Author results

1KGE
  • Download 1kge
  • View 1kge
Molmil generated image of 1kge
STRUCTURE OF BETA-LACTAMASE ASN 170 MET MUTANT
Descriptor:BETA-LACTAMASE
Authors:Chen, C.C.H., Zawadzke, L.E., Herzberg, O.
Deposit date:1996-10-17
Release date:1997-04-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Elimination of the hydrolytic water molecule in a class A beta-lactamase mutant: crystal structure and kinetics.
Biochemistry, 35, 1996
1KGF
  • Download 1kgf
  • View 1kgf
Molmil generated image of 1kgf
STRUCTURE OF BETA-LACTAMASE ASN 170 GLN MUTANT
Descriptor:BETA-LACTAMASE
Authors:Chen, C.C.H., Zawadzke, L.E., Herzberg, O.
Deposit date:1996-10-17
Release date:1997-03-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Elimination of the hydrolytic water molecule in a class A beta-lactamase mutant: crystal structure and kinetics.
Biochemistry, 35, 1996
1ALQ
  • Download 1alq
  • View 1alq
Molmil generated image of 1alq
CIRCULARLY PERMUTED BETA-LACTAMASE FROM STAPHYLOCOCCUS AUREUS PC1
Descriptor:CP254 BETA-LACTAMASE, SULFATE ION, CARBONATE ION
Authors:Pieper, U., Herzberg, O.
Deposit date:1997-06-02
Release date:1997-09-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Circularly permuted beta-lactamase from Staphylococcus aureus PC1.
Biochemistry, 36, 1997
4ZNB
  • Download 4znb
  • View 4znb
Molmil generated image of 4znb
METALLO-BETA-LACTAMASE (C181S MUTANT)
Descriptor:METALLO-BETA-LACTAMASE, ZINC ION, SODIUM ION
Authors:Li, Z., Herzberg, O.
Deposit date:1998-10-20
Release date:1999-06-08
Last modified:2018-03-07
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural consequences of the active site substitution Cys181 --> Ser in metallo-beta-lactamase from Bacteroides fragilis.
Protein Sci., 8, 1999
1PYM
  • Download 1pym
  • View 1pym
Molmil generated image of 1pym
PHOSPHOENOLPYRUVATE MUTASE FROM MOLLUSK IN WITH BOUND MG2-OXALATE
Descriptor:PROTEIN (PHOSPHOENOLPYRUVATE MUTASE), OXALATE ION, MAGNESIUM ION
Authors:Huang, K., Li, Z., Herzberg, O.
Deposit date:1999-02-25
Release date:1999-07-21
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Helix swapping between two alpha/beta barrels: crystal structure of phosphoenolpyruvate mutase with bound Mg(2+)-oxalate.
Structure Fold.Des., 7, 1999
1QBY
  • Download 1qby
  • View 1qby
Molmil generated image of 1qby
THE SOLUTION STRUCTURE OF A BAY-REGION 1R-BENZ[A]ANTHRACENE OXIDE ADDUCT AT THE N6 POSITION OF ADENINE OF AN OLIGODEOXYNUCLEOTIDE CONTAINING THE HUMAN N-RAS CODON 61 SEQUENCE
Descriptor:5'-D(*CP*GP*GP*AP*CP*(BZA)AP*AP*GP*AP*AP*G)-3', 5'-D(*CP*TP*TP*CP*TP*TP*GP*TP*CP*CP* G)-3', 1R,2S,3R,4S-TETRAHYDRO-BENZO[A]ANTHRACENE-2,3,4-TRIOL
Authors:Li, Z., Mao, H., Kim, H.-Y., Tamura, P.J., Harris, C.M., Harris, T.M., Stone, M.P.
Deposit date:1999-04-27
Release date:1999-05-06
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Intercalation of the (-)-(1R,2S,3R, 4S)-N6-[1-benz[a]anthracenyl]-2'-deoxyadenosyl adduct in an oligodeoxynucleotide containing the human N-ras codon 61 sequence.
