Author results

6M4J
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SSPA IN COMPLEX WITH CYSTEINE
Descriptor:SspA complex protein, PYRIDOXAL-5'-PHOSPHATE, CYSTEINE
Authors:Liu, L., Gao, H.
Deposit date:2020-03-07
Release date:2020-04-22
Last modified:2020-05-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Analysis of an l-Cysteine Desulfurase from an Ssp DNA Phosphorothioation System.
Mbio, 11, 2020
5ZNS
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INSECT CHITIN DEACETYLASE
Descriptor:chitin deacetylase, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Liu, L., Zhou, Y., Yang, Q.
Deposit date:2018-04-10
Release date:2019-02-20
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.396 Å)
Cite:Structural and biochemical insights into the catalytic mechanisms of two insect chitin deacetylases of the carbohydrate esterase 4 family.
J. Biol. Chem., 294, 2019
5ZNT
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INSECT CHITIN DEACETYLASE
Descriptor:chitin deacetylase, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ZINC ION, ...
Authors:Liu, L., Zhou, Y., Yang, Q.
Deposit date:2018-04-10
Release date:2019-02-20
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.979 Å)
Cite:Structural and biochemical insights into the catalytic mechanisms of two insect chitin deacetylases of the carbohydrate esterase 4 family.
J. Biol. Chem., 294, 2019
5WYB
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STRUCTURE OF PSEUDOMONAS AERUGINOSA DSPI
Descriptor:Probable enoyl-CoA hydratase/isomerase, (4R)-2-METHYLPENTANE-2,4-DIOL, ACETATE ION
Authors:Liu, L., Peng, C., Li, T., Li, C., He, L., Song, Y., Zhu, Y., Shen, Y., Bao, R.
Deposit date:2017-01-12
Release date:2018-01-17
Last modified:2019-08-14
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural and functional studies on Pseudomonas aeruginosa DspI: implications for its role in DSF biosynthesis.
Sci Rep, 8, 2018
3HH3
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NEW AZABORINE COMPOUNDS BIND TO THE T4 LYSOZYME L99A CAVITY - 1,2-DIHYDRO-1,2-AZABORINE
Descriptor:Lysozyme, 2-HYDROXYETHYL DISULFIDE, PHOSPHATE ION, ...
Authors:Liu, L., Matthews, B.W.
Deposit date:2009-05-14
Release date:2009-10-13
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Boron mimetics: 1,2-dihydro-1,2-azaborines bind inside a nonpolar cavity of T4 lysozyme.
Angew.Chem.Int.Ed.Engl., 48, 2009
3HH4
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NEW AZABORINE COMPOUNDS BIND TO THE T4 LYSOZYME L99A CAVITY - BENZENE AS CONTROL
Descriptor:Lysozyme, 2-HYDROXYETHYL DISULFIDE, PHOSPHATE ION, ...
Authors:Liu, L., Matthews, B.W.
Deposit date:2009-05-14
Release date:2009-10-13
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Boron mimetics: 1,2-dihydro-1,2-azaborines bind inside a nonpolar cavity of T4 lysozyme.
Angew.Chem.Int.Ed.Engl., 48, 2009
3HH5
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NEW AZABORINE COMPOUNDS BIND TO THE T4 LYSOZYME L99A CAVITY - 1-ETHYL-2-HYDRO-1,2-AZABORINE
Descriptor:Lysozyme, 2-HYDROXYETHYL DISULFIDE, SODIUM ION, ...
Authors:Liu, L., Matthews, B.W.
Deposit date:2009-05-14
Release date:2009-10-13
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Boron mimetics: 1,2-dihydro-1,2-azaborines bind inside a nonpolar cavity of T4 lysozyme.
Angew.Chem.Int.Ed.Engl., 48, 2009
3HH6
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NEW AZABORINE COMPOUNDS BIND TO THE T4 LYSOZYME L99A CAVITY -ETHYLBENZENE AS CONTROL
Descriptor:Lysozyme, 2-HYDROXYETHYL DISULFIDE, PHOSPHATE ION, ...
Authors:Liu, L., Matthews, B.W.
Deposit date:2009-05-14
Release date:2009-10-13
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Boron mimetics: 1,2-dihydro-1,2-azaborines bind inside a nonpolar cavity of T4 lysozyme.
Angew.Chem.Int.Ed.Engl., 48, 2009
5Z34
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THE STRUCTURE OF A CHITIN DEACETYLASE FROM BOMBYX MORI PROVIDE THE FIRST INSIGHT INTO INSECT CHITIN DEACETYLATION MECHANISM
Descriptor:Chitin deacetylase, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ZINC ION
Authors:Liu, L., Zhou, Y., Yang, Q.
