Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2P52
DownloadVisualize
BU of 2p52 by Molmil
mouse p53 DNA-binding domain in zinc-free oxidized state
Descriptor: Cellular tumor antigen p53
Authors:Kwon, E, Kim, D.Y, Suh, S.W, Kim, K.K.
Deposit date:2007-03-14
Release date:2008-01-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of the mouse p53 core domain in zinc-free state.
Proteins, 70, 2008
3OEO
DownloadVisualize
BU of 3oeo by Molmil
The crystal structure E. coli Spy
Descriptor: CADMIUM ION, Spheroplast protein Y
Authors:Kwon, E, Kim, D.Y, Gross, C.A, Gross, J.D, Kim, K.K.
Deposit date:2010-08-13
Release date:2010-09-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The crystal structure Escherichia coli Spy.
Protein Sci., 19, 2010
6JHE
DownloadVisualize
BU of 6jhe by Molmil
Crystal Structure of Bacillus subtilis SigW domain 4 in complexed with -35 element DNA
Descriptor: DNA (5'-D(*AP*AP*AP*GP*GP*TP*TP*TP*CP*AP*A)-3'), DNA (5'-D(P*TP*TP*GP*AP*AP*AP*CP*CP*TP*TP*T)-3'), ECF RNA polymerase sigma factor SigW
Authors:Kwon, E, Devkota, S.R, Pathak, D, Dahal, P, Kim, D.Y.
Deposit date:2019-02-18
Release date:2020-01-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.101 Å)
Cite:Structural analysis of the recognition of the -35 promoter element by SigW from Bacillus subtilis.
Plos One, 14, 2019
6JHK
DownloadVisualize
BU of 6jhk by Molmil
Crystal Structure of Bacillus subtilis RsbS
Descriptor: RsbS negative regulator of sigma-B
Authors:Kwon, E, Pathak, D, Dahal, P, Kim, D.Y.
Deposit date:2019-02-18
Release date:2019-09-11
Last modified:2019-11-20
Method:X-RAY DIFFRACTION (3.101 Å)
Cite:Structural insights into stressosome assembly.
Iucrj, 6, 2019
3V67
DownloadVisualize
BU of 3v67 by Molmil
Periplasmic domain of Vibrio parahaemolyticus CpxA
Descriptor: Sensor protein CpxA
Authors:Kwon, E, Kim, D.Y, Ngo, T.D, Gross, J.D, Kim, K.K.
Deposit date:2011-12-19
Release date:2012-09-26
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The crystal structure of the periplasmic domain of Vibrio parahaemolyticus CpxA
Protein Sci., 21, 2012
5X55
DownloadVisualize
BU of 5x55 by Molmil
Crystal structure of mimivirus uracil-DNA glycosylase
Descriptor: Probable uracil-DNA glycosylase
Authors:Kwon, E, Pathak, D, Kim, D.Y.
Deposit date:2017-02-14
Release date:2017-08-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.302 Å)
Cite:Crystal structure of mimivirus uracil-DNA glycosylase
PLoS ONE, 12, 2017
7W46
DownloadVisualize
BU of 7w46 by Molmil
Crystal structure of Bacillus subtilis YjoB with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Uncharacterized ATPase YjoB
Authors:Dahal, P, Kwon, E, Kim, D.Y.
Deposit date:2021-11-26
Release date:2022-10-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure and biochemical analysis suggest that YjoB ATPase is a putative substrate-specific molecular chaperone.
Proc.Natl.Acad.Sci.USA, 119, 2022
7W42
DownloadVisualize
BU of 7w42 by Molmil
Crystal structure of Bacillus subtilis YjoB
Descriptor: Uncharacterized ATPase YjoB
Authors:Dahal, P, Kwon, E, Kim, D.Y.
Deposit date:2021-11-26
Release date:2022-10-19
Method:X-RAY DIFFRACTION (2.619 Å)
Cite:Crystal structure and biochemical analysis suggest that YjoB ATPase is a putative substrate-specific molecular chaperone.
Proc.Natl.Acad.Sci.USA, 119, 2022
7W43
DownloadVisualize
BU of 7w43 by Molmil
Crystal structure of Bacillus subtilis YjoB N-terminal domain
Descriptor: Uncharacterized ATPase YjoB
Authors:Dahal, P, Kwon, E, Kim, D.Y.
Deposit date:2021-11-26
Release date:2022-10-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure and biochemical analysis suggest that YjoB ATPase is a putative substrate-specific molecular chaperone.
