Author results

1ORR
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CRYSTAL STRUCTURE OF CDP-TYVELOSE 2-EPIMERASE COMPLEXED WITH NAD AND CDP
Descriptor:CDP-tyvelose-2-epimerase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, CYTIDINE-5'-DIPHOSPHATE
Authors:Koropatkin, N.M., Liu, H., Holden, H.M.
Deposit date:2003-03-14
Release date:2003-08-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:High Resolution X-ray Structure of Tyvelose Epimerase from Salmonella typhi
J.Biol.Chem., 278, 2003
1TZF
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X-RAY CRYSTAL STRUCTURE OF ALPHA-D-GLUCOSE-1-PHOSPHATE CYTIDYLYLTRANSFERASE FROM SALMONELLA TYPHI
Descriptor:Glucose-1-phosphate cytidylyltransferase, MAGNESIUM ION, [CYTIDINE-5'-PHOSPHATE]-BETA-GLUCOSYL-PHOSPHORIC ACID ESTER
Authors:Koropatkin, N.M., Holden, H.M.
Deposit date:2004-07-09
Release date:2004-09-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Molecular structure of alpha-D-glucose-1-phosphate cytidylyltransferase from Salmonella typhi
J.Biol.Chem., 279, 2004
1WVC
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ALPHA-D-GLUCOSE-1-PHOSPHATE CYTIDYLYLTRANSFERASE COMPLEXED WITH CTP
Descriptor:Glucose-1-phosphate cytidylyltransferase, MAGNESIUM ION, NICKEL (II) ION, ...
Authors:Koropatkin, N.M., Cleland, W.W., Holden, H.M.
Deposit date:2004-12-14
Release date:2005-01-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Kinetic and structural analysis of alpha-D-Glucose-1-phosphate cytidylyltransferase from Salmonella typhi.
J.Biol.Chem., 280, 2005
1WVG
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STRUCTURE OF CDP-D-GLUCOSE 4,6-DEHYDRATASE FROM SALMONELLA TYPHI
Descriptor:CDP-glucose 4,6-dehydratase, ADENOSINE-5-DIPHOSPHORIBOSE, CYTIDINE-5'-DIPHOSPHO-BETA-D-XYLOSE
Authors:Koropatkin, N.M., Holden, H.M.
Deposit date:2004-12-15
Release date:2005-01-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of CDP-D-glucose 4,6-dehydratase from Salmonella typhi complexed with CDP-D-xylose.
Acta Crystallogr.,Sect.D, 61, 2005
2G29
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CRYSTAL STRUCTURE OF THE PERIPLASMIC NITRATE-BINDING PROTEIN NRTA FROM SYNECHOCYSTIS PCC 6803
Descriptor:Nitrate transport protein nrtA, NITRATE ION
Authors:Koropatkin, N.M., Pakrasi, H.B., Smith, T.J.
Deposit date:2006-02-15
Release date:2006-07-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Atomic structure of a nitrate-binding protein crucial for photosynthetic productivity
Proc.Natl.Acad.Sci.Usa, 103, 2006
2I48
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CRYSTAL STRUCTURE OF BICARBONATE TRANSPORT PROTEIN CMPA FROM SYNECHOCYSTIS SP. PCC 6803 IN COMPLEX WITH CARBONIC ACID
Descriptor:Bicarbonate transporter, CARBONATE ION
Authors:Koropatkin, N.M., Smith, T.J., Pakrasi, H.B.
Deposit date:2006-08-21
Release date:2006-12-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The Structure of a Cyanobacterial Bicarbonate Transport Protein, CmpA.
J.Biol.Chem., 282, 2007
2I49
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CRYSTAL STRUCTURE OF APO FORM OF BICARBONATE TRANSPORT PROTEIN CMPA FROM SYNECHOCYSTIS SP. PCC 6803
Descriptor:Bicarbonate transporter
Authors:Koropatkin, N.M., Smith, T.J., Pakrasi, H.B.
Deposit date:2006-08-21
Release date:2006-12-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:The Structure of a Cyanobacterial Bicarbonate Transport Protein, CmpA.
J.Biol.Chem., 282, 2007
2I4B
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CRYSTAL STRUCTURE OF BICARBONATE TRANSPORT PROTEIN CMPA FROM SYNECHOCYSTIS SP. PCC 6803 IN COMPLEX WITH BICARBONATE AND CALCIUM
Descriptor:Bicarbonate transporter, BICARBONATE ION, CALCIUM ION
Authors:Koropatkin, N.M., Smith, T.J., Pakrasi, H.B.
