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1WVC
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BU of 1wvc by Molmil
alpha-D-glucose-1-phosphate cytidylyltransferase complexed with CTP
Descriptor: CYTIDINE-5'-TRIPHOSPHATE, Glucose-1-phosphate cytidylyltransferase, MAGNESIUM ION, ...
Authors:Koropatkin, N.M, Cleland, W.W, Holden, H.M.
Deposit date:2004-12-14
Release date:2005-01-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Kinetic and structural analysis of alpha-D-Glucose-1-phosphate cytidylyltransferase from Salmonella typhi.
J.Biol.Chem., 280, 2005
1WVG
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BU of 1wvg by Molmil
Structure of CDP-D-glucose 4,6-dehydratase from Salmonella typhi
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, CDP-glucose 4,6-dehydratase, CYTIDINE-5'-DIPHOSPHO-BETA-D-XYLOSE
Authors:Koropatkin, N.M, Holden, H.M.
Deposit date:2004-12-15
Release date:2005-01-26
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of CDP-D-glucose 4,6-dehydratase from Salmonella typhi complexed with CDP-D-xylose.
Acta Crystallogr.,Sect.D, 61, 2005
1TZF
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BU of 1tzf by Molmil
X-ray Crystal Structure of alpha-D-glucose-1-phosphate cytidylyltransferase from Salmonella typhi
Descriptor: Glucose-1-phosphate cytidylyltransferase, MAGNESIUM ION, [CYTIDINE-5'-PHOSPHATE]-BETA-GLUCOSYL-PHOSPHORIC ACID ESTER
Authors:Koropatkin, N.M, Holden, H.M.
Deposit date:2004-07-09
Release date:2004-09-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Molecular structure of alpha-D-glucose-1-phosphate cytidylyltransferase from Salmonella typhi
J.Biol.Chem., 279, 2004
2G29
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BU of 2g29 by Molmil
crystal structure of the periplasmic nitrate-binding protein NrtA from Synechocystis PCC 6803
Descriptor: NITRATE ION, Nitrate transport protein nrtA
Authors:Koropatkin, N.M, Pakrasi, H.B, Smith, T.J.
Deposit date:2006-02-15
Release date:2006-07-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Atomic structure of a nitrate-binding protein crucial for photosynthetic productivity
Proc.Natl.Acad.Sci.Usa, 103, 2006
1ORR
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BU of 1orr by Molmil
Crystal Structure of CDP-Tyvelose 2-Epimerase complexed with NAD and CDP
Descriptor: CDP-tyvelose-2-epimerase, CYTIDINE-5'-DIPHOSPHATE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Koropatkin, N.M, Liu, H, Holden, H.M.
Deposit date:2003-03-14
Release date:2003-08-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:High Resolution X-ray Structure of Tyvelose Epimerase from Salmonella typhi
J.Biol.Chem., 278, 2003
3K8K
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BU of 3k8k by Molmil
Crystal structure of SusG
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Alpha-amylase, ...
Authors:Koropatkin, N.M, Smith, T.J.
Deposit date:2009-10-14
Release date:2010-03-02
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:SusG: A Unique Cell-Membrane-Associated alpha-Amylase from a Prominent Human Gut Symbiont Targets Complex Starch Molecules.
Structure, 18, 2010
3K8L
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BU of 3k8l by Molmil
Crystal structure of SusG-D498N mutant with maltoheptaose
Descriptor: 1,2-ETHANEDIOL, Alpha-amylase, susG, ...
Authors:Koropatkin, N.M, Smith, T.J.
Deposit date:2009-10-14
Release date:2010-03-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:SusG: A Unique Cell-Membrane-Associated alpha-Amylase from a Prominent Human Gut Symbiont Targets Complex Starch Molecules.
Structure, 18, 2010
3K8M
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BU of 3k8m by Molmil
Crystal structure of SusG with acarbose
Descriptor: 1,2-ETHANEDIOL, 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ...
Authors:Koropatkin, N.M, Smith, T.J.
