:Lu, J, Patel, S, Sharma, N, Soisson, S, Kishii, R, Takei, M, Fukuda, Y, Lumb, K.J, Singh, S.B.
Deposit date:2014-07-01
Release date:2014-07-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Structures of Kibdelomycin Bound to Staphylococcus Aureus Gyrb and Pare Showed a Novel U-Shaped Binding Mode.
Acs Chem.Biol., 9, 2014
2CJS
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BU of 2cjs by Molmil
Structural Basis for a Munc13-1 Homodimer - Munc13-1 - RIM Heterodimer Switch: C2-domains as Versatile Protein-Protein Interaction Modules
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, REGULATING SYNAPTIC MEMBRANE EXOCYTOSIS PROTEIN 2, ...
Authors:Lu, J, Machius, M, Dulubova, I, Dai, H, Sudhof, T.C, Tomchick, D.R, Rizo, J.
Deposit date:2006-04-06
Release date:2006-06-07
Last modified:2019-01-30
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Structural Basis for a Munc13-1 Homodimer to Munc13-1/Rim Heterodimer Switch.
Plos Biol., 4, 2006
2CJT
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BU of 2cjt by Molmil
Structural Basis for a Munc13-1 Homodimer - Munc13-1 - RIM Heterodimer Switch: C2-domains as Versatile Protein-Protein Interaction Modules
Descriptor: 1,2-ETHANEDIOL, FORMIC ACID, UNC-13 HOMOLOG A
Authors:Lu, J, Machius, M, Dulubova, I, Dai, H, Sudhof, T.C, Tomchick, D.R, Rizo, J.
Deposit date:2006-04-06
Release date:2006-06-07
Last modified:2019-01-30
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:Structural Basis for a Munc13-1 Dimeric to Munc13-1/Rim Heterodimer Switch
Plos Biol., 4, 2006
4X4M
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BU of 4x4m by Molmil
Structure of FcgammaRI in complex with Fc reveals the importance of glycan recognition for high affinity IgG binding
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Lu, J, Sun, P.D.
Deposit date:2014-12-03
Release date:2015-04-08
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.485 Å)
Cite:Structure of Fc gamma RI in complex with Fc reveals the importance of glycan recognition for high-affinity IgG binding.
Proc.Natl.Acad.Sci.USA, 112, 2015
5K6E
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BU of 5k6e by Molmil
Crystal structure of Retinoic acid receptor-related orphan receptor (ROR) gamma ligand binding domain complex with SBI0654919
Descriptor: 2-chloranyl-6-fluoranyl-~{N}-[(2~{R})-4-(4-fluorophenyl)sulfonyl-2-(hydroxymethyl)-2,3-dihydro-1,4-benzoxazin-6-yl]benzamide, Nuclear receptor ROR-gamma
Authors:Lu, J, Rastinejad, F.
Deposit date:2016-05-24
Release date:2017-05-31
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of Retinoic acid receptor-related orphan receptor (ROR) gamma ligand binding domain complex with SBI0654919
To be published
4R3Q
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BU of 4r3q by Molmil
Crystal structure of SYCE3
Descriptor: Synaptonemal complex central element protein 3
Authors:Lu, J, Feng, J, Zhou, W, Yang, X, Shen, Y.
Deposit date:2014-08-17
Release date:2014-11-26
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.901 Å)
Cite:Structural insight into the central element assembly of the synaptonemal complex
Sci Rep, 4, 2014
1Z28
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BU of 1z28 by Molmil
Crystal Structures of SULT1A2 and SULT1A1*3: Implications in the bioactivation of N-hydroxy-2-acetylamino fluorine (OH-AAF)
Descriptor: ADENOSINE-3'-5'-DIPHOSPHATE, Phenol-sulfating phenol sulfotransferase 1
Authors:Lu, J, Li, H, Liu, M.C, Zhang, J, Li, M, An, X, Chang, W.
Deposit date:2005-03-07
Release date:2006-05-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures of SULT1A2 and SULT1A1 *3: insights into the substrate inhibition and the role of Tyr149 in SULT1A2.