Deposit date:2006-08-21
Release date:2006-12-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:The Structure of a Cyanobacterial Bicarbonate Transport Protein, CmpA.
J.Biol.Chem., 282, 2007
2I4C
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CRYSTAL STRUCTURE OF BICARBONATE TRANSPORT PROTEIN CMPA FROM SYNECHOCYSTIS SP. PCC 6803 IN COMPLEX WITH BICARBONATE AND CALCIUM
Descriptor:Bicarbonate transporter, BICARBONATE ION, CALCIUM ION
Authors:Koropatkin, N.M., Smith, T.J., Pakrasi, H.B.
Deposit date:2006-08-21
Release date:2006-12-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Structure of a Cyanobacterial Bicarbonate Transport Protein, CmpA.
J.Biol.Chem., 282, 2007
3CK7
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B. THETAIOTAOMICRON SUSD WITH ALPHA-CYCLODEXTRIN
Descriptor:SusD, CALCIUM ION, ALPHA-CYCLODEXTRIN (CYCLOHEXA-AMYLOSE)
Authors:Koropatkin, N.M., Martens, E.C., Gordon, J.I., Smith, T.J.
Deposit date:2008-03-14
Release date:2008-04-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Starch catabolism by a prominent human gut symbiont is directed by the recognition of amylose helices.
Structure, 16, 2008
3CK8
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B. THETAIOTAOMICRON SUSD WITH BETA-CYCLODEXTRIN
Descriptor:SusD, BETA-CYCLODEXTRIN, CALCIUM ION, ...
Authors:Koropatkin, N.M., Martens, E.C., Gordon, J.I., Smith, T.J.
Deposit date:2008-03-14
Release date:2008-04-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Starch catabolism by a prominent human gut symbiont is directed by the recognition of amylose helices.
Structure, 16, 2008
3CK9
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B. THETAIOTAOMICRON SUSD WITH MALTOHEPTAOSE
Descriptor:SusD, ALPHA-D-GLUCOSE, CALCIUM ION, ...
Authors:Koropatkin, N.M., Martens, E.C., Gordon, J.I., Smith, T.J.
Deposit date:2008-03-14
Release date:2008-05-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Starch catabolism by a prominent human gut symbiont is directed by the recognition of amylose helices.
Structure, 16, 2008
3CKB
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B. THETAIOTAOMICRON SUSD WITH MALTOTRIOSE
Descriptor:SusD, CALCIUM ION, MALTOTRIOSE
Authors:Koropatkin, N.M., Martens, E.C., Gordon, J.I., Smith, T.J.
Deposit date:2008-03-14
Release date:2008-04-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Starch catabolism by a prominent human gut symbiont is directed by the recognition of amylose helices.
Structure, 16, 2008
3CKC
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B. THETAIOTAOMICRON SUSD
Descriptor:SusD, CALCIUM ION, 1,2-ETHANEDIOL, ...
Authors:Koropatkin, N.M., Martens, E.C., Gordon, J.I., Smith, T.J.
Deposit date:2008-03-14
Release date:2008-04-01
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Starch catabolism by a prominent human gut symbiont is directed by the recognition of amylose helices.
Structure, 16, 2008
3F11
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STRUCTURE OF FUTA1 WITH IRON(III)
Descriptor:Iron transport protein, FE (III) ION, SULFATE ION, ...
Authors:Koropatkin, N.M., Randich, A.M., Bhattachryya-Pakrasi, M., Pakrasi, H.B., Smith, T.J.
Deposit date:2008-10-27
Release date:2008-11-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:The structure of the iron-binding protein, FutA1, from Synechocystis 6803
J.Biol.Chem., 282, 2007
3K8K
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CRYSTAL STRUCTURE OF SUSG
Descriptor:Alpha-amylase, susG, MAGNESIUM ION, ...
Authors:Koropatkin, N.M., Smith, T.J.
Deposit date:2009-10-14
Release date:2010-03-02
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:SusG: A Unique Cell-Membrane-Associated alpha-Amylase from a Prominent Human Gut Symbiont Targets Complex Starch Molecules.
Structure, 18, 2010
3K8L
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CRYSTAL STRUCTURE OF SUSG-D498N MUTANT WITH MALTOHEPTAOSE
Descriptor:Alpha-amylase, susG, CALCIUM ION, ...
