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1VCX
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NEUTRON CRYSTAL STRUCTURE OF THE WILD TYPE RUBREDOXIN FROM PYROCOCCUS FURIOSUS AT 1.5A RESOLUTION
Descriptor:Rubredoxin, FE (III) ION
Authors:Kurihara, K., Tanaka, I., Chatake, T., Adams, M.W.W., Jenney Jr., F.E., Moiseeva, N., Bau, R., Niimura, N.
Deposit date:2004-03-17
Release date:2004-08-10
Last modified:2018-07-18
Method:NEUTRON DIFFRACTION (1.5 Å)
Cite:Neutron crystallographic study on rubredoxin from Pyrococcus furiosus by BIX-3, a single-crystal diffractometer for biomacromolecules
Proc.Natl.Acad.Sci.USA, 101, 2004
3U2I
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X-RAY CRYSTAL STRUCTURE OF HUMAN TRANSTHYRETIN AT ROOM TEMPERATURE
Descriptor:Transthyretin
Authors:Yokoyama, T., Mizuguchi, M., Nabeshima, Y., Kusaka, K., Yamada, T., Hosoya, T., Ohhara, T., Kurihara, K., Tomoyori, K., Tanaka, I., Niimura, N.
Deposit date:2011-10-03
Release date:2012-02-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Hydrogen-bond network and pH sensitivity in transthyretin: Neutron crystal structure of human transthyretin
J.Struct.Biol., 177, 2012
3U2J
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NEUTRON CRYSTAL STRUCTURE OF HUMAN TRANSTHYRETIN
Descriptor:Transthyretin
Authors:Yokoyama, T., Mizuguchi, M., Nabeshima, Y., Kusaka, K., Yamada, T., Hosoya, T., Ohhara, T., Kurihara, K., Tomoyori, K., Tanaka, I., Niimura, N.
Deposit date:2011-10-03
Release date:2012-02-22
Last modified:2018-03-07
Method:NEUTRON DIFFRACTION (2 Å)
Cite:Hydrogen-bond network and pH sensitivity in transthyretin: Neutron crystal structure of human transthyretin
J.Struct.Biol., 177, 2012
3VXE
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HUMAN ALPHA-THROMBIN-BIVALIRUDIN COMPLEX AT PD5.0
Descriptor:Thrombin light chain, Thrombin heavy chain, BIVALIRUDIN, ...
Authors:Yamada, T., Kurihara, K., Masumi, K., Tamada, T., Tomoyori, K., Ohnishi, Y., Tanaka, I., Kuroki, R., Niimura, N.
Deposit date:2012-09-12
Release date:2013-09-04
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Neutron and X-ray crystallographic analysis of the human alpha-thrombin-bivalirudin complex at pD 5.0: protonation states and hydration structure of the enzyme-product complex
Biochim.Biophys.Acta, 1834, 2013
3VXF
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X/N JOINT REFINEMENT OF HUMAN ALPHA-THROMBIN-BIVALIRUDIN COMPLEX PD5
Descriptor:Thrombin light chain, Thrombin heavy chain, BIVALIRUDIN, ...
Authors:Yamada, T., Kurihara, K., Masumi, K., Tamada, T., Tomoyori, K., Ohnishi, Y., Tanaka, I., Kuroki, R., Niimura, N.
Deposit date:2012-09-12
Release date:2013-09-04
Last modified:2018-11-28
Method:X-RAY DIFFRACTION (1.602 Å), NEUTRON DIFFRACTION
Cite:Neutron and X-ray crystallographic analysis of the human alpha-thrombin-bivalirudin complex at pD 5.0: protonation states and hydration structure of the enzyme-product complex
Biochim.Biophys.Acta, 1834, 2013
3OTJ
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A CRYSTAL STRUCTURE OF TRYPSIN COMPLEXED WITH BPTI (BOVINE PANCREATIC TRYPSIN INHIBITOR) BY X-RAY/NEUTRON JOINT REFINEMENT
Descriptor:Cationic trypsin, Pancreatic trypsin inhibitor, CALCIUM ION, ...
Authors:Kawamura, K., Yamada, T., Kurihara, K., Tamada, T., Kuroki, R., Tanaka, I., Takahashi, H., Niimura, N.
Deposit date:2010-09-12
Release date:2011-01-26
Last modified:2017-11-08
Method:NEUTRON DIFFRACTION (2.15 Å), X-RAY DIFFRACTION
Cite:X-ray and neutron protein crystallographic analysis of the trypsin-BPTI complex.