Deposit date:2009-10-14
Release date:2010-03-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:SusG: A Unique Cell-Membrane-Associated alpha-Amylase from a Prominent Human Gut Symbiont Targets Complex Starch Molecules.
Structure, 18, 2010
2I4B
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BU of 2i4b by Molmil
Crystal structure of Bicarbonate Transport Protein CmpA from Synechocystis sp. PCC 6803 in complex with bicarbonate and calcium
Descriptor: BICARBONATE ION, Bicarbonate transporter, CALCIUM ION
Authors:Koropatkin, N.M, Smith, T.J, Pakrasi, H.B.
Deposit date:2006-08-21
Release date:2006-12-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:The Structure of a Cyanobacterial Bicarbonate Transport Protein, CmpA.
J.Biol.Chem., 282, 2007
2I48
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BU of 2i48 by Molmil
Crystal structure of Bicarbonate Transport Protein CmpA from Synechocystis sp. PCC 6803 in complex with carbonic acid
Descriptor: Bicarbonate transporter, CARBONATE ION
Authors:Koropatkin, N.M, Smith, T.J, Pakrasi, H.B.
Deposit date:2006-08-21
Release date:2006-12-19
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The Structure of a Cyanobacterial Bicarbonate Transport Protein, CmpA.
J.Biol.Chem., 282, 2007
2I49
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BU of 2i49 by Molmil
Crystal structure of apo form of Bicarbonate Transport Protein CmpA from Synechocystis sp. PCC 6803
Descriptor: Bicarbonate transporter
Authors:Koropatkin, N.M, Smith, T.J, Pakrasi, H.B.
Deposit date:2006-08-21
Release date:2006-12-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:The Structure of a Cyanobacterial Bicarbonate Transport Protein, CmpA.
J.Biol.Chem., 282, 2007
2I4C
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BU of 2i4c by Molmil
Crystal structure of Bicarbonate Transport Protein CmpA from Synechocystis sp. PCC 6803 in complex with bicarbonate and calcium
Descriptor: BICARBONATE ION, Bicarbonate transporter, CALCIUM ION
Authors:Koropatkin, N.M, Smith, T.J, Pakrasi, H.B.
Deposit date:2006-08-21
Release date:2006-12-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Structure of a Cyanobacterial Bicarbonate Transport Protein, CmpA.
J.Biol.Chem., 282, 2007
3CKC
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BU of 3ckc by Molmil
B. thetaiotaomicron SusD
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Koropatkin, N.M, Martens, E.C, Gordon, J.I, Smith, T.J.
Deposit date:2008-03-14
Release date:2008-04-01
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Starch catabolism by a prominent human gut symbiont is directed by the recognition of amylose helices.
Structure, 16, 2008
3CKB
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BU of 3ckb by Molmil
B. thetaiotaomicron SusD with maltotriose
Descriptor: CALCIUM ION, SusD, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Koropatkin, N.M, Martens, E.C, Gordon, J.I, Smith, T.J.
Deposit date:2008-03-14
Release date:2008-04-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Starch catabolism by a prominent human gut symbiont is directed by the recognition of amylose helices.
Structure, 16, 2008
3CK7
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BU of 3ck7 by Molmil
B. thetaiotaomicron SusD with alpha-cyclodextrin
Descriptor: CALCIUM ION, Cyclohexakis-(1-4)-(alpha-D-glucopyranose), SusD
Authors:Koropatkin, N.M, Martens, E.C, Gordon, J.I, Smith, T.J.
Deposit date:2008-03-14
Release date:2008-04-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Starch catabolism by a prominent human gut symbiont is directed by the recognition of amylose helices.
Structure, 16, 2008
3CK8
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BU of 3ck8 by Molmil
B. thetaiotaomicron SusD with beta-cyclodextrin
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Cycloheptakis-(1-4)-(alpha-D-glucopyranose), ...
Authors:Koropatkin, N.M, Martens, E.C, Gordon, J.I, Smith, T.J.
Deposit date:2008-03-14
Release date:2008-04-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Starch catabolism by a prominent human gut symbiont is directed by the recognition of amylose helices.