Biochem.Biophys.Res.Commun., 396, 2010
1Z29
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BU of 1z29 by Molmil
Crystal Structures of SULT1A2 and SULT1A1*3: Implications in the bioactivation of N-hydroxy-2-acetylamino fluorine (OH-AAF)
Descriptor: ACETIC ACID, ADENOSINE-3'-5'-DIPHOSPHATE, CALCIUM ION, ...
Authors:Lu, J, Li, H, Liu, M.C, Zhang, J, Li, M, An, X, Chang, W.
Deposit date:2005-03-07
Release date:2006-05-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structures of SULT1A2 and SULT1A1 *3: insights into the substrate inhibition and the role of Tyr149 in SULT1A2.
Biochem.Biophys.Res.Commun., 396, 2010
1ZUB
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BU of 1zub by Molmil
Solution Structure of the RIM1alpha PDZ Domain in Complex with an ELKS1b C-terminal Peptide
Descriptor: ELKS1b, Regulating synaptic membrane exocytosis protein 1
Authors:Lu, J, Li, H, Wang, Y, Sudhof, T.C, Rizo, J.
Deposit date:2005-05-30
Release date:2005-08-30
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Solution Structure of the RIM1alpha PDZ Domain in Complex with an ELKS1b C-terminal Peptide
J.Mol.Biol., 352, 2005
5GXO
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BU of 5gxo by Molmil
Discovery of a compound that activates SIRT3 to deacetylate Manganese Superoxide Dismutase
Descriptor: MANGANESE (II) ION, Superoxide dismutase [Mn], mitochondrial
Authors:Lu, J, Li, J, Wu, M, Wang, J, Xia, Q.
Deposit date:2016-09-19
Release date:2017-08-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A small molecule activator of SIRT3 promotes deacetylation and activation of manganese superoxide dismutase.
Free Radic. Biol. Med., 112, 2017
1MX8
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BU of 1mx8 by Molmil
Two homologous rat cellular retinol-binding proteins differ in local structure and flexibility
Descriptor: CELLULAR RETINOL-BINDING PROTEIN I, HOLO, RETINOL
Authors:Lu, J, Cistola, D.P, Li, E.
Deposit date:2002-10-01
Release date:2003-07-29
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Two homologous rat cellular retinol-binding proteins differ in local conformational flexibility.
J.Mol.Biol., 330, 2003
1MX7
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BU of 1mx7 by Molmil
Two homologous rat cellular retinol-binding proteins differ in local structure and flexibility
Descriptor: CELLULAR RETINOL-BINDING PROTEIN I, APO
Authors:Lu, J, Cistola, D.P, Li, E.
Deposit date:2002-10-01
Release date:2003-07-29
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Two Homologous Rat Cellular Retinol-binding Proteins Differ in Local Conformational Flexibility.
J.Mol.Biol., 330, 2003
1EII
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BU of 1eii by Molmil
NMR STRUCTURE OF HOLO CELLULAR RETINOL-BINDING PROTEIN II
Descriptor: CELLULAR RETINOL-BINDING PROTEIN II, RETINOL
Authors:Lu, J, Lin, C.L, Tang, C, Ponder, J.W, Kao, J.L, Cistola, D.P, Li, E.
Deposit date:2000-02-25
Release date:2000-08-09
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Binding of retinol induces changes in rat cellular retinol-binding protein II conformation and backbone dynamics.
J.Mol.Biol., 300, 2000
1KMD
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BU of 1kmd by Molmil
SOLUTION STRUCTURE OF THE VAM7P PX DOMAIN
Descriptor: Vacuolar morphogenesis protein VAM7
Authors:Lu, J, Garcia, J, Dulubova, I, Sudhof, T.C, Rizo, J.
Deposit date:2001-12-14
Release date:2002-06-12
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Solution structure of the Vam7p PX domain.