Authors:Koropatkin, N.M., Smith, T.J.
Deposit date:2009-10-14
Release date:2010-03-02
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:SusG: A Unique Cell-Membrane-Associated alpha-Amylase from a Prominent Human Gut Symbiont Targets Complex Starch Molecules.
Structure, 18, 2010
3K8M
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CRYSTAL STRUCTURE OF SUSG WITH ACARBOSE
Descriptor:Alpha-amylase, susG, ACARBOSE DERIVED TRISACCHARIDE, ...
Authors:Koropatkin, N.M., Smith, T.J.
Deposit date:2009-10-14
Release date:2010-03-02
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:SusG: A Unique Cell-Membrane-Associated alpha-Amylase from a Prominent Human Gut Symbiont Targets Complex Starch Molecules.
Structure, 18, 2010
6DK2
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BACTEROIDETES AC2A SUSD-LIKE
Descriptor:SusD, SULFATE ION, 1,2-ETHANEDIOL, ...
Authors:Koropatkin, N.M.
Deposit date:2018-05-28
Release date:2018-08-01
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:To Be Published
To Be Published
4FCH
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CRYSTAL STRUCTURE SUSE FROM BACTEROIDES THETAIOTAOMICRON WITH MALTOHEPTAOSE
Descriptor:Outer membrane protein SusE, ALPHA-D-GLUCOSE, SULFATE ION, ...
Authors:Koropatkin, N.M., Cameron, E.A., Martens, E.C.
Deposit date:2012-05-24
Release date:2012-08-29
Last modified:2012-10-24
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Multidomain Carbohydrate-binding Proteins Involved in Bacteroides thetaiotaomicron Starch Metabolism.
J.Biol.Chem., 287, 2012
4FE9
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CRYSTAL STRUCTURE OF SUSF FROM BACTEROIDES THETAIOTAOMICRON
Descriptor:Outer membrane protein SusF, ALPHA-D-GLUCOSE, BETA-D-GLUCOSE, ...
Authors:Koropatkin, N.M., Cameron, E.A., Martens, E.C.
Deposit date:2012-05-29
Release date:2012-08-29
Last modified:2012-10-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Multidomain Carbohydrate-binding Proteins Involved in Bacteroides thetaiotaomicron Starch Metabolism.
J.Biol.Chem., 287, 2012
4FEM
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STRUCTURE OF SUSE WITH ALPHA-CYCLODEXTRIN
Descriptor:Outer membrane protein SusE, ALPHA-CYCLODEXTRIN (CYCLOHEXA-AMYLOSE), 1,2-ETHANEDIOL
Authors:Koropatkin, N.M., Cameron, E.A., Martens, E.C.
Deposit date:2012-05-30
Release date:2012-08-29
Last modified:2012-10-24
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Multidomain Carbohydrate-binding Proteins Involved in Bacteroides thetaiotaomicron Starch Metabolism.
J.Biol.Chem., 287, 2012
4UA8
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EUR_01830 (MALTOTRIOSE-BINDING PROTEIN) COMPLEXED WITH MALTOTRIOSE
Descriptor:Carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-), MALTOTRIOSE, ...
Authors:Koropatkin, N.M., Orlovsky, N.I.
Deposit date:2014-08-08
Release date:2014-12-03
Last modified:2017-09-27
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Molecular details of a starch utilization pathway in the human gut symbiont Eubacterium rectale.
Mol.Microbiol., 95, 2015
4UAC
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EUR_01830 WITH ACARBOSE
Descriptor:Carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-), ALPHA-ACARBOSE, ...
Authors:Koropatkin, N.M., Orlovsky, N.I.
Deposit date:2014-08-08
Release date:2014-12-10
Last modified:2017-09-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Molecular details of a starch utilization pathway in the human gut symbiont Eubacterium rectale.
Mol.Microbiol., 95, 2015
5CJZ
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BT4246 WITH GALACTOSE
Descriptor:SusD homolog, POTASSIUM ION, CALCIUM ION, ...
Authors:Koropatkin, N.M.
Deposit date:2015-07-15
Release date:2016-10-12
Method:X-RAY DIFFRACTION (1.803 Å)
Cite:Mechanistic insight into mucin degradation by the human gut microbiota reveals targeting of the glycoprotein core
to be published
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