Acta Crystallogr.,Sect.D, 67, 2011
3WA2
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HIGH RESOLUTION CRYSTAL STRUCTURE OF COPPER AMINE OXIDASE FROM ARTHROBACTER GLOBIFORMIS
Descriptor:Phenylethylamine oxidase, COPPER (II) ION, SODIUM ION, ...
Authors:Murakawa, T., Hayashi, H., Sunami, T., Kurihara, K., Tamada, T., Kuroki, R., Suzuki, M., Tanizawa, K., Okajima, T.
Deposit date:2013-04-22
Release date:2013-09-11
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.08 Å)
Cite:High-resolution crystal structure of copper amine oxidase from Arthrobacter globiformis: assignment of bound diatomic molecules as O2
Acta Crystallogr.,Sect.D, 69, 2013
3WA3
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CRYSTAL STRUCTURE OF COPPER AMINE OXIDASE FROM ARTHROBACTER GLOBIFORMIS IN N2 CONDITION
Descriptor:Phenylethylamine oxidase, COPPER (II) ION, SODIUM ION, ...
Authors:Murakawa, T., Hayashi, H., Sunami, T., Kurihara, K., Tamada, T., Kuroki, R., Suzuki, M., Tanizawa, K., Okajima, T.
Deposit date:2013-04-22
Release date:2013-09-11
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:High-resolution crystal structure of copper amine oxidase from Arthrobacter globiformis: assignment of bound diatomic molecules as O2
Acta Crystallogr.,Sect.D, 69, 2013
1IU5
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X-RAY CRYSTAL STRUCTURE OF THE RUBREDOXIN MUTANT FROM PYROCOCCUS FURIOSUS
Descriptor:rubredoxin, FE (III) ION
Authors:Chatake, T., Kurihara, K., Tanaka, I., Tsyba, I., Bau, R., Jenney, F.E., Adams, M.W.W., Niimura, N.
Deposit date:2002-02-27
Release date:2002-08-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:A neutron crystallographic analysis of a rubredoxin mutant at 1.6 A resolution.
Acta Crystallogr.,Sect.D, 60, 2004
1IU6
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NEUTRON CRYSTAL STRUCTURE OF THE RUBREDOXIN MUTANT FROM PYROCOCCUS FURIOSUS
Descriptor:rubredoxin, FE (III) ION
Authors:Chatake, T., Kurihara, K., Tanaka, I., Tsyba, I., Bau, R., Jenney, F.E., Adams, M.W.W., Niimura, N.
Deposit date:2002-02-27
Release date:2002-08-27
Last modified:2018-12-05
Method:NEUTRON DIFFRACTION (1.6 Å)
Cite:A neutron crystallographic analysis of a rubredoxin mutant at 1.6 A resolution.
Acta Crystallogr.,Sect.D, 60, 2004
1WQY
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X-RAY STRUCTURAL ANALYSIS OF B-DNA DECAMER D(CCATTAATGG)2 CRYSTAL GROWN IN D2O SOLUTION
Descriptor:5'-D(*CP*CP*AP*TP*TP*AP*AP*TP*GP*G)-3'
Authors:Arai, S., Chatake, T., Ohhara, T., Kurihara, K., Tanaka, I., Suzuki, N., Fujimoto, Z., Mizuno, H., Niimura, N.
Deposit date:2004-10-07
Release date:2005-06-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Complicated water orientations in the minor groove of the B-DNA decamer d(CCATTAATGG)2 observed by neutron diffraction measurements
Nucleic Acids Res., 33, 2005
1WQZ
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COMPLICATED WATER ORIENTATIONS IN THE MINOR GROOVE OF B-DNA DECAMER D(CCATTAATGG)2 OBSERVED BY NEUTRON DIFFRACTION MEASUREMENTS
Descriptor:5'-D(*CP*CP*AP*TP*TP*AP*AP*TP*GP*G)-3'
Authors:Arai, S., Chatake, T., Ohhara, T., Kurihara, K., Tanaka, I., Suzuki, N., Fujimoto, Z., Mizuno, H., Niimura, N.
Deposit date:2004-10-07
Release date:2005-06-21
Last modified:2018-07-04
Method:NEUTRON DIFFRACTION (3 Å)
Cite:Complicated water orientations in the minor groove of the B-DNA decamer d(CCATTAATGG)2 observed by neutron diffraction measurements
Nucleic Acids Res., 33, 2005
3FHP
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A NEUTRON CRYSTALLOGRAPHIC ANALYSIS OF A PORCINE 2ZN INSULIN AT 2.0 A RESOLUTION
Descriptor:Insulin, ZINC ION
Authors:Iwai, W., Kurihara, K., Yamada, T., Kobayashi, Y., Ohnishi, Y., Tanaka, I., Takahashi, H., Niimura, N.
