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4NER
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BU of 4ner by Molmil
Multicopper Oxidase CueO (data1)
Descriptor: Blue copper oxidase CueO, COPPER (II) ION, HYDROXIDE ION, ...
Authors:Komori, H, Kataoka, K, Sakurai, T, Higuchi, Y.
Deposit date:2013-10-30
Release date:2014-03-12
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:New insights into the catalytic active-site structure of multicopper oxidases.
Acta Crystallogr.,Sect.D, 70, 2014
5XHU
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BU of 5xhu by Molmil
Crystal structure of ycgT from bacillus subtilis
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Ferredoxin--NADP reductase
Authors:Komori, H.
Deposit date:2017-04-24
Release date:2018-05-02
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of ycgT from bacillus subtilis
To Be Published
1REP
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BU of 1rep by Molmil
CRYSTAL STRUCTURE OF REPLICATION INITIATOR PROTEIN REPE54 OF MINI-F PLASMID COMPLEXED WITH AN ITERON DNA
Descriptor: DNA (5'-D(*CP*CP*TP*GP*TP*GP*AP*CP*AP*AP*AP*TP*TP*GP*CP*CP*CP*TP*CP*AP*GP*T)-3'), DNA (5'-D(*CP*TP*GP*AP*GP*GP*GP*CP*AP*AP*TP*TP*TP*GP*TP*CP*AP*CP*AP*GP*GP*T)-3'), MAGNESIUM ION, ...
Authors:Komori, H, Matsunaga, F, Higuchi, Y, Ishiai, M, Wada, C, Miki, K.
Deposit date:1999-04-29
Release date:2000-02-09
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of a prokaryotic replication initiator protein bound to DNA at 2.6 A resolution.
EMBO J., 18, 1999
4EF3
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BU of 4ef3 by Molmil
Multicopper Oxidase CueO (Citrate buffer)
Descriptor: Blue copper oxidase CueO, CITRIC ACID, COPPER (II) ION, ...
Authors:Komori, H, Kataoka, K, Sakurai, T, Higuchi, Y.
Deposit date:2012-03-29
Release date:2013-05-22
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Exogenous acetate ion reaches the type II copper centre in CueO through the water-excretion channel and potentially affects the enzymatic activity.
Acta Crystallogr.,Sect.F, 72, 2016
4HAK
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BU of 4hak by Molmil
Multicopper Oxidase CueO mutant E506A
Descriptor: ACETATE ION, Blue copper oxidase CueO, COPPER (II) ION, ...
Authors:Komori, H, Kataoka, K, Sakurai, T, Higuchi, Y.
Deposit date:2012-09-26
Release date:2013-10-30
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Multicopper Oxidase CueO mutant E506A
TO BE PUBLISHED
4HAL
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BU of 4hal by Molmil
Multicopper Oxidase CueO mutant E506I
Descriptor: ACETATE ION, Blue copper oxidase CueO, COPPER (II) ION, ...
Authors:Komori, H, Kataoka, K, Sakurai, T, Higuchi, Y.
Deposit date:2012-09-26
Release date:2013-10-30
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Multicopper Oxidase CueO mutant E506I
TO BE PUBLISHED
3LZX
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BU of 3lzx by Molmil
Crystal structure of ferredoxin-NADP+ oxidoreductase from Bacillus subtilis (FORM II)
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Ferredoxin--NADP reductase 2, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Komori, H, Seo, D, Sakurai, T, Higuchi, Y.
Deposit date:2010-03-02
Release date:2010-12-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure analysis of Bacillus subtilis ferredoxin-NADP(+) oxidoreductase and the structural basis for its substrate selectivity
Protein Sci., 19, 2010
3LZW
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BU of 3lzw by Molmil
Crystal structure of ferredoxin-NADP+ oxidoreductase from bacillus subtilis (form I)
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Ferredoxin--NADP reductase 2, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Komori, H, Seo, D, Sakurai, T, Higuchi, Y.
