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2JES
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BU of 2jes by Molmil
Portal protein (gp6) from bacteriophage SPP1
Descriptor: CALCIUM ION, MERCURY (II) ION, PORTAL PROTEIN, ...
Authors:Lebedev, A.A, Krause, M.H, Isidro, A.L, Vagin, A.A, Orlova, E.V, Turner, J, Dodson, E.J, Tavares, P, Antson, A.A.
Deposit date:2007-01-21
Release date:2007-03-27
Last modified:2017-03-29
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structural Framework for DNA Translocation Via the Viral Portal Protein
Embo J., 26, 2007
2C20
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BU of 2c20 by Molmil
CRYSTAL STRUCTURE OF UDP-GLUCOSE 4-EPIMERASE
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, UDP-GLUCOSE 4-EPIMERASE, ZINC ION
Authors:Lebedev, A.A, Moroz, O.V, Blagova, E.V, Levdikov, V.M, Fogg, M.J, Brannigan, J.A, Wilkinson, A.J, Wilson, K.S.
Deposit date:2005-09-22
Release date:2007-02-20
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal Structure of Udp-Glucose 4-Epimerase from Bacillus Anthracis at 2.7A Resolution
To be Published
4BQ0
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BU of 4bq0 by Molmil
Pseudomonas aeruginosa beta-alanine:pyruvate aminotransferase holoenzyme without divalent cations on dimer-dimer interface
Descriptor: BETA-ALANINE--PYRUVATE TRANSAMINASE, CHLORIDE ION, PYRIDOXAL-5'-PHOSPHATE
Authors:Isupov, M.N, Lebedev, A.A, Westlake, A, Sayer, C, Littlechild, J.A.
Deposit date:2013-05-29
Release date:2013-06-05
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Space-Group and Origin Ambiguity in Macromolecular Structures with Pseudo-Symmetry and its Treatment with the Program Zanuda.
Acta Crystallogr.,Sect.D, 70, 2014
1AX4
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BU of 1ax4 by Molmil
TRYPTOPHANASE FROM PROTEUS VULGARIS
Descriptor: POTASSIUM ION, TRYPTOPHANASE
Authors:Isupov, M.N, Antson, A.A, Dodson, E.J, Dodson, G.G, Dementieva, I.S, Zakomirdina, L.N, Wilson, K.S, Dauter, Z, Lebedev, A.A, Harutyunyan, E.H.
Deposit date:1997-10-28
Release date:1998-01-28
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of tryptophanase.
J.Mol.Biol., 276, 1998
5NPT
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BU of 5npt by Molmil
Structure of the N-terminal domain of the yeast telomerase reverse transcriptase
Descriptor: Telomerase reverse transcriptase
Authors:Rodina, E.V, Lebedev, A.A, Hakanpaa, J, Hackenberg, C, Petrova, O.A, Zvereva, M.I, Dontsova, O.A, Lamzin, V.S.
Deposit date:2017-04-18
Release date:2017-12-20
Last modified:2018-02-28
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure and function of the N-terminal domain of the yeast telomerase reverse transcriptase.
Nucleic Acids Res., 46, 2018
7NIT
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BU of 7nit by Molmil
X-ray structure of a multidomain BbgIII from Bifidobacterium bifidum
Descriptor: Beta-galactosidase, CALCIUM ION, GLYCEROL, ...
Authors:Moroz, O.V, Blagova, E, Lebedev, A.A, Sanchez Rodriguez, F, Rigden, D.J, Tams, J.W, Wilting, R, Vester, J.K, Longhin, E, Krogh, K.B.R, Pache, R.A, Davies, G.J, Wilson, K.S.
Deposit date:2021-02-14
Release date:2021-12-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Multitasking in the gut: the X-ray structure of the multidomain BbgIII from Bifidobacterium bifidum offers possible explanations for its alternative functions.