Deposit date:2008-12-09
Release date:2009-10-20
Last modified:2018-07-18
Method:NEUTRON DIFFRACTION (2 Å)
Cite:A neutron crystallographic analysis of T6 porcine insulin at 2.1 A resolution
Acta Crystallogr.,Sect.D, 65, 2009
3VTE
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CRYSTAL STRUCTURE OF TETRAHYDROCANNABINOLIC ACID SYNTHASE FROM CANNABIS SATIVA
Descriptor:Tetrahydrocannabinolic acid synthase, N-ACETYL-D-GLUCOSAMINE, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Shoyama, Y., Tamada, T., Kurihara, K., Takeuchi, A., Taura, F., Arai, S., Blaber, M., Shoyama, Y., Morimoto, S., Kuroki, R.
Deposit date:2012-05-28
Release date:2012-07-25
Last modified:2014-04-30
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structure and function of 1-tetrahydrocannabinolic acid (THCA) synthase, the enzyme controlling the psychoactivity of Cannabis sativa
J.Mol.Biol., 423, 2012
4GPG
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X/N JOINT REFINEMENT OF ACHROMOBACTER LYTICUS PROTEASE I FREE FORM AT PD8.0
Descriptor:Protease 1
Authors:Ohnishi, Y., Yamada, T., Kurihara, K., Tanaka, I., Sakiyama, F., Masaki, T., Niimura, N.
Deposit date:2012-08-21
Release date:2013-09-11
Last modified:2018-05-16
Method:X-RAY DIFFRACTION (1.895 Å), NEUTRON DIFFRACTION
Cite:Neutron and X-ray crystallographic analysis of Achromobacter protease I at pD 8.0: protonation states and hydration structure in the free-form.
Biochim.Biophys.Acta, 1834, 2013
3HGN
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STRUCTURE OF PORCINE PANCREATIC ELASTASE COMPLEXED WITH A POTENT PEPTIDYL INHIBITOR FR130180 DETERMINED BY NEUTRON CRYSTALLOGRAPHY
Descriptor:Elastase-1, 4-[[(2S)-3-methyl-1-oxo-1-[(2S)-2-[[(3S)-1,1,1-trifluoro-4-methyl-2-oxo-pentan-3-yl]carbamoyl]pyrrolidin-1-yl]butan-2-yl]carbamoyl]benzoic acid, CALCIUM ION, ...
Authors:Tamada, T., Kinoshita, T., Kuroki, R., Tada, T.
Deposit date:2009-05-14
Release date:2009-07-28
Last modified:2011-07-13
Method:NEUTRON DIFFRACTION (1.65 Å), X-RAY DIFFRACTION
Cite:Combined High-Resolution Neutron and X-ray Analysis of Inhibited Elastase Confirms the Active-Site Oxyanion Hole but Rules against a Low-Barrier Hydrogen Bond
J.Am.Chem.Soc., 131, 2009
2ZYE
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STRUCTURE OF HIV-1 PROTEASE IN COMPLEX WITH POTENT INHIBITOR KNI-272 DETERMINED BY NEUTRON CRYSTALLOGRAPHY
Descriptor:protease, (4R)-N-tert-butyl-3-[(2S,3S)-2-hydroxy-3-({N-[(isoquinolin-5-yloxy)acetyl]-S-methyl-L-cysteinyl}amino)-4-phenylbutanoyl]-1,3-thiazolidine-4-carboxamide
Authors:Adachi, M., Ohhara, T., Tamada, T., Okazaki, N., Kuroki, R.
Deposit date:2009-01-20
Release date:2009-03-24
Last modified:2018-06-20
Method:NEUTRON DIFFRACTION (1.9 Å)
Cite:Structure of HIV-1 protease in complex with potent inhibitor KNI-272 determined by high-resolution X-ray and neutron crystallography.
Proc.Natl.Acad.Sci.USA, 2009
3FX5
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STRUCTURE OF HIV-1 PROTEASE IN COMPLEX WITH POTENT INHIBITOR KNI-272 DETERMINED BY HIGH RESOLUTION X-RAY CRYSTALLOGRAPHY
Descriptor:protease, GLYCEROL, (4R)-N-tert-butyl-3-[(2S,3S)-2-hydroxy-3-({N-[(isoquinolin-5-yloxy)acetyl]-S-methyl-L-cysteinyl}amino)-4-phenylbutanoyl]-1,3-thiazolidine-4-carboxamide
Authors:Adachi, M., Ohhara, T., Tamada, T., Okazaki, N., Kuroki, R.