Deposit date:2018-01-05
Release date:2019-02-20
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.399 Å)
Cite:The structure of a chitin deacetylase from Bombyx mori provide the first insight into insect chitin deacetylation mechanism
To Be Published
6JVZ
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RVD HA SPECIFICALLY CONTACTS 5MC THROUGH VAN DER WAALS INTERACTIONS
Descriptor:TAL effector, DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*(5CM)P*GP*CP*GP*TP*CP*TP*CP*T)-3'), DNA (5'-D(*AP*GP*AP*GP*AP*CP*GP*CP*GP*AP*AP*GP*GP*GP*AP*CP*A)-3')
Authors:Liu, L., Yi, C.
Deposit date:2019-04-18
Release date:2020-04-22
Last modified:2020-11-04
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Structural Insights into the Specific Recognition of 5-methylcytosine and 5-hydroxymethylcytosine by TAL Effectors.
J.Mol.Biol., 432, 2020
6JW0
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UNIVERSAL RVD R* ACCOMMODATES CYTOSINE VIA WATER-MEDIATED INTERACTIONS
Descriptor:TAL effector, DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*CP*GP*CP*GP*TP*CP*TP*CP*T)-3'), DNA (5'-D(*AP*GP*AP*GP*AP*CP*GP*CP*GP*AP*AP*GP*GP*GP*AP*CP*A)-3')
Authors:Liu, L., Yi, C.
Deposit date:2019-04-18
Release date:2020-04-22
Last modified:2020-11-04
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Insights into the Specific Recognition of 5-methylcytosine and 5-hydroxymethylcytosine by TAL Effectors.
J.Mol.Biol., 432, 2020
6JW1
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UNIVERSAL RVD R* ACCOMMODATES 5MC VIA WATER-MEDIATED INTERACTIONS
Descriptor:TAL effector, DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*(5CM)P*GP*CP*GP*TP*CP*TP*CP*T)-3'), DNA (5'-D(*AP*GP*AP*GP*AP*CP*GP*CP*GP*AP*AP*GP*GP*GP*AP*CP*A)-3')
Authors:Liu, L., Yi, C.
Deposit date:2019-04-18
Release date:2020-04-22
Last modified:2020-11-04
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Structural Insights into the Specific Recognition of 5-methylcytosine and 5-hydroxymethylcytosine by TAL Effectors.
J.Mol.Biol., 432, 2020
6JW2
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UNIVERSAL RVD R* ACCOMMODATES 5HMC VIA WATER-MEDIATED INTERACTIONS
Descriptor:TAL effector, DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*(5HC)P*GP*CP*GP*TP*CP*TP*CP*T)-3'), DNA (5'-D(*AP*GP*AP*GP*AP*CP*GP*CP*GP*AP*AP*GP*GP*GP*AP*CP*A)-3')
Authors:Liu, L., Yi, C.
Deposit date:2019-04-18
Release date:2020-04-22
Last modified:2020-11-04
Method:X-RAY DIFFRACTION (3.03 Å)
Cite:Structural Insights into the Specific Recognition of 5-methylcytosine and 5-hydroxymethylcytosine by TAL Effectors.
J.Mol.Biol., 432, 2020
6JW3
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DEGENERATE RVD RG FORMS A DISTINCT LOOP CONFORMATION
Descriptor:TAL effector, DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*(5CM)P*GP*CP*GP*TP*CP*TP*CP*T)-3'), DNA (5'-D(*AP*GP*AP*GP*AP*CP*GP*CP*GP*AP*AP*GP*GP*GP*AP*CP*A)-3')
Authors:Liu, L., Yi, C.
Deposit date:2019-04-18
Release date:2020-04-22
Last modified:2020-11-04
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural Insights into the Specific Recognition of 5-methylcytosine and 5-hydroxymethylcytosine by TAL Effectors.
J.Mol.Biol., 432, 2020
6JW4
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DEGENERATE RVD RG FORMS A DISTINCT LOOP CONFORMATION
Descriptor:TAL effector, DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*(5HC)P*GP*CP*GP*TP*CP*TP*CP*T)-3'), DNA (5'-D(*AP*GP*AP*GP*AP*CP*GP*CP*GP*AP*AP*GP*GP*GP*AP*CP*A)-3')
Authors:Liu, L., Yi, C.
Deposit date:2019-04-18
Release date:2020-04-22
Last modified:2020-11-04
Method:X-RAY DIFFRACTION (3.09 Å)
Cite:Structural Insights into the Specific Recognition of 5-methylcytosine and 5-hydroxymethylcytosine by TAL Effectors.
J.Mol.Biol., 432, 2020
6JW5
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RVD Q* RECOGNIZES 5HMC THROUGH WATER-MEDIATED H BONDS
Descriptor:TAL effector, DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*(5HC)P*GP*CP*GP*TP*CP*TP*CP*T)-3'), DNA (5'-D(*AP*GP*AP*GP*AP*CP*GP*CP*GP*AP*AP*GP*GP*GP*AP*CP*A)-3')
Authors:Liu, L., Yi, C.