Biochemistry, 38, 1999
1DBU
  • Download 1dbu
  • View 1dbu
Molmil generated image of 1dbu
CRYSTAL STRUCTURE OF CYSTEINYL-TRNA(PRO) DEACYLASE PROTEIN FROM H. INFLUENZAE (HI1434)
Descriptor:cysteinyl-tRNA(Pro) deacylase, MERCURY (II) ION
Authors:Zhang, H., Huang, K., Li, Z., Herzberg, O., Structure 2 Function Project (S2F)
Deposit date:1999-11-03
Release date:2000-06-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of YbaK protein from Haemophilus influenzae (HI1434) at 1.8 A resolution: functional implications.
Proteins, 40, 2000
1DBX
  • Download 1dbx
  • View 1dbx
Molmil generated image of 1dbx
CRYSTAL STRUCTURE OF CYSTEINYL-TRNA(PRO) DEACYLASE FROM H. INFLUENZAE (HI1434)
Descriptor:cysteinyl-tRNA(Pro) deacylase
Authors:Zhang, H., Huang, K., Li, Z., Herzberg, O., Structure 2 Function Project (S2F)
Deposit date:1999-11-03
Release date:2000-06-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of YbaK protein from Haemophilus influenzae (HI1434) at 1.8 A resolution: functional implications.
Proteins, 40, 2000
1DJD
  • Download 1djd
  • View 1djd
Molmil generated image of 1djd
THE SOLUTION STRUCTURE OF A NON-BAY REGION 11R-BENZ[A]ANTHRACENE OXIDE ADDUCT AT THE N6 POSITION OF ADENINE OF AN OLIGODEOXYNUCLEOTIDE CONTAINING THE HUMAN N-RAS CODON 61 SEQUENCE
Descriptor:DNA(5'-D(*CT*GT*GT*AT*CT*AT*AT*GT*AT*AT*G)-3'), DNA(5'-D(*CT*TT*TT*CT*TT*TT*GT*TT*CT*CT*G)-3'), 8,9,10,11-TETRAHYDRO-BENZO[A]ANTHRACENE-8,9,10-TRIOL
Authors:Li, Z., Kim, H.Y., Tamura, P.J., Harris, C.M., Harris, T.M., Stone, M.P.
Deposit date:1999-12-02
Release date:1999-12-16
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Role of a polycyclic aromatic hydrocarbon bay region ring in modulating DNA adduct structure: the non-bay region (8S,9R,10S, 11R)-N(6)-[11-(8,9,10,11-tetrahydro-8,9, 10-trihydroxybenz[a]anthracenyl)]-2' -deoxyadenosyl adduct in codon 61 of the human N-ras protooncogene
Biochemistry, 38, 1999
1DL4
  • Download 1dl4
  • View 1dl4
Molmil generated image of 1dl4
THE SOLUTION STRUCTURE OF A BAY-REGION 1S-BENZ[A]ANTHRACENE OXIDE ADDUCT AT THE N6 POSITION OF ADENINE OF AN OLIGODEOXYNUCLEOTIDE CONTAINING THE HUMAN N-RAS CODON 61 SEQUENCE
Descriptor:DNA (5'-D(*CP*GP*GP*AP*CP*(BZA)AP*AP*GP*AP*AP*G)-3'), DNA (5'-D(*CP*TP*TP*CP*TP*TP*GP*TP*CP*CP*G)-3'), 1R,2S,3R,4S-TETRAHYDRO-BENZO[A]ANTHRACENE-2,3,4-TRIOL
Authors:Li, Z., Kim, H.-Y., Tamura, P.J., Harris, C.M., Harris, T.M., Stone, M.P.
Deposit date:1999-12-08
Release date:2000-01-12
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Intercalation of the (1S,2R,3S,4R)-N6-[1-(1,2,3,4-tetrahydro-2,3, 4-trihydroxybenz[a]anthracenyl)]-2'-deoxyadenosyl adduct in an oligodeoxynucleotide containing the human N-ras codon 61 sequence.