Acta Crystallogr D Struct Biol, 77, 2021
1GOV
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BU of 1gov by Molmil
RIBONUCLEASE BI(G SPECIFIC ENDONUCLEASE) COMPLEXED WITH SULFATE IONS
Descriptor: RIBONUCLEASE, SULFATE ION
Authors:Polyakov, K.M, Lebedev, A.A, Pavlovsky, A.G, Sanishvili, R.G, Dodson, G.G.
Deposit date:2001-10-26
Release date:2001-11-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Structure of Substrate-Free Microbial Ribonuclease Binase and of its Complexes with 3'Gmp and Sulfate Ions
Acta Crystallogr.,Sect.D, 58, 2002
3SS9
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BU of 3ss9 by Molmil
Crystal structure of holo D-serine dehydratase from Escherichia coli at 1.97 A resolution
Descriptor: D-serine dehydratase, POTASSIUM ION, PYRIDOXAL-5'-PHOSPHATE
Authors:Urusova, D.V, Isupov, M.N, Antonyuk, S.V, Kachalova, G.S, Vagin, A.A, Lebedev, A.A, Bourenkov, G.P, Dauter, Z, Bartunik, H.D, Melik-Adamyan, W.R, Mueller, T.D, Schnackerz, K.D.
Deposit date:2011-07-08
Release date:2012-01-18
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Crystal structure of D-serine dehydratase from Escherichia coli.
Biochim.Biophys.Acta, 1824, 2011
3SS7
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BU of 3ss7 by Molmil
Crystal structure of holo D-serine dehydratase from Escherichia coli at 1.55 A resolution
Descriptor: D-serine dehydratase, GLYCEROL, POTASSIUM ION, ...
Authors:Urusova, D.V, Isupov, M.N, Antonyuk, S.V, Kachalova, G.S, Vagin, A.A, Lebedev, A.A, Bourenkov, G.P, Dauter, Z, Bartunik, H.D, Melik-Adamyan, W.R, Mueller, T.D, Schnackerz, K.D.
Deposit date:2011-07-07
Release date:2012-01-18
Last modified:2012-02-08
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structure of D-serine dehydratase from Escherichia coli.
Biochim.Biophys.Acta, 1824, 2011
1QMV
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BU of 1qmv by Molmil
thioredoxin peroxidase B from red blood cells
Descriptor: PEROXIREDOXIN-2
Authors:Isupov, M.N, Littlechild, J.A, Lebedev, A.A, Errington, N, Vagin, A.A, Schroder, E.
Deposit date:1999-10-07
Release date:2000-07-28
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of Decameric 2-Cys Peroxiredoxin from Human Erythrocytes at 1.7 A Resolution.
Structure, 8, 2000
6I7S
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BU of 6i7s by Molmil
Microsomal triglyceride transfer protein
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, ...
Authors:Biterova, E, Isupov, M.N, Keegan, R.M, Lebedev, A.A, Ruddock, L.W.
Deposit date:2018-11-17
Release date:2019-08-21
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The crystal structure of human microsomal triglyceride transfer protein.
Proc.Natl.Acad.Sci.USA, 116, 2019
1GOU
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BU of 1gou by Molmil
Ribonuclease Binase (G Specific Endonuclease) Unliganded Form
Descriptor: RIBONUCLEASE
Authors:Polyakov, K.M, Lebedev, A.A, Dodson, G.G.
Deposit date:2001-10-26
Release date:2001-11-29
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:The Structure of Substrate-Free Microbial Ribonuclease Binase and of its Complexes with 3'Gmp and Sulfate Ions
Acta Crystallogr.,Sect.D, 58, 2002
2YHF
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BU of 2yhf by Molmil
1.9 Angstrom Crystal Structure of CLEC5A
Descriptor: C-TYPE LECTIN DOMAIN FAMILY 5 MEMBER A
Authors:Watson, A.A, Lebedev, A.A, Murshudov, G.M, Vagin, A.A, Hall, B.A, O'Callaghan, C.A.
Deposit date:2011-04-30
Release date:2011-05-11
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Flexibility of the Macrophage Dengue Virus Receptor Clec5A: Implications for Ligand Binding and Signaling.