Deposit date:2010-03-02
Release date:2010-12-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure analysis of Bacillus subtilis ferredoxin-NADP(+) oxidoreductase and the structural basis for its substrate selectivity
Protein Sci., 19, 2010
4E1O
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BU of 4e1o by Molmil
Human histidine decarboxylase complex with Histidine methyl ester (HME)
Descriptor: HISTIDINE-METHYL-ESTER, Histidine decarboxylase, PYRIDOXAL-5'-PHOSPHATE
Authors:Komori, H, Nitta, Y, Ueno, H, Higuchi, Y.
Deposit date:2012-03-06
Release date:2012-07-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural study reveals that Ser-354 determines substrate specificity on human histidine decarboxylase
J.Biol.Chem., 287, 2012
7EIX
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BU of 7eix by Molmil
Human histidine decarboxylase mutant Y334F
Descriptor: Histidine decarboxylase, PYRIDOXAL-5'-PHOSPHATE, SULFATE ION
Authors:Komori, H.
Deposit date:2021-04-01
Release date:2022-04-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural analysis of the HDC Y334F mutant
J Biol Macromol, 21, 2021
7EIY
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BU of 7eiy by Molmil
Human histidine decarboxylase mutant Y334F soaking with histidine
Descriptor: HISTIDINE, Histidine decarboxylase, PYRIDOXAL-5'-PHOSPHATE, ...
Authors:Komori, H.
Deposit date:2021-04-01
Release date:2022-04-06
Last modified:2023-04-19
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural analysis of the HDC Y334F mutant
J Biol Macromol, 21, 2021
7EIW
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BU of 7eiw by Molmil
Human histidine decarboxylase mutant Y334F reacted with histidine
Descriptor: Histidine decarboxylase, PYRIDOXAL-5'-PHOSPHATE
Authors:Komori, H.
Deposit date:2021-04-01
Release date:2022-04-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural analysis of the HDC Y334F mutant
J Biol Macromol, 21, 2021
1IQU
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BU of 1iqu by Molmil
Crystal structure of photolyase-thymine complex
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, PHOSPHATE ION, THYMINE, ...
Authors:Komori, H, Masui, R, Kuramitsu, S, Yokoyama, S, Shibata, T, Inoue, Y, Miki, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2001-08-03
Release date:2002-05-08
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of thermostable DNA photolyase: pyrimidine-dimer recognition mechanism.
Proc.Natl.Acad.Sci.USA, 98, 2001
1IQR
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BU of 1iqr by Molmil
Crystal structure of DNA photolyase from Thermus thermophilus
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, PHOSPHATE ION, photolyase
Authors:Komori, H, Masui, R, Kuramitsu, S, Yokoyama, S, Shibata, T, Inoue, Y, Miki, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2001-07-27
Release date:2001-11-28
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of thermostable DNA photolyase: pyrimidine-dimer recognition mechanism.
Proc.Natl.Acad.Sci.USA, 98, 2001
4E9Y
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BU of 4e9y by Molmil
Multicopper Oxidase mgLAC (data4)
Descriptor: CHLORIDE ION, COPPER (II) ION, Multicopper oxidase, ...
Authors:Komori, H, Miyazaki, K, Higuchi, Y.
Deposit date:2012-03-21
Release date:2013-03-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:New insights into the catalytic active-site structure of multicopper oxidases.
Acta Crystallogr.,Sect.D, 70, 2014
4E9W
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BU of 4e9w by Molmil
Multicopper Oxidase mgLAC (data2)
Descriptor: CHLORIDE ION, COPPER (II) ION, Multicopper oxidase, ...
Authors:Komori, H, Miyazaki, K, Higuchi, Y.
Deposit date:2012-03-21
Release date:2013-03-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:New insights into the catalytic active-site structure of multicopper oxidases.
Acta Crystallogr.,Sect.D, 70, 2014
4E9X
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BU of 4e9x by Molmil
Multicopper Oxidase mgLAC (data3)
Descriptor: CHLORIDE ION, COPPER (II) ION, Multicopper oxidase, ...
Authors:Komori, H, Miyazaki, K, Higuchi, Y.
Deposit date:2012-03-21
Release date:2013-03-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:New insights into the catalytic active-site structure of multicopper oxidases.
Acta Crystallogr.,Sect.D, 70, 2014
4E9V
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BU of 4e9v by Molmil
Multicopper Oxidase mgLAC (data1)
Descriptor: CHLORIDE ION, COPPER (II) ION, HYDROXIDE ION, ...
