Author results

1NEZ
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THE CRYSTAL STRUCTURE OF A TL/CD8AA COMPLEX AT 2.1A RESOLUTION:IMPLICATIONS FOR MEMORY T CELL GENERATION, CO-RECEPTOR PREFERENCE AND AFFINITY
Descriptor:H-2 class I histocompatibility antigen, TLA(C) alpha chain, Beta-2-microglobulin, ...
Authors:Liu, Y., Xiong, Y., Naidenko, O.V., Liu, J.H., Zhang, R., Joachimiak, A., Kronenberg, M., Cheroutre, H., Reinherz, E.L., Wang, J.H.
Deposit date:2002-12-12
Release date:2003-04-08
Last modified:2013-09-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The Crystal Structure of a TL/CD8alphaalpha Complex at 2.1 A resolution: Implications for modulation of T cell activation and memory
Immunity, 18, 2003
3A64
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CRYSTAL STRUCTURE OF CCCEL6C, A GLYCOSIDE HYDROLASE FAMILY 6 ENZYME, FROM COPRINOPSIS CINEREA
Descriptor:Cellobiohydrolase, MAGNESIUM ION
Authors:Liu, Y., Yoshida, M., Kurakata, Y., Miyazaki, T., Nishikawa, A., Tonozuka, T.
Deposit date:2009-08-21
Release date:2009-09-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of a glycoside hydrolase family 6 enzyme, CcCel6C, a cellulase constitutively produced by Coprinopsis cinerea
Febs J., 277, 2010
3GYO
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SE-MET RTT106P
Descriptor:Histone chaperone RTT106
Authors:Liu, Y., Huang, H., Shi, Y., Teng, M.
Deposit date:2009-04-04
Release date:2009-12-08
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural analysis of Rtt106p reveals a DNA-binding role required for heterochromatin silencing
J.Biol.Chem., 285, 2010
3GYP
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RTT106P
Descriptor:Histone chaperone RTT106, BETA-MERCAPTOETHANOL, CHLORIDE ION
Authors:Liu, Y., Huang, H., Shi, Y., Teng, M.
Deposit date:2009-04-04
Release date:2009-12-08
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.406 Å)
Cite:Structural analysis of Rtt106p reveals a DNA-binding role required for heterochromatin silencing
J.Biol.Chem., 285, 2010
5Z5K
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STRUCTURE OF THE DCC-DRAXIN COMPLEX
Descriptor:Netrin receptor DCC, Draxin, N-ACETYL-D-GLUCOSAMINE
Authors:Liu, Y., Xiao, J.
Deposit date:2018-01-18
Release date:2018-06-20
Method:X-RAY DIFFRACTION (2.493 Å)
Cite:Structural Basis for Draxin-Modulated Axon Guidance and Fasciculation by Netrin-1 through DCC.
Neuron, 97, 2018
1RIJ
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E6-BIND TRP-CAGE (E6APN1)
Descriptor:E6apn1 peptide
Authors:Liu, Y., Liu, Z., Androphy, E., Chen, J., Baleja, J.D.
Deposit date:2003-11-17
Release date:2004-08-03
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Design and characterization of helical peptides that inhibit the E6 protein of papillomavirus.
Biochemistry, 43, 2004
1RIK
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E6-BINDING ZINC FINGER (E6APC1)
Descriptor:E6apc1 peptide
Authors:Liu, Y., Liu, Z., Androphy, E., Chen, J., Baleja, J.D.
Deposit date:2003-11-17
Release date:2004-08-03
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Design and characterization of helical peptides that inhibit the E6 protein of papillomavirus.
Biochemistry, 43, 2004
1RIM
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E6-BINDING ZINC FINGER (E6APC2)
Descriptor:E6apc2 peptide
Authors:Liu, Y., Liu, Z., Androphy, E., Chen, J., Baleja, J.D.
Deposit date:2003-11-17
Release date:2004-08-03
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Design and characterization of helical peptides that inhibit the E6 protein of papillomavirus.
Biochemistry, 43, 2004
3A9B
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CCCEL6C, A GLYCOSIDE HYDROLASE FAMILY 6 ENZYME, COMPLEXED WITH CELLOBIOSE
Descriptor:Cellobiohydrolase, MAGNESIUM ION, BETA-D-GLUCOSE, ...
Authors:Liu, Y., Yoshida, M., Kurakata, Y., Miyazaki, T., Nishikawa, A., Tonozuka, T.
