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8SYP
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BU of 8syp by Molmil
Genomic CX3CR1 nucleosome
Descriptor: DNA (162-MER), Histone H2A type 2-C, Histone H2B type 2-E, ...
Authors:Lian, T, Guan, R, Bai, Y.
Deposit date:2023-05-25
Release date:2023-11-01
Last modified:2024-02-07
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Structural mechanism of synergistic targeting of the CX3CR1 nucleosome by PU.1 and C/EBP alpha.
Nat.Struct.Mol.Biol., 2024
8EVH
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BU of 8evh by Molmil
CX3CR1 nucleosome and wild type PU.1 complex
Descriptor: DNA (162-MER), Histone H2A type 2-C, Histone H2B type 2-E, ...
Authors:Lian, T, Guan, R, Bai, Y.
Deposit date:2022-10-20
Release date:2023-11-01
Last modified:2024-02-07
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:Structural mechanism of synergistic targeting of the CX3CR1 nucleosome by PU.1 and C/EBP alpha.
Nat.Struct.Mol.Biol., 2024
8EVI
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BU of 8evi by Molmil
CX3CR1 nucleosome and PU.1 complex containing disulfide bond mutations
Descriptor: DNA (167-MER), Histone H2A type 2-C, Histone H2B type 2-E, ...
Authors:Lian, T, Guan, R, Bai, Y.
Deposit date:2022-10-20
Release date:2023-11-01
Last modified:2024-02-07
Method:ELECTRON MICROSCOPY (2.64 Å)
Cite:Structural mechanism of synergistic targeting of the CX3CR1 nucleosome by PU.1 and C/EBP alpha.
Nat.Struct.Mol.Biol., 2024
5EMQ
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BU of 5emq by Molmil
Transcription factor GRDBD and GRE complex
Descriptor: DNA (5'-D(*CP*CP*AP*GP*AP*AP*CP*AP*TP*CP*AP*TP*GP*TP*TP*CP*TP*G)-3'), DNA (5'-D(*CP*CP*AP*GP*AP*AP*CP*AP*TP*GP*AP*TP*GP*TP*TP*CP*TP*G)-3'), Glucocorticoid receptor, ...
Authors:Lian, T, Jin, J, Su, X.
Deposit date:2015-11-06
Release date:2016-06-29
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The effects of cytosine methylation on general transcription factors
To Be Published
5EMP
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BU of 5emp by Molmil
Transcription factor GRDBD and mmGRE complex
Descriptor: DNA (5'-D(*CP*CP*AP*GP*AP*AP*CP*AP*TP*GP*AP*TP*GP*TP*TP*CP*TP*G)-3'), DNA (5'-D(P*CP*CP*AP*GP*AP*AP*CP*AP*TP*(5CM)P*AP*TP*GP*TP*TP*CP*TP*G)-3'), Glucocorticoid receptor, ...
Authors:Lian, T, Jin, J, Su, X.
Deposit date:2015-11-06
Release date:2016-06-29
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The effects of cytosine methylation on general transcription factors
To Be Published
8DK5
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BU of 8dk5 by Molmil
Structure of 187bp LIN28b nucleosome with site 0 mutation
Descriptor: DNA (187-MER), Histone H2A type 2-C, Histone H2B type 2-E, ...
Authors:Lian, T, Guan, R, Bai, Y.
Deposit date:2022-07-02
Release date:2023-06-28
Method:ELECTRON MICROSCOPY (2.71 Å)
Cite:Structural mechanism of LIN28B nucleosome targeting by OCT4.
Mol.Cell, 83, 2023
8SPS
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BU of 8sps by Molmil
High resolution structure of ESRRB nucleosome bound OCT4 at site a and site b
Descriptor: DNA (168-MER), Histone H2A type 2-C, Histone H2B type 2-E, ...
Authors:Lian, T, Guan, R, Bai, Y.
Deposit date:2023-05-03
Release date:2023-06-28
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural mechanism of LIN28B nucleosome targeting by OCT4.
Mol.Cell, 83, 2023
8SPU
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BU of 8spu by Molmil
Structure of ESRRB nucleosome bound OCT4 at site c
Descriptor: DNA (168-MER), Histone H2A type 2-C, Histone H2B type 2-E, ...
Authors:Lian, T, Guan, R, Bai, Y.
Deposit date:2023-05-03
Release date:2023-06-28
Last modified:2024-02-07
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural mechanism of LIN28B nucleosome targeting by OCT4.
Mol.Cell, 83, 2023
8EVJ
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BU of 8evj by Molmil
CX3CR1 nucleosome bound PU.1 and C/EBPa
Descriptor: DNA (167-MER), Histone H2A type 2-C, Histone H2B type 2-E, ...
Authors:Guan, R, Bai, Y, Lian, T.
Deposit date:2022-10-20
Release date:2023-11-01
Last modified:2024-02-07
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structural mechanism of synergistic targeting of the CX3CR1 nucleosome by PU.1 and C/EBP alpha.