Biochemistry, 38, 1999
1FJ4
  • Download 1fj4
  • View 1fj4
Molmil generated image of 1fj4
THE STRUCTURE OF BETA-KETOACYL-[ACYL CARRIER PROTEIN] SYNTHASE I IN COMPLEX WITH THIOLACTOMYCIN, IMPLICATIONS FOR DRUG DESIGN
Descriptor:BETA-KETOACYL-[ACYL CARRIER PROTEIN] SYNTHASE I, THIOLACTOMYCIN
Authors:Price, A.C., Choi, K., Heath, R.J., Li, Z., White, S.W., Rock, C.O.
Deposit date:2000-08-07
Release date:2000-08-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Inhibition of beta-ketoacyl-acyl carrier protein synthases by thiolactomycin and cerulenin. Structure and mechanism.
J.Biol.Chem., 276, 2001
1FJ8
  • Download 1fj8
  • View 1fj8
Molmil generated image of 1fj8
THE STRUCTURE OF BETA-KETOACYL-[ACYL CARRIER PROTEIN] SYNTHASE I IN COMPLEX WITH CERULENIN, IMPLICATIONS FOR DRUG DESIGN
Descriptor:BETA-KETOACYL-[ACYL CARRIER PROTEIN] SYNTHASE I, (2S, 3R)-3-HYDROXY-4-OXO-7,10-TRANS,TRANS-DODECADIENAMIDE
Authors:Price, A.C., Choi, K., Heath, R.J., Li, Z., White, S.W., Rock, C.O.
Deposit date:2000-08-07
Release date:2000-08-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Inhibition of beta-ketoacyl-acyl carrier protein synthases by thiolactomycin and cerulenin. Structure and mechanism.
J.Biol.Chem., 276, 2001
1GGO
  • Download 1ggo
  • View 1ggo
Molmil generated image of 1ggo
T453A MUTANT OF PYRUVATE, PHOSPHATE DIKINASE
Descriptor:PROTEIN (PYRUVATE, PHOSPHATE DIKINASE), SULFATE ION
Authors:Li, Z., Herzberg, O.
Deposit date:2000-08-29
Release date:2001-01-10
Last modified:2018-06-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Identification of domain-domain docking sites within Clostridium symbiosum pyruvate phosphate dikinase by amino acid replacement.
J.Biol.Chem., 275, 2000
1FT4
  • Download 1ft4
  • View 1ft4
Molmil generated image of 1ft4
PHOTOCHEMICALLY-ENHANCED BINDING OF SMALL MOLECULES TO THE TUMOR NECROSIS FACTOR RECEPTOR-1
Descriptor:SOLUBLE TUMOR NECROSIS FACTOR RECEPTOR 1, 5-(3-MORPHOLIN-4-YL-PROPYL)-2-(3-NITRO-PHENYL)-4-THIOXO-4,5-DIHYDRO-1-THIA-3B,5-DIAZA-CYCLOPENTA[A]PENTALEN-6-ONE
Authors:Muckelbauer, J.K., Chang, C.-H.
Deposit date:2000-09-11
Release date:2001-10-12
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Photochemically enhanced binding of small molecules to the tumor necrosis factor receptor-1 inhibits the binding of TNF-alpha.
Proc.Natl.Acad.Sci.USA, 98, 2001
1HW1
  • Download 1hw1
  • View 1hw1
Molmil generated image of 1hw1
THE FADR-DNA COMPLEX: TRANSCRIPTIONAL CONTROL OF FATTY ACID METABOLISM IN ESCHERICHIA COLI
Descriptor:FATTY ACID METABOLISM REGULATOR PROTEIN, SULFATE ION, ZINC ION
Authors:Xu, Y., Heath, R.J., Li, Z., Rock, C.O., White, S.W.