Proc.Natl.Acad.Sci.USA, 119, 2022
7WA4
DownloadVisualize
BU of 7wa4 by Molmil
Crystal structure of GIGANTEA in complex with LKP2
Descriptor: Adagio protein 2, FLAVIN MONONUCLEOTIDE, Protein GIGANTEA
Authors:Pathak, D, Dahal, P, Kwon, E, Kim, D.Y.
Deposit date:2021-12-12
Release date:2022-04-27
Last modified:2022-05-04
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structural analysis of the regulation of blue-light receptors by GIGANTEA.
Cell Rep, 39, 2022
8I2D
DownloadVisualize
BU of 8i2d by Molmil
Crystal structure of Bacillus subtilis LytE
Descriptor: Probable peptidoglycan endopeptidase LytE
Authors:Tandukar, S, Kwon, E, Kim, D.Y.
Deposit date:2023-01-14
Release date:2023-04-19
Last modified:2023-05-17
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Structural insights into the regulation of peptidoglycan DL-endopeptidases by inhibitory protein IseA.
Structure, 31, 2023
8I2E
DownloadVisualize
BU of 8i2e by Molmil
Crystal structure of Bacillus subtilis LytE in complex with IseA
Descriptor: Probable peptidoglycan endopeptidase LytE, Uncharacterized protein YoeB
Authors:Tandukar, S, Kwon, E, Kim, D.Y.
Deposit date:2023-01-14
Release date:2023-04-05
Last modified:2023-05-17
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural insights into the regulation of peptidoglycan DL-endopeptidases by inhibitory protein IseA.
Structure, 31, 2023
8I2F
DownloadVisualize
BU of 8i2f by Molmil
Crystal structure of Bacillus subtilis LytE catalytic domain in complex with IseA
Descriptor: Probable peptidoglycan endopeptidase LytE, Uncharacterized protein YoeB
Authors:Tandukar, S, Kwon, E, Kim, D.Y.
Deposit date:2023-01-14
Release date:2023-04-05
Last modified:2023-05-17
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Structural insights into the regulation of peptidoglycan DL-endopeptidases by inhibitory protein IseA.
Structure, 31, 2023
7CX5
DownloadVisualize
BU of 7cx5 by Molmil
Crystal structure of the DNA-binding domain of Bacillus subtilis CssR
Descriptor: Transcriptional regulatory protein CssR
Authors:Dahal, P, Kim, D.Y, Kwon, E.
Deposit date:2020-09-01
Release date:2021-04-21
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.07 Å)
Cite:Crystal structure of the DNA-binding domain of Bacillus subtilis CssR.
Biochem.Biophys.Res.Commun., 555, 2021
7WSJ
DownloadVisualize
BU of 7wsj by Molmil
Crystal structure of the tandem B-box domain of Arabidopsis thaliana CONSTANS
Descriptor: ZINC ION, Zinc finger protein CONSTANS
Authors:Dahal, P, Pathak, D, Kwon, E, Kim, D.Y.
Deposit date:2022-01-29
Release date:2022-03-02
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of a tandem B-box domain from Arabidopsis CONSTANS.
Biochem.Biophys.Res.Commun., 599, 2022
2O7A
DownloadVisualize
BU of 2o7a by Molmil
T4 lysozyme C-terminal fragment
Descriptor: ACETATE ION, CHLORIDE ION, Lysozyme
Authors:Echols, N, Kwon, E, Marqusee, S.M, Alber, T.
Deposit date:2006-12-10
Release date:2007-04-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (0.84 Å)
Cite:Exploring subdomain cooperativity in T4 lysozyme I: Structural and energetic studies of a circular permutant and protein fragment.
Protein Sci., 16, 2007
6LYD
DownloadVisualize
BU of 6lyd by Molmil
Crystal Structure of mimivirus UNG Y322L in complex with UGI
Descriptor: Probable uracil-DNA glycosylase, Uracil-DNA glycosylase inhibitor
Authors:Pathak, D, Kwon, E, Kim, D.Y.
Deposit date:2020-02-14
Release date:2020-07-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.598 Å)
Cite:Selective interactions between mimivirus uracil-DNA glycosylase and inhibitory proteins determined by a single amino acid.
J.Struct.Biol., 211, 2020
6M37
DownloadVisualize