Nat.Struct.Mol.Biol., 2024
7U0J
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BU of 7u0j by Molmil
Structure of 162bp LIN28b nucleosome
Descriptor: DNA (162-MER), Histone H2A type 2-C, Histone H2B type 2-E, ...
Authors:Lian, T, Guan, R, Bai, Y.
Deposit date:2022-02-18
Release date:2023-06-28
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structural mechanism of LIN28B nucleosome targeting by OCT4.
Mol.Cell, 83, 2023
7U0G
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BU of 7u0g by Molmil
structure of LIN28b nucleosome bound 3 OCT4
Descriptor: DNA (162-MER), Histone H2A type 2-C, Histone H2B type 2-E, ...
Authors:Lian, T, Guan, R, Bai, Y.
Deposit date:2022-02-18
Release date:2023-06-28
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Structural mechanism of LIN28B nucleosome targeting by OCT4.
Mol.Cell, 83, 2023
6WQZ
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BU of 6wqz by Molmil
Structure of human ATG9A, the only transmembrane protein of the core autophagy machinery
Descriptor: Autophagy-related protein 9A, Lauryl Maltose Neopentyl Glycol
Authors:Guardia, C.M, Tan, X, Lian, T, Rana, M.S, Zhou, W, Christenson, E.T, Lowry, A.J, Faraldo-Gomez, J.D, Bonifacino, J.S, Jiang, J, Banerjee, A.
Deposit date:2020-04-29
Release date:2020-07-08
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structure of Human ATG9A, the Only Transmembrane Protein of the Core Autophagy Machinery.
Cell Rep, 31, 2020
6WR4
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BU of 6wr4 by Molmil
Structure of human ATG9A, the only transmembrane protein of the core autophagy machinery
Descriptor: Autophagy-related protein 9A, Lauryl Maltose Neopentyl Glycol
Authors:Guardia, C.M, Tan, X, Lian, T, Rana, M.S, Zhou, W, Christenson, E.T, Lowry, A.J, Faraldo-Gomez, J.D, Bonifacino, J.S, Jiang, J, Banerjee, A.
Deposit date:2020-04-29
Release date:2020-07-08
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structure of Human ATG9A, the Only Transmembrane Protein of the Core Autophagy Machinery.
Cell Rep, 31, 2020
7RHQ
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BU of 7rhq by Molmil
Cryo-EM structure of Xenopus Patched-1 in complex with GAS1 and Sonic Hedgehog
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Huang, P, Lian, T, Wierbowski, B, Garcia-Linares, S, Jiang, J, Salic, A.
Deposit date:2021-07-18
Release date:2022-03-02
Last modified:2022-03-23
Method:ELECTRON MICROSCOPY (3.53 Å)
Cite:Structural basis for catalyzed assembly of the Sonic hedgehog-Patched1 signaling complex.
Dev.Cell, 57, 2022
7RHR
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BU of 7rhr by Molmil
Cryo-EM structure of Xenopus Patched-1 in nanodisc
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, ...
Authors:Huang, P, Lian, T, Jiang, J, Salic, A.
Deposit date:2021-07-18
Release date:2022-03-02
Last modified:2022-03-23
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural basis for catalyzed assembly of the Sonic hedgehog-Patched1 signaling complex.
Dev.Cell, 57, 2022
5EMC
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BU of 5emc by Molmil
Transcription factor GRDBD and smGRE complex
Descriptor: DNA (5'-D(*CP*CP*AP*GP*AP*AP*(5CM)P*AP*TP*CP*AP*TP*GP*TP*TP*(5CM)P*TP*G)-3'), DNA (5'-D(*CP*CP*AP*GP*AP*AP*(5CM)P*AP*TP*GP*AP*TP*GP*TP*TP*(5CM)P*TP*G)-3'), Glucocorticoid receptor, ...
Authors:Su, X.D, Lian, T, Jin, J.
Deposit date:2015-11-06
Release date:2016-06-29
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The effects of cytosine methylation on general transcription factors
To Be Published
5WF5
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BU of 5wf5 by Molmil
Agonist bound human A2a adenosine receptor with D52N mutation at 2.60 A resolution
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 6-(2,2-diphenylethylamino)-9-[(2R,3R,4S,5S)-5-(ethylcarbamoyl)-3,4-dihydroxy-oxolan-2-yl]-N-[2-[(1-pyridin-2-ylpiperidin-4-yl)carbamoylamino]ethyl]purine-2-carboxamide, Human A2a adenosine receptor T4L chimera
Authors:White, K.L, Eddy, M.T, Gao, Z, Han, G.W, Hanson, M.A, Lian, T, Deary, A, Patel, N, Jacobson, K.A, Katritch, V, Stevens, R.C.
Deposit date:2017-07-11
Release date:2018-02-21
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Connection between Activation Microswitch and Allosteric Sodium Site in GPCR Signaling.