J.Biol.Chem., 286, 2011
2FX0
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BU of 2fx0 by Molmil
Crystal Structure of HlyIIR, a Hemolysin II transcriptional Regulator
Descriptor: hemolysin II regulatory protein
Authors:Kovalevskiy, O.V, Lebedev, A.A, Solonin, A.S, Antson, A.A.
Deposit date:2006-02-03
Release date:2006-02-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of Bacillus cereus HlyIIR, a Transcriptional Regulator of the Gene for Pore-forming Toxin Hemolysin II.
J.Mol.Biol., 365, 2007
2V9P
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BU of 2v9p by Molmil
Crystal structure of papillomavirus E1 hexameric helicase DNA-free form
Descriptor: MAGNESIUM ION, PHOSPHATE ION, REPLICATION PROTEIN E1
Authors:Sanders, C.M, Kovalevskiy, O.V, Sizov, D, Lebedev, A.A, Isupov, M.N, Antson, A.A.
Deposit date:2007-08-24
Release date:2007-10-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Papillomavirus E1 Helicase Assembly Maintains an Asymmetric State in the Absence of DNA and Nucleotide Cofactors.
Nucleic Acids Res., 35, 2007
2WBM
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BU of 2wbm by Molmil
Crystal structure of mthSBDS, the homologue of the Shwachman-Bodian- Diamond syndrome protein in the euriarchaeon Methanothermobacter thermautotrophicus
Descriptor: CHLORIDE ION, GLYCEROL, RIBOSOME MATURATION PROTEIN SDO1 HOMOLOG, ...
Authors:Ng, C.L, Isupov, M.N, Lebedev, A.A, Ortiz-Lombardia, M, Antson, A.A.
Deposit date:2009-03-02
Release date:2009-06-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Conformational Flexibility and Molecular Interactions of an Archaeal Homologue of the Shwachman-Bodian-Diamond Syndrome Protein.
Bmc Struct.Biol., 9, 2009
2WNY
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BU of 2wny by Molmil
Structure of Mth689, a DUF54 protein from Methanothermobacter thermautotrophicus
Descriptor: CHLORIDE ION, CONSERVED PROTEIN MTH689, NICKEL (II) ION
Authors:Ng, C.L, Waterman, D.G, Lebedev, A.A, Smits, C, Ortiz-Lombardia, M, Antson, A.A.
Deposit date:2009-07-21
Release date:2010-09-01
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure of Mth689, a Duf54 Protein from Methanothermobacter Thermautotrophicus
To be Published
2W11
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BU of 2w11 by Molmil
Structure of the L-2-haloacid dehalogenase from Sulfolobus tokodaii
Descriptor: (2S)-2-HYDROXYPROPANOIC ACID, 2-HALOALKANOIC ACID DEHALOGENASE
Authors:Rye, C.A, Isupov, M.N, Lebedev, A.A, Littlechild, J.A.
Deposit date:2008-10-13
Release date:2008-12-09
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Biochemical and Structural Studies of a L-Haloacid Dehalogenase from the Thermophilic Archaeon Sulfolobus Tokodaii.
Extremophiles, 13, 2009
1GOY
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BU of 1goy by Molmil
HYDROLASE(ENDORIBONUCLEASE)RIBONUCLEASE BI(G SPECIFIC ENDONUCLEASE) (E.C.3.1.27.-) COMPLEXED WITH GUANOSINE-3'-PHOSPHATE (3'-GMP)
Descriptor: GUANOSINE-3'-MONOPHOSPHATE, RIBONUCLEASE, SULFATE ION
Authors:Polyakov, K.M, Lebedev, A.A, Pavlovsky, A.G, Sanishvili, R.G, Dodson, G.G.
Deposit date:2001-10-26
Release date:2001-11-29
Last modified:2017-07-12
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Structure of Substrate-Free Microbial Ribonuclease Binase and of its Complexes with 3'Gmp and Sulfate Ions
Acta Crystallogr.,Sect.D, 58, 2002
6H77
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BU of 6h77 by Molmil
E1 enzyme for ubiquitin like protein activation in complex with UBL
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, DI(HYDROXYETHYL)ETHER, ...