Deposit date:2009-10-22
Release date:2009-11-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Crystal structure of a glycoside hydrolase family 6 enzyme, CcCel6C, a cellulase constitutively produced by Coprinopsis cinerea
Febs J., 277, 2010
3ABX
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CCCEL6C, A GLYCOSIDE HYDROLASE FAMILY 6 ENZYME, COMPLEXED WITH P-NITROPHENYL BETA-D-CELLOTRIOSIDE
Descriptor:Cellobiohydrolase, MAGNESIUM ION, 4-nitrophenyl beta-D-glucopyranosyl-(1->4)-beta-D-glucopyranosyl-(1->4)-beta-D-glucopyranoside
Authors:Liu, Y., Yoshida, M., Kurakata, Y., Miyazaki, T., Nishikawa, A., Tonozuka, T.
Deposit date:2009-12-24
Release date:2010-01-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of a glycoside hydrolase family 6 enzyme, CcCel6C, a cellulase constitutively produced by Coprinopsis cinerea
Febs J., 277, 2010
3OIX
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CRYSTAL STRUCTURE OF THE PUTATIVE DIHYDROOROTATE DEHYDROGENASE FROM STREPTOCOCCUS MUTANS
Descriptor:Putative dihydroorotate dehydrogenase; dihydroorotate oxidase, FLAVIN MONONUCLEOTIDE, GLYCEROL
Authors:Liu, Y., Gao, Z.Q., Liu, C.P., Dong, Y.H.
Deposit date:2010-08-20
Release date:2010-09-08
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.399 Å)
Cite:Structure of the putative dihydroorotate dehydrogenase from Streptococcus mutans
Acta Crystallogr.,Sect.F, 67, 2011
5VEI
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CRYSTAL STRUCTURE OF THE SH3 DOMAIN OF HUMAN SORBIN AND SH3 DOMAIN-CONTAINING PROTEIN 2
Descriptor:Sorbin and SH3 domain-containing protein 2, UNKNOWN ATOM OR ION
Authors:Liu, Y., Tempel, W., Huang, H., Gu, J., Liu, K., Sidhu, S.S., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Min, J., Structural Genomics Consortium (SGC)
Deposit date:2017-04-04
Release date:2017-08-02
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Crystal structure of the SH3 domain of human sorbin and SH3 domain-containing protein 2
To be Published
1JS0
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CRYSTAL STRUCTURE OF 3D DOMAIN-SWAPPED RNASE A MINOR TRIMER
Descriptor:RIBONUCLEASE A, SULFATE ION
Authors:Liu, Y., Gotte, G., Libonati, M., Eisenberg, D.
Deposit date:2001-08-15
Release date:2002-03-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structures of the two 3D domain-swapped RNase A trimers.
Protein Sci., 11, 2002
5UHT
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STRUCTURE OF THE THERMOTOGA MARITIMA HK853-BEF3-RR468 COMPLEX AT PH 5.0
Descriptor:Sensor histidine kinase, Response regulator, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Liu, Y., Rose, J., Jiang, L., Zhou, P.
Deposit date:2017-01-12
Release date:2017-12-27
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:A pH-gated conformational switch regulates the phosphatase activity of bifunctional HisKA-family histidine kinases.
Nat Commun, 8, 2017
1C8J
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CRYSTAL STRUCTURE OF CYTOCHROME P450CAM MUTANT (F87W/Y96F)
Descriptor:CYTOCHROME P450-CAM, PROTOPORPHYRIN IX CONTAINING FE
Authors:Liu, Y., Jiang, F., Guo, Q., Chen, X., Jin, J., Sun, Y., Rao, Z.
Deposit date:2000-05-31
Release date:2001-05-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of Cytochrome P450cam mutant (F87W/Y96F)
To be Published
3LKX
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HUMAN NAC DIMERIZATION DOMAIN
Descriptor:Transcription factor BTF3, Nascent polypeptide-associated complex subunit alpha
Authors:Liu, Y., Hu, Y., Li, X., Niu, L., Teng, M.
Deposit date:2010-01-28
Release date:2010-03-23
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The crystal structure of the human nascent polypeptide-associated complex domain reveals a nucleic acid-binding region on the NACA subunit
Biochemistry, 49, 2010
3SEC
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CRYSTAL STRUCTURE OF METHANOTHERMOBACTER THERMAUTOTROPHICUS OROTIDINE 5'-MONOPHOSPHATE DECARBOXYLASE COMPLEXED WITH PYRAZOFURIN MONOPHOSPHATE
Descriptor:Orotidine 5'-phosphate decarboxylase, GLYCEROL, (1S)-1,4-anhydro-1-(5-carbamoyl-4-hydroxy-1H-pyrazol-3-yl)-5-O-phosphono-D-ribitol
Authors:Liu, Y., Kotra, L.P., Pai, E.F.
Deposit date:2011-06-10
Release date:2012-04-25
Last modified:2012-05-09
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of methanococcus thermolithotrophicus orotidine 5'-monophosphate decarboxylase complexed with pyrazofurin monophosphate
To be Published
4EHQ
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CRYSTAL STRUCTURE OF CALMODULIN BINDING DOMAIN OF ORAI1 IN COMPLEX WITH CA2+/CALMODULIN DISPLAYS A UNIQUE BINDING MODE
Descriptor:Calmodulin, Calcium release-activated calcium channel protein 1, CALCIUM ION, ...