Structure, 16, 2008
3CK9
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BU of 3ck9 by Molmil
B. thetaiotaomicron SusD with maltoheptaose
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, SusD, ...
Authors:Koropatkin, N.M, Martens, E.C, Gordon, J.I, Smith, T.J.
Deposit date:2008-03-14
Release date:2008-05-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Starch catabolism by a prominent human gut symbiont is directed by the recognition of amylose helices.
Structure, 16, 2008
3F11
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BU of 3f11 by Molmil
Structure of futa1 with iron(III)
Descriptor: 1,2-ETHANEDIOL, FE (III) ION, Iron transport protein, ...
Authors:Koropatkin, N.M, Randich, A.M, Bhattachryya-Pakrasi, M, Pakrasi, H.B, Smith, T.J.
Deposit date:2008-10-27
Release date:2008-11-25
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:The structure of the iron-binding protein, FutA1, from Synechocystis 6803
J.Biol.Chem., 282, 2007
6DK2
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BU of 6dk2 by Molmil
Bacteroidetes AC2a SusD-like
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, SULFATE ION, ...
Authors:Koropatkin, N.M.
Deposit date:2018-05-28
Release date:2018-08-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:To Be Published
To Be Published
7JJN
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BU of 7jjn by Molmil
Eubacterium rectale Amy13B (EUR_01860)
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, GLYCEROL, ...
Authors:Koropatkin, N.M, Cockburn, D.W, Cerqueira, F.M.
Deposit date:2020-07-27
Release date:2021-06-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The structures of the GH13_36 amylases from Eubacterium rectale and Ruminococcus bromii reveal subsite architectures that favor maltose production
Amylase, 4, 2020
4UA8
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BU of 4ua8 by Molmil
EUR_01830 (maltotriose-binding protein) complexed with maltotriose
Descriptor: 1,2-ETHANEDIOL, Carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-), ...
Authors:Koropatkin, N.M, Orlovsky, N.I.
Deposit date:2014-08-08
Release date:2014-12-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Molecular details of a starch utilization pathway in the human gut symbiont Eubacterium rectale.
Mol.Microbiol., 95, 2015
4UAC
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BU of 4uac by Molmil
EUR_01830 with acarbose
Descriptor: 1,2-ETHANEDIOL, 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, Carbohydrate ABC transporter substrate-binding protein, ...
Authors:Koropatkin, N.M, Orlovsky, N.I.
Deposit date:2014-08-08
Release date:2014-12-10
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Molecular details of a starch utilization pathway in the human gut symbiont Eubacterium rectale.
Mol.Microbiol., 95, 2015
6NE9
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BU of 6ne9 by Molmil
Bacteroides intestinalis acetyl xylan esterase (BACINT_01039)
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Koropatkin, N.M, Pereira, G.V, Cann, I.
Deposit date:2018-12-17
Release date:2019-12-25
Last modified:2021-01-27
Method:X-RAY DIFFRACTION (1.738 Å)
Cite:Degradation of complex arabinoxylans by human colonic Bacteroidetes
Nat Commun, 2021
5J5U
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BU of 5j5u by Molmil
Fjoh_4561 chitin-binding protein
Descriptor: RagB/SusD domain protein
Authors:Koropatkin, N.M.
Deposit date:2016-04-03
Release date:2017-02-08
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A polysaccharide utilization locus from Flavobacterium johnsoniae enables conversion of recalcitrant chitin.
Biotechnol Biofuels, 9, 2016
5J90
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BU of 5j90 by Molmil
Structure of Fjoh_4558, a chitin-binding SusD homolog from Flavobacterium johnsoniae
Descriptor: 1,2-ETHANEDIOL, RagB/SusD domain protein
Authors:Koropatkin, N.M.
Deposit date:2016-04-08
Release date:2017-02-08
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.3932 Å)
Cite:A polysaccharide utilization locus from Flavobacterium johnsoniae enables conversion of recalcitrant chitin.
Biotechnol Biofuels, 9, 2016

 

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