Author results

5NPA
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SOLUTION STRUCTURE OF DROSOPHILA MELANOGASTER LOQUACIOUS DSRBD2
Descriptor:Loquacious
Authors:Tants, J.-N., Fesser, S., Kern, T., Stehle, R., Geerlof, A., Wunderlich, C., Boettcher, R., Kunzelmann, S., Lange, O., Kreutz, C., Foerstemann, K., Sattler, M.
Deposit date:2017-04-16
Release date:2017-10-04
Last modified:2017-12-13
Method:SOLUTION NMR
Cite:Molecular basis for asymmetry sensing of siRNAs by the Drosophila Loqs-PD/Dcr-2 complex in RNA interference.
Nucleic Acids Res., 45, 2017
5NPG
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SOLUTION STRUCTURE OF DROSOPHILA MELANOGASTER LOQUACIOUS DSRBD1
Descriptor:Loquacious, isoform F
Authors:Tants, J.-N., Fesser, S., Kern, T., Stehle, R., Geerlof, A., Wunderlich, C., Hartlmuller, C., Boettcher, R., Kunzelmann, S., Lange, O., Kreutz, C., Foerstemann, K., Sattler, M.
Deposit date:2017-04-16
Release date:2017-10-04
Last modified:2017-12-13
Method:SOLUTION NMR
Cite:Molecular basis for asymmetry sensing of siRNAs by the Drosophila Loqs-PD/Dcr-2 complex in RNA interference.
Nucleic Acids Res., 45, 2017
3CJZ
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EFFECTS OF N2,N2-DIMETHYLGUANOSINE ON RNA STRUCTURE AND STABILITY: CRYSTAL STRUCTURE OF AN RNA DUPLEX WITH TANDEM M22G:A PAIRS
Descriptor:RNA (5'-R(*GP*GP*AP*CP*GP*(M2G)P*AP*CP*GP*UP*CP*CP*U)-3')
Authors:Pallan, P.S., Kreutz, C., Bosio, S., Micura, R., Egli, M.
Deposit date:2008-03-14
Release date:2008-10-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Effects of N2,N2-dimethylguanosine on RNA structure and stability: crystal structure of an RNA duplex with tandem m2 2G:A pairs.
Rna, 14, 2008
5LWJ
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SOLUTION NMR STRUCTURE OF THE GTP BINDING CLASS II RNA APTAMER-LIGAND-COMPLEX CONTAINING A PROTONATED ADENINE NUCLEOTIDE WITH A HIGHLY SHIFTED PKA.
Descriptor:GTP Class II RNA (34-MER), GUANOSINE-5'-TRIPHOSPHATE
Authors:Wolter, A.C., Weickhmann, A.K., Nasiri, A.H., Hantke, K., Ohlenschlaeger, O., Wunderlich, C.H., Kreutz, C., Duchardt-Ferner, E., Woehnert, J.
Deposit date:2016-09-17
Release date:2016-12-14
Last modified:2017-01-11
Method:SOLUTION NMR
Cite:A Stably Protonated Adenine Nucleotide with a Highly Shifted pKa Value Stabilizes the Tertiary Structure of a GTP-Binding RNA Aptamer.
Angew. Chem. Int. Ed. Engl., 56, 2017
2H1M
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SYNTHESIS, OXIDATION BEHAVIOR, CRYSTALLIZATION AND STRUCTURE OF 2'-METHYLSELENO GUANOSINE CONTAINING RNAS
Descriptor:5'-R(*GP*CP*AP*(XUG)P*AP*GP*UP*UP*AP*AP*AP*UP*CP*UP*GP*C)-3', SULFATE ION
Authors:Serganov, A.A.
Deposit date:2006-05-16
Release date:2006-07-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Synthesis, Oxidation Behavior, Crystallization and Structure of 2'-Methylseleno Guanosine Containing RNAs.
J.Am.Chem.Soc., 128, 2006
5DUN
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THE CRYSTAL STRUCTURE OF OME SUBSTITUTED TWISTER RIBOZYME
Descriptor:RNA (54-MER), MAGNESIUM ION, POTASSIUM ION
Authors:Ren, A., Patel, D.J., Micura, R., Rajashankar, K.R.
Deposit date:2015-09-19
Release date:2015-10-28
Last modified:2016-01-27
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:A Mini-Twister Variant and Impact of Residues/Cations on the Phosphodiester Cleavage of this Ribozyme Class.
Angew.Chem.Int.Ed.Engl., 54, 2015
2Q1O
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CRYSTAL STRUCTURE ANALYSIS OF THE RNA DODECAMER CGC-NF2-AAUUGGCG, WITH AN INCORPORATED 2,4-DIFLUOROTOLUYL RESIDUE (NF2)
Descriptor:RNA (5'-R(*CP*GP*CP*(NF2)P*AP*AP*UP*UP*GP*GP*CP*G)-3')
Authors:Li, F., Pallan, P.S.
Deposit date:2007-05-25
Release date:2007-10-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Crystal structure, stability and in vitro RNAi activity of oligoribonucleotides containing the ribo-difluorotoluyl nucleotide: insights into substrate requirements by the human RISC Ago2 enzyme.