BU of 6m37 by Molmil
The crystal structure of B. subtilis RsbV/RsbW complex in the hexagonal crystal form
Descriptor: Anti-sigma-B factor antagonist, Serine-protein kinase RsbW
Authors:Pathak, D, Kwon, E, Kim, D.Y.
Deposit date:2020-03-02
Release date:2020-07-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural insights into the regulation of SigB activity by RsbV and RsbW.
Iucrj, 7, 2020
6M36
DownloadVisualize
BU of 6m36 by Molmil
The crystal structure of B. subtilis RsbV/RsbW complex in the monoclinic crystal form
Descriptor: Anti-sigma-B factor antagonist, Serine-protein kinase RsbW
Authors:Pathak, D, Kwon, E, Kim, D.Y.
Deposit date:2020-03-02
Release date:2020-07-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structural insights into the regulation of SigB activity by RsbV and RsbW.
Iucrj, 7, 2020
6LYE
DownloadVisualize
BU of 6lye by Molmil
Crystal Structure of mimivirus UNG Y322F in complex with UGI
Descriptor: Probable uracil-DNA glycosylase, Uracil-DNA glycosylase inhibitor
Authors:Pathak, D, Kwon, E, Kim, D.Y.
Deposit date:2020-02-14
Release date:2020-07-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Selective interactions between mimivirus uracil-DNA glycosylase and inhibitory proteins determined by a single amino acid.
J.Struct.Biol., 211, 2020
3M4W
DownloadVisualize
BU of 3m4w by Molmil
Structural basis for the negative regulation of bacterial stress response by RseB
Descriptor: Sigma-E factor negative regulatory protein, Sigma-E factor regulatory protein rseB, ZINC ION
Authors:Kim, D.Y, Kwon, E, Choi, J.K, Hwang, H.-Y, Kim, K.K.
Deposit date:2010-03-12
Release date:2010-05-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for the negative regulation of bacterial stress response by RseB
Protein Sci., 19, 2010
5WUQ
DownloadVisualize
BU of 5wuq by Molmil
Crystal structure of SigW in complex with its anti-sigma RsiW, a zinc binding form
Descriptor: Anti-sigma-W factor RsiW, ECF RNA polymerase sigma factor SigW, ZINC ION
Authors:Devkota, S.R, Kwon, E, Ha, S.C, Kim, D.Y.
Deposit date:2016-12-20
Release date:2017-03-29
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural insights into the regulation of Bacillus subtilis SigW activity by anti-sigma RsiW
PLoS ONE, 12, 2017
5WUR
DownloadVisualize
BU of 5wur by Molmil
Crystal structure of SigW in complex with its anti-sigma RsiW, an oxdized form
Descriptor: Anti-sigma-W factor RsiW, ECF RNA polymerase sigma factor SigW
Authors:Devkota, S.R, Kwon, E, Ha, S.C, Kim, D.Y.
Deposit date:2016-12-20
Release date:2017-03-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural insights into the regulation of Bacillus subtilis SigW activity by anti-sigma RsiW
PLoS ONE, 12, 2017
2O79
DownloadVisualize
BU of 2o79 by Molmil
T4 lysozyme with C-terminal extension
Descriptor: CHLORIDE ION, GLYCEROL, Lysozyme, ...
Authors:Llinas, M, Crowder, S.M, Echols, N, Alber, T, Marqusee, S.
Deposit date:2006-12-10
Release date:2007-04-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Exploring subdomain cooperativity in T4 lysozyme I: Structural and energetic studies of a circular permutant and protein fragment.
Protein Sci., 16, 2007
2O4W
DownloadVisualize
BU of 2o4w by Molmil
T4 lysozyme circular permutant
Descriptor: CHLORIDE ION, Lysozyme
Authors:Llinas, M, Crowder, S.M, Echols, N, Alber, T, Marqusee, S.
Deposit date:2006-12-05
Release date:2007-04-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Exploring subdomain cooperativity in T4 lysozyme I: Structural and energetic studies of a circular permutant and protein fragment.
Protein Sci., 16, 2007

 

12>

218500

PDB entries from 2024-04-17

PDB statisticsPDBj update infoContact PDBjnumon