Deposit date:2001-01-09
Release date:2001-01-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The FadR.DNA complex. Transcriptional control of fatty acid metabolism in Escherichia coli.
J.Biol.Chem., 276, 2001
1HW2
  • Download 1hw2
  • View 1hw2
Molmil generated image of 1hw2
FADR-DNA COMPLEX: TRANSCRIPTIONAL CONTROL OF FATTY ACID METABOLISM IN ECHERICHIA COLI
Descriptor:5'-D(*CP*GP*AP*TP*CP*TP*GP*GP*TP*CP*CP*GP*AP*CP*CP*AP*GP*AP*TP*GP*CP*T)-3', 5'-D(*G*CP*AP*TP*CP*TP*GP*GP*TP*CP*GP*GP*AP*CP*CP*AP*GP*AP*TP*CP*GP*A)-3', FATTY ACID METABOLISM REGULATOR PROTEIN, ...
Authors:Xu, Y., Heath, R.J., Li, Z., Rock, C.O., White, S.W.
Deposit date:2001-01-09
Release date:2001-01-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:The FadR.DNA complex. Transcriptional control of fatty acid metabolism in Escherichia coli.
J.Biol.Chem., 276, 2001
1H9D
  • Download 1h9d
  • View 1h9d
Molmil generated image of 1h9d
AML1/CBF-BETA/DNA COMPLEX
Descriptor:CORE-BINDING FACTOR ALPHA SUBUNIT1, CORE-BINDING FACTOR CBF-BETA, DNA (5'-(*GP*TP*TP*GP*CP*GP*GP*TP*TP*G)-3'), ...
Authors:Bravo, J., Warren, A.J.
Deposit date:2001-03-07
Release date:2001-03-31
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The Leukemia-Associated Aml1 (Runx1)-Cbfbeta Complex Functions as a DNA-Induced Molecular Clamp
Nat.Struct.Biol., 8, 2001
1I7V
  • Download 1i7v
  • View 1i7v
Molmil generated image of 1i7v
THE SOLUTION STRUCTURE OF A BAY REGION 1R-BENZ[A]ANTHRACENE OXIDE ADDUCT AT THE N6 POSITION OF ADENINE OF AN OLIGODEOXYNUCLEOTIDE CONTAINING THE HUMAN N-RAS CODON 61 SEQUENCE
Descriptor:5'-D(*CP*GP*GP*AP*CP*AP*(BZA)AP*GP*AP*AP*G)-3', 5'-D(*CP*TP*TP*CP*TP*TP*GP*TP*CP*CP*G)-3', 1R,2S,3R,4S-TETRAHYDRO-BENZO[A]ANTHRACENE-2,3,4-TRIOL
Authors:Li, Z., Tamura, P.J., Wilkinson, A.S., Harris, C.M., Harris, T.M., Stone, M.P.
Deposit date:2001-03-10
Release date:2001-03-28
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Intercalation of the (1R,2S,3R,4S)-N6-[1-(1,2,3,4-tetrahydro-2,3,4-trihydroxybenz[a]anthracenyl)]-2'-deoxyadenosyl adduct in the N-ras codon 61 sequence: DNA sequence effects
Biochemistry, 40, 2001
1KBL
  • Download 1kbl
  • View 1kbl
Molmil generated image of 1kbl
PYRUVATE PHOSPHATE DIKINASE
Descriptor:PYRUVATE PHOSPHATE DIKINASE, AMMONIUM ION, SULFATE ION
Authors:Herzberg, O., Chen, C.C., Liu, S.
Deposit date:2001-11-06
Release date:2002-01-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Pyruvate site of pyruvate phosphate dikinase: crystal structure of the enzyme-phosphonopyruvate complex, and mutant analysis
Biochemistry, 41, 2002
1KC7
  • Download 1kc7
  • View 1kc7
Molmil generated image of 1kc7
PYRUVATE PHOSPHATE DIKINASE WITH BOUND MG-PHOSPHONOPYRUVATE
Descriptor:pyruvate phosphate dikinase, MAGNESIUM ION, SULFATE ION, ...