Nucleic Acids Res., 35, 2007
2Q1R
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CRYSTAL STRUCTURE ANALYSIS OF THE RNA DODECAMER CGCGAAUUAGCG, WITH A G-A MISMATCH.
Descriptor:RNA (5'-R(*CP*GP*CP*GP*AP*AP*UP*UP*AP*GP*CP*G)-3'), MAGNESIUM ION
Authors:Li, F., Pallan, P.S.
Deposit date:2007-05-25
Release date:2007-10-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.12 Å)
Cite:Crystal structure, stability and in vitro RNAi activity of oligoribonucleotides containing the ribo-difluorotoluyl nucleotide: insights into substrate requirements by the human RISC Ago2 enzyme.
Nucleic Acids Res., 35, 2007
3S7C
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CRYSTAL STRUCTURE OF A 2'-AZIDO-URIDINE-MODIFIED RNA
Descriptor:Ecoli 23 S rRNA Sarcin Ricin loop
Authors:Ennifar, E., Micura, R.
Deposit date:2011-05-26
Release date:2012-04-11
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:2'-Azido RNA, a Versatile Tool for Chemical Biology: Synthesis, X-ray Structure, siRNA Applications, Click Labeling.
Acs Chem.Biol., 7, 2012
3S8U
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CRYSTAL STRUCTURE OF A 2-AZIDO-ADENINE-MODIFIED RNA
Descriptor:Ecoli 23 S rRNA Sarcin Ricin loop
Authors:Ennifar, E., Micura, R.
Deposit date:2011-05-31
Release date:2012-04-11
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:2'-Azido RNA, a Versatile Tool for Chemical Biology: Synthesis, X-ray Structure, siRNA Applications, Click Labeling.
Acs Chem.Biol., 7, 2012
4QGK
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STRUCTURE OF THE HUMAN SJOGREN LARSSON SYNDROME ENZYME FATTY ALDEHYDE DEHYDROGENASE (FALDH)
Descriptor:Fatty aldehyde dehydrogenase
Authors:Zander, U., Keller, M., Marquez, J.A.
Deposit date:2014-05-23
Release date:2014-07-30
Last modified:2018-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A gatekeeper helix determines the substrate specificity of Sjogren-Larsson Syndrome enzyme fatty aldehyde dehydrogenase.
Nat Commun, 5, 2014
4Y27
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E.COLI 23S SARCIN-RICIL LOOP, MODIFIED WITH A 2-ME ON G2661 AND A METHYLPHOSPHONATE ON A2662
Descriptor:27-mer SRL RNA
Authors:Ennifar, E., Micura, R., Fluer, S.
Deposit date:2015-02-09
Release date:2015-11-18
Method:X-RAY DIFFRACTION (0.998 Å)
Cite:Role of a ribosomal RNA phosphate oxygen during the EF-G-triggered GTP hydrolysis.
Proc.Natl.Acad.Sci.USA, 112, 2015
5K7C
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THE NATIVE STRUCTURE OF NATIVE PISTOL RIBOZYME
Descriptor:RNA 47-MER, DNA/RNA 11-MER, MAGNESIUM ION
Authors:Ren, A., Patel, D.
Deposit date:2016-05-26
Release date:2016-07-13
Last modified:2016-08-31
Method:X-RAY DIFFRACTION (2.73 Å)
Cite:Pistol ribozyme adopts a pseudoknot fold facilitating site-specific in-line cleavage.
Nat.Chem.Biol., 12, 2016
5K7D
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THE STRUCTURE OF NATIVE PISTOL RIBOZYME, BOUND TO IRIDIUM
Descriptor:RNA 47-MER, DNA/RNA 11-MER, IRIDIUM HEXAMMINE ION, ...
Authors:Ren, A., Patel, D.
Deposit date:2016-05-26
Release date:2016-07-13
Last modified:2016-08-31
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Pistol ribozyme adopts a pseudoknot fold facilitating site-specific in-line cleavage.
Nat.Chem.Biol., 12, 2016
5K7E
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THE STRUCTURE OF PISTOL RIBOZYME, SOAKED WITH MN2+
Descriptor:RNA 47-MER, DNA/RNA 11-MER, MANGANESE (II) ION
Authors:Ren, A., Patel, D.
Deposit date:2016-05-26
Release date:2016-07-13
Last modified:2016-08-31
Method:X-RAY DIFFRACTION (3.27 Å)
Cite:Pistol ribozyme adopts a pseudoknot fold facilitating site-specific in-line cleavage.
Nat.Chem.Biol., 12, 2016
6HAG
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THE STRUCTURE OF THE SAM/SAH-BINDING RIBOSWITCH.
Descriptor:SAM Riboswitch, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Weickhmann, A.K.
Deposit date:2018-08-07
Release date:2019-01-09
Last modified:2019-03-20
Method:SOLUTION NMR
Cite:The structure of the SAM/SAH-binding riboswitch.
Nucleic Acids Res., 47, 2019