Structure, 26, 2018
5WF6
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BU of 5wf6 by Molmil
Agonist bound human A2a adenosine receptor with S91A mutation at 2.90 A resolution
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 6-(2,2-diphenylethylamino)-9-[(2R,3R,4S,5S)-5-(ethylcarbamoyl)-3,4-dihydroxy-oxolan-2-yl]-N-[2-[(1-pyridin-2-ylpiperidin-4-yl)carbamoylamino]ethyl]purine-2-carboxamide, Human A2a adenosine receptor T4L chimera
Authors:White, K.L, Eddy, M.T, Gao, Z, Han, G.W, Hanson, M.A, Lian, T, Deary, A, Patel, N, Jacobson, K.A, Katritch, V, Stevens, R.C.
Deposit date:2017-07-11
Release date:2018-02-21
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural Connection between Activation Microswitch and Allosteric Sodium Site in GPCR Signaling.
Structure, 26, 2018
5GNJ
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BU of 5gnj by Molmil
Structure of a transcription factor and DNA complex
Descriptor: DNA (5'-D(*AP*GP*GP*AP*AP*CP*AP*CP*GP*TP*GP*AP*CP*CP*C)-3'), DNA (5'-D(*TP*GP*GP*GP*TP*CP*AP*CP*GP*TP*GP*TP*TP*CP*C)-3'), Transcription factor MYC2
Authors:Lian, T, Xu, Y, Su, X.
Deposit date:2016-07-21
Release date:2017-05-10
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal Structure of Tetrameric Arabidopsis MYC2 Reveals the Mechanism of Enhanced Interaction with DNA.
Cell Rep, 19, 2017
8SDU
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BU of 8sdu by Molmil
Structure of rat organic anion transporter 1 (OAT1)
Descriptor: Solute carrier family 22 member 6
Authors:Dou, T, Jiang, J.
Deposit date:2023-04-07
Release date:2023-10-18
Last modified:2023-11-22
Method:ELECTRON MICROSCOPY (2.05 Å)
Cite:The substrate and inhibitor binding mechanism of polyspecific transporter OAT1 revealed by high-resolution cryo-EM.
Nat.Struct.Mol.Biol., 30, 2023
8SDZ
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BU of 8sdz by Molmil
Structure of rat organic anion transporter 1 (OAT1) in complex with probenecid
Descriptor: 4-(dipropylsulfamoyl)benzoic acid, Solute carrier family 22 member 6
Authors:Dou, T, Jiang, J.
Deposit date:2023-04-07
Release date:2023-10-18
Last modified:2023-11-22
Method:ELECTRON MICROSCOPY (2.86 Å)
Cite:The substrate and inhibitor binding mechanism of polyspecific transporter OAT1 revealed by high-resolution cryo-EM.
Nat.Struct.Mol.Biol., 30, 2023
8SDY
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BU of 8sdy by Molmil
Structure of rat organic anion transporter 1 (OAT1) in complex with para-aminohippuric acid (PAH)
Descriptor: N-(4-aminobenzoyl)glycine, Solute carrier family 22 member 6
Authors:Dou, T, Jiang, J.
Deposit date:2023-04-07
Release date:2023-10-18
Last modified:2023-11-22
Method:ELECTRON MICROSCOPY (2.79 Å)
Cite:The substrate and inhibitor binding mechanism of polyspecific transporter OAT1 revealed by high-resolution cryo-EM.
Nat.Struct.Mol.Biol., 30, 2023
7U0I
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BU of 7u0i by Molmil
Structure of LIN28b nucleosome bound 2 OCT4
Descriptor: DNA (162-MER), Histone H2A type 2-C, Histone H2B type 2-E, ...
Authors:Tengfei, L, Guan, R, Bai, Y.
Deposit date:2022-02-18
Release date:2023-06-28
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Structural mechanism of LIN28B nucleosome targeting by OCT4.
Mol.Cell, 83, 2023
7JGG
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BU of 7jgg by Molmil
Cryo-EM structure of P. falciparum VAR2CSA NF45 DBL5 and DBL6 domains at 4.88 A
Descriptor: Erythrocyte membrane protein 1
Authors:Ma, R, Tolia, N.H.
Deposit date:2020-07-19
Release date:2021-01-13
Last modified:2021-03-10
Method:ELECTRON MICROSCOPY (4.88 Å)
Cite:Structural basis for placental malaria mediated by Plasmodium falciparum VAR2CSA.
Nat Microbiol, 6, 2021
7JGF
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BU of 7jgf by Molmil
Cryo-EM structure of P. falciparum VAR2CSA FCR3 domains DBL5 and DBL6 at 4.69 A
Descriptor: Erythrocyte membrane protein 1
Authors:Ma, R, Tolia, N.H.
Deposit date:2020-07-19
Release date:2021-01-13
Last modified:2021-03-10
Method:ELECTRON MICROSCOPY (4.69 Å)
Cite:Structural basis for placental malaria mediated by Plasmodium falciparum VAR2CSA.
Nat Microbiol, 6, 2021

 

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PDB entries from 2024-04-17

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