Biochemistry, 41, 2002
6WQK
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BU of 6wqk by Molmil
hnRNPA2 Low complexity domain (LCD) determined by cryoEM
Descriptor: MCherry fluorescent protein,Heterogeneous nuclear ribonucleoproteins A2/B1 chimera
Authors:Lu, J, Cao, Q, Hughes, M.P, Sawaya, M.R, Boyer, D.R, Cascio, D, Eisenberg, D.S.
Deposit date:2020-04-29
Release date:2020-08-26
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:CryoEM structure of the low-complexity domain of hnRNPA2 and its conversion to pathogenic amyloid.
Nat Commun, 11, 2020
6WPQ
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BU of 6wpq by Molmil
GNYNVF from hnRNPA2-low complexity domain segment, residues 286-291, D290V variant
Descriptor: Heterogeneous nuclear ribonucleoprotein A2
Authors:Lu, J, Cao, Q, Hughes, M.P, Sawaya, M.R, Boyer, D.R, Cascio, D, Eisenberg, D.S.
Deposit date:2020-04-27
Release date:2020-08-19
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:CryoEM structure of the low-complexity domain of hnRNPA2 and its conversion to pathogenic amyloid.
Nat Commun, 11, 2020
6C68
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BU of 6c68 by Molmil
MHC-independent t cell receptor A11
Descriptor: T-cell receptor alpha chain, T-cell receptor beta chain
Authors:Lu, J, Van Laethem, F, Saba, I, Chu, J, Bhattacharya, A, Love, N.C, Tikhonova, A, Radaev, S, Sun, X, Ko, A, Arnon, T, Shifrut, E, Friedman, N, Weng, N, Singer, A, Sun, P.D.
Deposit date:2018-01-18
Release date:2019-01-30
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Structure of MHC-Independent TCRs and Their Recognition of Native Antigen CD155.
J Immunol., 204, 2020
3D5O
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BU of 3d5o by Molmil
Structural recognition and functional activation of FcrR by innate pentraxins
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Low affinity immunoglobulin gamma Fc region receptor II-a, ...
Authors:Lu, J, Marnell, L.L, Marjon, K.D, Mold, C, Du Clos, T.W, Sun, P.D.
Deposit date:2008-05-16
Release date:2008-11-11
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural recognition and functional activation of FcgammaR by innate pentraxins.
Nature, 456, 2008
5JQM
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BU of 5jqm by Molmil
Crystal Structure of Phosphatidic acid Transporter Ups1/Mdm35 Void of Bound Phospholipid from Saccharomyces Cerevisiae at 1.5 Angstroms Resolution
Descriptor: Protein UPS1, mitochondrial,Mitochondrial distribution and morphology protein 35
Authors:Lu, J, Chan, K.C, Zhai, Y, Fan, J, Sun, F.
Deposit date:2016-05-05
Release date:2017-07-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Molecular mechanism of mitochondrial phosphatidate transfer by Ups1
Commun Biol, 2020
5JQL
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Crystal Structure of Phosphatidic acid Transporter Ups1/Mdm35 Void of Bound Phospholipid from Saccharomyces Cerevisiae at 2.9 Angstroms Resolution
Descriptor: Mitochondrial distribution and morphology protein 35, Protein UPS1, mitochondrial
Authors:Lu, J, Chan, K.C, Zhai, Y, Fan, J, Sun, F.
Deposit date:2016-05-05
Release date:2017-07-12
Last modified:2020-09-02
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Molecular mechanism of mitochondrial phosphatidate transfer by Ups1
Commun Biol, 2020
8DJ7
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BU of 8dj7 by Molmil
The complex structure between human IgG1 Fc and its high affinity receptor FcgRI H174R variant
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, High affinity immunoglobulin gamma Fc receptor I, Ig gamma-1 Fc chain, ...
Authors:Lu, J, Sun, P.D.
Deposit date:2022-06-30
Release date:2023-05-10
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Fc gamma RI FG-loop functions as a pH sensitive switch for IgG binding and release.
Front Immunol, 14, 2023

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