Deposit date:2019-04-18
Release date:2020-04-22
Last modified:2020-11-04
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:Structural Insights into the Specific Recognition of 5-methylcytosine and 5-hydroxymethylcytosine by TAL Effectors.
J.Mol.Biol., 432, 2020
5WYD
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STRUCTURAL OF PSEUDOMONAS AERUGINOSA DSPI
Descriptor:Probable enoyl-CoA hydratase/isomerase, PENTANEDIAL, ISOPROPYL ALCOHOL, ...
Authors:Liu, L., Peng, C., Li, T., Li, C., He, L., Song, Y., Zhu, Y., Shen, Y., Bao, R.
Deposit date:2017-01-12
Release date:2018-01-31
Last modified:2019-08-14
Method:X-RAY DIFFRACTION (2.101 Å)
Cite:Structural and functional studies on Pseudomonas aeruginosa DspI: implications for its role in DSF biosynthesis.
Sci Rep, 8, 2018
5XWP
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CRYSTAL STRUCTURE OF LBUCAS13A-CRRNA-TARGET RNA TERNARY COMPLEX
Descriptor:Uncharacterized protein, RNA (59-MER), RNA (30-MER)
Authors:Liu, L., Li, X., Li, Z., Wang, Y.
Deposit date:2017-06-30
Release date:2017-09-13
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (3.086 Å)
Cite:The Molecular Architecture for RNA-Guided RNA Cleavage by Cas13a.
Cell, 170, 2017
1IU9
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CRYSTAL STRUCTURE OF THE C-TERMINAL DOMAIN OF ASPARTATE RACEMASE FROM PYROCOCCUS HORIKOSHII OT3
Descriptor:aspartate racemase, CALCIUM ION
Authors:Liu, L., Iwata, K., Yohda, M., Miki, K.
Deposit date:2002-02-28
Release date:2003-09-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Structural insight into gene duplication, gene fusion and domain swapping in the evolution of PLP-independent amino acid racemases
FEBS LETT., 528, 2002
1IUA
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ULTRA-HIGH RESOLUTION STRUCTURE OF HIPIP FROM THERMOCHROMATIUM TEPIDUM
Descriptor:High-potential iron-sulfur protein, SULFATE ION, IRON/SULFUR CLUSTER
Authors:Liu, L., Nogi, T., Kobayashi, M., Nozawa, T., Miki, K.
Deposit date:2002-03-01
Release date:2002-03-20
Last modified:2019-01-23
Method:X-RAY DIFFRACTION (0.8 Å)
Cite:Ultrahigh-resolution structure of high-potential iron-sulfur protein from Thermochromatium tepidum.
Acta Crystallogr.,Sect.D, 58, 2002
1T2L
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THREE CRYSTAL STRUCTURES OF HUMAN COACTOSIN-LIKE PROTEIN
Descriptor:Coactosin-like protein
Authors:Liu, L., Wei, Z., Chen, Z., Wang, Y., Gong, W.
Deposit date:2004-04-22
Release date:2004-11-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal Structure of Human Coactosin-like Protein
J.Mol.Biol., 344, 2004
1T3X
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THREE CRYSTAL STRUCTURES OF HUMAN COACTOSIN-LIKE PROTEIN
Descriptor:Coactosin-like protein
Authors:Liu, L., Wei, Z., Chen, Z., Wang, Y.
Deposit date:2004-04-28
Release date:2005-08-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Three Crystal Structures of Human Coactosin-like Protein
TO BE PUBLISHED
1T3Y
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THREE CRYSTAL STRUCTURES OF HUMAN COACTOSIN-LIKE PROTEIN
Descriptor:Coactosin-like protein
Authors:Liu, L., Wei, Z., Chen, Z., Wang, Y.
Deposit date:2004-04-28
Release date:2005-08-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Three Crystal Structures of Human Coactosin-like Protein
To be Published
2B3R
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CRYSTAL STRUCTURE OF THE C2 DOMAIN OF CLASS II PHOSPHATIDYLINOSITIDE 3-KINASE C2
Descriptor:Phosphatidylinositol-4-phosphate 3-kinase C2 domain-containing alpha polypeptide, SULFATE ION
Authors:Liu, L., Song, X., He, D., Komma, C., Kita, A., Verbasius, J.V., Bellamy, H., Miki, K., Czech, M.P., Zhou, G.W.
Deposit date:2005-09-20
Release date:2005-12-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the C2 domain of class II phosphatidylinositide 3-kinase C2alpha.
J.Biol.Chem., 281, 2006
2LQ6
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SOLUTION STRUCTURE OF BRD1 PHD2 FINGER
Descriptor:Bromodomain-containing protein 1, ZINC ION
Authors:Liu, L., Wu, J.
Deposit date:2012-02-25
Release date:2012-10-24
Method:SOLUTION NMR
Cite:Solution structure of an atypical PHD finger in BRPF2 and its interaction with DNA
J.Struct.Biol., 180, 2012
171313
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