Authors:Liu, Y., Zheng, X., Mueller, G.A., Sobhany, M., DeRose, E.F., Zhang, Y., London, R.E., Birnbaumer, L.
Deposit date:2012-04-03
Release date:2012-11-07
Last modified:2013-01-02
Method:X-RAY DIFFRACTION (1.9005 Å)
Cite:Crystal structure of calmodulin binding domain of orai1 in complex with ca2+*calmodulin displays a unique binding mode.
J.Biol.Chem., 287, 2012
4F7H
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THE CRYSTAL STRUCTURE OF KINDLIN-2 PLECKSTRIN HOMOLOGY DOMAIN IN FREE FORM
Descriptor:Fermitin family homolog 2, S,R MESO-TARTARIC ACID
Authors:Liu, Y., Zhu, Y., Qin, J., Ye, S., Zhang, R.
Deposit date:2012-05-16
Release date:2012-06-13
Last modified:2012-07-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of kindlin-2 PH domain reveals a conformational transition for its membrane anchoring and regulation of integrin activation.
Protein Cell, 3, 2012
4O6X
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CRYSTAL STRUCTURE OF HUMAN ANKYRIN G DEATH DOMAIN
Descriptor:Ankyrin-3
Authors:Liu, Y., Zhang, Y., Wang, J.H.
Deposit date:2013-12-24
Release date:2014-10-29
Last modified:2015-02-11
Method:X-RAY DIFFRACTION (2.103 Å)
Cite:Crystal structure of human Ankyrin G death domain.
Proteins, 82, 2014
4Q46
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THE SECOND STRUCTURE OF INFLUENZA B PB2 CAP-BINDING DOMAIN COMPLEX WITH GDP
Descriptor:Polymerase basic protein 2, GUANOSINE-5'-DIPHOSPHATE
Authors:Liu, Y., Yang, Y., Zheng, X.
Deposit date:2014-04-13
Release date:2015-02-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The Crystal Structure of the PB2 Cap-binding Domain of Influenza B Virus Reveals a Novel Cap Recognition Mechanism
J.Biol.Chem., 2015
4RR5
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THE CRYSTAL STRUCTURE OF SYNECHOCYSTIS SP. PCC 6803 MALONYL-COA: ACP TRANSACYLASE
Descriptor:Malonyl CoA-acyl carrier protein transacylase, ACETATE ION
Authors:Liu, Y.
Deposit date:2014-11-06
Release date:2015-07-01
Method:X-RAY DIFFRACTION (2.427 Å)
Cite:Structural and biochemical characterization of MCAT from photosynthetic microorganism Synechocystis sp. PCC 6803 reveal its stepwise catalytic mechanism
Biochem.Biophys.Res.Commun., 457, 2015
5DNY
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STRUCTURE OF THE ATPRS-MRE11/RAD50-DNA COMPLEX
Descriptor:DNA double-strand break repair protein Mre11, DNA double-strand break repair Rad50 ATPase,DNA double-strand break repair Rad50 ATPase, DNA (27-MER), ...
Authors:Liu, Y.
Deposit date:2015-09-10
Release date:2016-02-24
Last modified:2016-04-20
Method:X-RAY DIFFRACTION (3.11 Å)
Cite:ATP-dependent DNA binding, unwinding, and resection by the Mre11/Rad50 complex.
Embo J., 35, 2016
5F3W
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STRUCTURE OF THE ATPRS-MRE11/RAD50-DNA COMPLEX
Descriptor:DNA double-strand break repair protein Mre11, DNA double-strand break repair Rad50 ATPase,DNA double-strand break repair Rad50 ATPase, 27-MER DNA, ...
Authors:Liu, Y.
Deposit date:2015-12-03
Release date:2016-03-02
Last modified:2016-04-13
Method:X-RAY DIFFRACTION (3.11 Å)
Cite:ATP-dependent DNA binding, unwinding, and resection by the Mre11/Rad50 complex
Embo J., 35, 2016
5T1I
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CBX3 CHROMO SHADOW DOMAIN IN COMPLEX WITH HISTONE H3 PEPTIDE
Descriptor:Chromobox protein homolog 3, Histone H3.1, UNKNOWN ATOM OR ION
Authors:Liu, Y., Tempel, W., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Min, J., Structural Genomics Consortium (SGC)
Deposit date:2016-08-19
Release date:2016-09-14
Last modified:2017-04-19
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Peptide recognition by heterochromatin protein 1 (HP1) chromoshadow domains revisited: Plasticity in the pseudosymmetric histone binding site of human HP1.
J. Biol. Chem., 292, 2017