Deposit date:2009-01-20
Release date:2009-03-24
Last modified:2012-12-12
Method:X-RAY DIFFRACTION (0.93 Å)
Cite:Structure of HIV-1 protease in complex with potent inhibitor KNI-272 determined by high-resolution X-ray and neutron crystallography.
Proc.Natl.Acad.Sci.USA, 2009
5GX9
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PYP MUTANT - E46Q
Descriptor:Photoactive yellow protein, 4'-HYDROXYCINNAMIC ACID
Authors:Yonezawa, K.
Deposit date:2016-09-16
Release date:2017-08-30
Last modified:2018-11-28
Method:NEUTRON DIFFRACTION (1.493 Å)
Cite:Neutron crystallography of photoactive yellow protein reveals unusual protonation state of Arg52 in the crystal
Sci Rep, 7, 2017
3HGP
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STRUCTURE OF PORCINE PANCREATIC ELASTASE COMPLEXED WITH A POTENT PEPTIDYL INHIBITOR FR130180 DETERMINED BY HIGH RESOLUTION CRYSTALLOGRAPHY
Descriptor:Elastase-1, 4-[[(2S)-3-methyl-1-oxo-1-[(2S)-2-[[(3S)-1,1,1-trifluoro-4-methyl-2-oxo-pentan-3-yl]carbamoyl]pyrrolidin-1-yl]butan-2-yl]carbamoyl]benzoic acid, CALCIUM ION, ...
Authors:Tamada, T., Kinoshita, T., Kuroki, R., Tada, T.
Deposit date:2009-05-14
Release date:2009-07-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (0.94 Å)
Cite:Combined High-Resolution Neutron and X-ray Analysis of Inhibited Elastase Confirms the Active-Site Oxyanion Hole but Rules against a Low-Barrier Hydrogen Bond
J.Am.Chem.Soc., 131, 2009
2DXM
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NEUTRON STRUCTURE ANALYSIS OF DEOXY HUMAN HEMOGLOBIN
Descriptor:Hemoglobin subunit alpha, Hemoglobin subunit beta, PROTOPORPHYRIN IX CONTAINING FE
Authors:Morimoto, Y.
Deposit date:2006-08-28
Release date:2007-12-04
Last modified:2018-12-05
Method:NEUTRON DIFFRACTION (2.1 Å)
Cite:Protonation states of buried histidine residues in human deoxyhemoglobin revealed by neutron crystallography.
J.Am.Chem.Soc., 129, 2007
2EFA
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NEUTRON CRYSTAL STRUCTURE OF CUBIC INSULIN AT PD6.6
Descriptor:Insulin
Authors:Ishikawa, T., Tanaka, I., Niimura, N.
Deposit date:2007-02-22
Release date:2008-01-22
Last modified:2018-03-07
Method:NEUTRON DIFFRACTION (2.7 Å)
Cite:A neutron crystallographic analysis of a cubic porcine insulin at pD 6.6
Chem.Phys., 345, 2008
2ZOH
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X-RAY CRYSTAL STRUCTURE OF PHOTOACTIVE YELLOW PROTEIN, WILD TYPE, AT 295K
Descriptor:Photoactive yellow protein, 4'-HYDROXYCINNAMIC ACID
Authors:Yamaguchi, S.
Deposit date:2008-05-20
Release date:2009-03-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Low-barrier hydrogen bond in photoactive yellow protein
Proc.Natl.Acad.Sci.USA, 106, 2009
2ZOI
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NEUTRON CRYSTAL STRUCTURE OF PHOTOACTIVE YELLOW PROTEIN, WILD TYPE, AT 295K
Descriptor:Photoactive yellow protein, 4'-HYDROXYCINNAMIC ACID
Authors:Yamaguchi, S.
Deposit date:2008-05-21
Release date:2009-03-24
Last modified:2018-03-07
Method:NEUTRON DIFFRACTION (1.5 Å)
Cite:Low-barrier hydrogen bond in photoactive yellow protein
Proc.Natl.Acad.Sci.USA, 106, 2009
2ZPP
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NEUTRON CRYSTAL STRUCTURE OF CUBIC INSULIN AT PD9
Descriptor:Insulin A chain, Insulin B chain
Authors:Ishikawa, T., Tanaka, I., Niimura, N.
Deposit date:2008-07-26
Release date:2008-10-28
Last modified:2018-03-07
Method:NEUTRON DIFFRACTION (2.5 Å)
Cite:An abnormal pK(a) value of internal histidine of the insulin molecule revealed by neutron crystallographic analysis
Biochem.Biophys.Res.Commun., 376, 2008
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