Authors:Soudah, N, Padala, P, Hassouna, F, Mashahreh, B, Lebedev, A.A, Isupov, M.N, Cohen-Kfir, E, Wiener, R.
Deposit date:2018-07-30
Release date:2018-10-31
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:An N-Terminal Extension to UBA5 Adenylation Domain Boosts UFM1 Activation: Isoform-Specific Differences in Ubiquitin-like Protein Activation.
J.Mol.Biol., 431, 2019
6H78
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BU of 6h78 by Molmil
E1 enzyme for ubiquitin like protein activation.
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, ...
Authors:Soudah, N, Padala, P, Hassouna, F, Mashahreh, B, Lebedev, A.A, Isupov, M.N, Cohen-Kfir, E, Wiener, R.
Deposit date:2018-07-30
Release date:2018-10-31
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:An N-Terminal Extension to UBA5 Adenylation Domain Boosts UFM1 Activation: Isoform-Specific Differences in Ubiquitin-like Protein Activation.
J.Mol.Biol., 431, 2019
3O6Q
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BU of 3o6q by Molmil
The Structure of SpoIISA and SpoIISB, a Toxin - Antitoxin System
Descriptor: Stage II sporulation protein SA, Stage II sporulation protein SB
Authors:Levdikov, V.M, Blagova, E.V, Lebedev, A.A, Wilkinson, A.J, Florek, P, Barak, I.
Deposit date:2010-07-29
Release date:2010-12-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The structure and interactions of SpoIISA and SpoIISB, a toxin-antitoxin system in Bacillus subtilis.
J.Biol.Chem., 161, 2010
2W43
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BU of 2w43 by Molmil
Structure of L-haloacid dehalogenase from S. tokodaii
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, HYPOTHETICAL 2-HALOALKANOIC ACID DEHALOGENASE, PHOSPHATE ION
Authors:Rye, C.A, Isupov, M.N, Lebedev, A.A, Littlechild, J.A.
Deposit date:2008-11-21
Release date:2008-12-09
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Biochemical and Structural Studies of a L-Haloacid Dehalogenase from the Thermophilic Archaeon Sulfolobus Tokodaii.
Extremophiles, 13, 2009
8B2H
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BU of 8b2h by Molmil
Muramidase from Thermothielavioides terrestris, catalytic domain
Descriptor: 1,2-ETHANEDIOL, SH3b domain-containing protein, ZINC ION
Authors:Moroz, O.V, Blagova, E, Lebedev, A.A, Skov, L.K, Pache, R.A, Schnorr, K.M, Kiemer, L, Nymand-Grarup, S, Ming, L, Ye, L, Klausen, M, Cohn, M.T, Schmidt, E.G.W, Davies, G.J, Wilson, K.S.
Deposit date:2022-09-13
Release date:2023-07-19
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Module walking using an SH3-like cell-wall-binding domain leads to a new GH184 family of muramidases.
Acta Crystallogr D Struct Biol, 79, 2023
8B2F
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BU of 8b2f by Molmil
SH3-like cell wall binding domain of the GH24 family muramidase from Trichophaea saccata in complex with triglycine
Descriptor: 1,2-ETHANEDIOL, GLY-GLY-GLY, SH3-like cell wall binding domain-containing protein, ...
Authors:Moroz, O.V, Blagova, E, Lebedev, A.A, Skov, L.K, Pache, R.A, Schnorr, K.M, Kiemer, L, Nymand-Grarup, S, Ming, L, Ye, L, Klausen, M, Cohn, M.T, Schmidt, E.G.W, Davies, G.J, Wilson, K.S.
Deposit date:2022-09-13
Release date:2023-07-19
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.183 Å)
Cite:Module walking using an SH3-like cell-wall-binding domain leads to a new GH184 family of muramidases.
Acta Crystallogr D Struct Biol, 79, 2023

 

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