Authors:Komori, H, Miyazaki, K, Higuchi, Y.
Deposit date:2012-03-21
Release date:2013-03-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:New insights into the catalytic active-site structure of multicopper oxidases.
Acta Crystallogr.,Sect.D, 70, 2014
2ZWN
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BU of 2zwn by Molmil
Crystal structure of the novel two-domain type laccase from a metagenome
Descriptor: CHLORIDE ION, COPPER (II) ION, CU-O-CU LINKAGE, ...
Authors:Komori, H, Miyazaki, K, Higuchi, Y.
Deposit date:2008-12-17
Release date:2009-04-07
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:X-ray structure of a two-domain type laccase: a missing link in the evolution of multi-copper proteins
Febs Lett., 583, 2009
3UAC
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BU of 3uac by Molmil
Multicopper Oxidase CueO mutant C500SE506Q (data4)
Descriptor: ACETATE ION, Blue copper oxidase CueO, COPPER (II) ION, ...
Authors:Komori, H, Kataoka, K, Sakurai, T, Higuchi, Y.
Deposit date:2011-10-21
Release date:2012-04-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:An O-centered structure of the trinuclear copper center in the Cys500Ser/Glu506Gln mutant of CueO and structural changes in low to high X-ray dose conditions.
Angew.Chem.Int.Ed.Engl., 51, 2012
3UAA
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BU of 3uaa by Molmil
Multicopper Oxidase CueO mutant C500SE506Q (data1)
Descriptor: ACETATE ION, Blue copper oxidase CueO, COPPER (II) ION, ...
Authors:Komori, H, Kataoka, K, Sakurai, T, Higuchi, Y.
Deposit date:2011-10-21
Release date:2012-04-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:An O-centered structure of the trinuclear copper center in the Cys500Ser/Glu506Gln mutant of CueO and structural changes in low to high X-ray dose conditions.
Angew.Chem.Int.Ed.Engl., 51, 2012
3UAE
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BU of 3uae by Molmil
Multicopper Oxidase CueO mutant C500SE506Q (data6)
Descriptor: ACETATE ION, Blue copper oxidase CueO, COPPER (II) ION, ...
Authors:Komori, H, Kataoka, K, Sakurai, T, Higuchi, Y.
Deposit date:2011-10-21
Release date:2012-04-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:An O-centered structure of the trinuclear copper center in the Cys500Ser/Glu506Gln mutant of CueO and structural changes in low to high X-ray dose conditions.
Angew.Chem.Int.Ed.Engl., 51, 2012
3UAB
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BU of 3uab by Molmil
Multicopper Oxidase CueO mutant C500SE506Q (data2)
Descriptor: ACETATE ION, Blue copper oxidase CueO, COPPER (II) ION, ...
Authors:Komori, H, Kataoka, K, Sakurai, T, Higuchi, Y.
Deposit date:2011-10-21
Release date:2012-04-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:An O-centered structure of the trinuclear copper center in the Cys500Ser/Glu506Gln mutant of CueO and structural changes in low to high X-ray dose conditions.
Angew.Chem.Int.Ed.Engl., 51, 2012
3UAD
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BU of 3uad by Molmil
Multicopper Oxidase CueO mutant C500SE506Q (data5)
Descriptor: ACETATE ION, Blue copper oxidase CueO, COPPER (II) ION, ...
Authors:Komori, H, Kataoka, K, Sakurai, T, Higuchi, Y.
Deposit date:2011-10-21
Release date:2012-04-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:An O-centered structure of the trinuclear copper center in the Cys500Ser/Glu506Gln mutant of CueO and structural changes in low to high X-ray dose conditions.
Angew.Chem.Int.Ed.Engl., 51, 2012
3L3F
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BU of 3l3f by Molmil
Crystal structure of a PFU-PUL domain pair of Saccharomyces cerevisiae Doa1/Ufd3
Descriptor: Protein DOA1
Authors:Komori, H, Nishimasu, R, Kuno, T, Higuchi, Y.
Deposit date:2009-12-16
Release date:2010-11-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of a PFU-PUL Domain Pair of Saccharomyces Cerevisiae Doa1/Ufd3
KOBE J.MED.SCI., 56, 2010

 

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