Authors:Chen, C.C., Howard, A., Herzberg, O.
Deposit date:2001-11-07
Release date:2002-01-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Pyruvate site of pyruvate phosphate dikinase: crystal structure of the enzyme-phosphonopyruvate complex, and mutant analysis
Biochemistry, 41, 2002
1M62
  • Download 1m62
  • View 1m62
Molmil generated image of 1m62
SOLUTION STRUCTURE OF THE BAG DOMAIN FROM BAG4/SODD
Descriptor:BAG-family molecular chaperone regulator-4
Authors:Briknarova, K., Takayama, S., Homma, S., Baker, K., Cabezas, E., Hoyt, D.W., Li, Z., Satterthwait, A.C., Ely, K.R.
Deposit date:2002-07-11
Release date:2002-07-24
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:BAG4/SODD protein contains a short BAG domain.
J.Biol.Chem., 277, 2002
1NI7
  • Download 1ni7
  • View 1ni7
Molmil generated image of 1ni7
NORTHEAST STRUCTURAL GENOMIC CONSORTIUM TARGET ER75
Descriptor:Hypothetical protein ygdK
Authors:Liu, G., Chiang, Y., Acton, T., Montelione, G.T., Szyperski, T., Northeast Structural Genomics Consortium (NESG)
Deposit date:2002-12-21
Release date:2003-06-03
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:High-quality homology models derived from NMR and X-ray structures of E. coli proteins YgdK and Suf E suggest that all members of the YgdK/Suf E protein family are enhancers of cysteine desulfurases.
Protein Sci., 14, 2005
1NW3
  • Download 1nw3
  • View 1nw3
Molmil generated image of 1nw3
STRUCTURE OF THE CATALYTIC DOMAIN OF HUMAN DOT1L, A NON-SET DOMAIN NUCLEOSOMAL HISTONE METHYLTRANSFERASE
Descriptor:histone methyltransferase DOT1L, ACETATE ION, SULFATE ION, ...
Authors:Min, J.R., Feng, Q., Li, Z.H., Zhang, Y., Xu, R.M.
Deposit date:2003-02-05
Release date:2003-03-25
Last modified:2014-04-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of the Catalytic domain of human DOT1L, a non-SET domain nucleosomal histone methyltransferase
Cell(Cambridge,Mass.), 112, 2003
1QXF
  • Download 1qxf
  • View 1qxf
Molmil generated image of 1qxf
SOLUTION STRUCTURE OF 30S RIBOSOMAL PROTEIN S27E FROM ARCHAEOGLOBUS FULGIDUS: GR2, A NESG TARGET PROTEIN
Descriptor:30S RIBOSOMAL PROTEIN S27E
Authors:Herve Du Penhoat, C., Atreya, H.S., Shen, Y., Liu, G., Acton, T.B., Xiao, R., Montelione, G.T., Szyperski, T., Northeast Structural Genomics Consortium (NESG)
Deposit date:2003-09-05
Release date:2003-09-16
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:The NMR solution structure of the 30S ribosomal protein S27e encoded in gene RS27_ARCFU of Archaeoglobus fulgidis reveals a novel protein fold
Protein Sci., 13, 2004
1ULW
  • Download 1ulw
  • View 1ulw
Molmil generated image of 1ulw
CRYSTAL STRUCTURE OF P450NOR SER73GLY/SER75GLY MUTANT
Descriptor:Cytochrome P450 55A1, PROTOPORPHYRIN IX CONTAINING FE
Authors:Oshima, R., Fushinobu, S., Su, F., Li, Z., Takaya, N., Shoun, H.
Deposit date:2003-09-16
Release date:2004-10-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural evidence for direct hydride transfer from NADH to cytochrome P450nor
J.Mol.Biol., 342, 2004