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1WTY
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BU of 1wty by Molmil
Crystal structure of a probable nucleotidyl transferase protein from thermus thermophilus HB8
Descriptor: hypothetical protein TTHA0048
Authors:Kitamura, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-11-29
Release date:2004-12-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of a probable nucleotidyltransferase protein from Thermus Thermophilus HB8
To be Published
2YZM
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BU of 2yzm by Molmil
Structure of D-Alanine:D-Alanine Ligase with substrate from Thermus thermophilus HB8
Descriptor: D-ALANINE, D-alanine--D-alanine ligase
Authors:Kitamura, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-06
Release date:2007-11-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Structure of D-Alanine:D-Alanine Ligase with substrate from Thermus thermophilus HB8
To be Published
2YWA
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BU of 2ywa by Molmil
Crystal structure of uncharacterized conserved protein from Thermus thermophilus HB8
Descriptor: Hypothetical protein TTHA0048
Authors:Kitamura, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-20
Release date:2007-10-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of uncharacterized conserved protein from Thermus thermophilus HB8
To be Published
2YZG
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BU of 2yzg by Molmil
Crystal structure of D-ALA:D-ALA Ligase from Thermus thermophilus HB8
Descriptor: D-alanine--D-alanine ligase
Authors:Kitamura, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-05
Release date:2007-11-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of D-ALA:D-ALA Ligase from Thermus thermophilus HB8
To be Published
2ZDG
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BU of 2zdg by Molmil
Crystal structure of D-Alanine:D-Alanine Ligase with ADP from Thermus thermophius HB8
Descriptor: ADENOSINE-5'-DIPHOSPHATE, D-alanine--D-alanine ligase, MAGNESIUM ION
Authors:Kitamura, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-11-22
Release date:2008-05-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of D-Alanine:D-Alanine Ligase with ADP from Thermus thermophius HB8
To be Published
2PCQ
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BU of 2pcq by Molmil
Crystal structure of putative dihydrodipicolinate synthase (TTHA0737) from Thermus Thermophilus HB8
Descriptor: GLYCEROL, POTASSIUM ION, Putative dihydrodipicolinate synthase
Authors:Jeyakanthan, J, Kanaujia, S.P, Vasuki Ranjani, C, Sekar, K, Kitamura, Y, Ebihara, A, Kuramitsu, S, Shinkai, A, Shiro, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-30
Release date:2007-10-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of putative dihydrodipicolinate synthase (TTHA0737) from Thermus Thermophilus HB8
To be Published
3MGT
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BU of 3mgt by Molmil
Crystal structure of a H5-specific CTL epitope variant derived from H5N1 influenza virus in complex with HLA-A*0201
Descriptor: 10-meric peptide from Hemagglutinin, Beta-2-microglobulin, HLA class I histocompatibility antigen, ...
Authors:Sun, Y, Liu, J, Yang, M, Gao, F, Zhou, J, Kitamura, Y.
Deposit date:2010-04-07
Release date:2010-05-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.197 Å)
Cite:Identification and structural definition of H5-specific CTL epitopes restricted by HLA-A*0201 derived from the H5N1 subtype of influenza A viruses
J.Gen.Virol., 91, 2010
3MGO
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BU of 3mgo by Molmil
Crystal structure of a H5-specific CTL epitope derived from H5N1 influenza virus in complex with HLA-A*0201
Descriptor: 10-meric peptide from Hemagglutinin, Beta-2-microglobulin, HLA class I histocompatibility antigen, ...
Authors:Sun, Y, Liu, J, Yang, M, Gao, F, Zhou, J, Kitamura, Y.
Deposit date:2010-04-07
Release date:2010-05-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.297 Å)
Cite:Identification and structural definition of H5-specific CTL epitopes restricted by HLA-A*0201 derived from the H5N1 subtype of influenza A viruses
J.Gen.Virol., 91, 2010
2ZXR
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BU of 2zxr by Molmil
Crystal structure of RecJ in complex with Mg2+ from Thermus thermophilus HB8
Descriptor: MAGNESIUM ION, Single-stranded DNA specific exonuclease RecJ
Authors:Wakamatsu, T, Kitamura, Y, Nakagawa, N, Masui, R, Kuramitsu, S.
Deposit date:2009-01-05
Release date:2010-01-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structure of RecJ exonuclease defines its specificity for single-stranded DNA
J.Biol.Chem., 285, 2010
2ZBW
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BU of 2zbw by Molmil
Crystal structure of thioredoxin reductase-like protein from Thermus thermophilus HB8
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Thioredoxin reductase
Authors:Ebihara, A, Manzoku, M, Fujimoto, Y, Kitamura, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-10-30
Release date:2007-11-13
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of thioredoxin reductase-like protein from Thermus thermophilus HB8
To be Published
2ZQE
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BU of 2zqe by Molmil
Crystal structure of the Smr domain of Thermus thermophilus MutS2
Descriptor: MutS2 protein
Authors:Fukui, K, Kitamura, Y, Nakagawa, N, Masui, R, Kuramitsu, S.
Deposit date:2008-08-08
Release date:2008-09-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of MutS2 endonuclease domain and the mechanism of homologous recombination suppression
J.Biol.Chem., 283, 2008
2ZXO
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BU of 2zxo by Molmil
Crystal structure of RecJ from Thermus thermophilus HB8
Descriptor: Single-stranded DNA specific exonuclease RecJ
Authors:Wakamatsu, T, Kitamura, Y, Nakagawa, N, Masui, R, Kuramitsu, S.
Deposit date:2009-01-05
Release date:2010-01-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of RecJ exonuclease defines its specificity for single-stranded DNA
J.Biol.Chem., 285, 2010
2ZXP
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BU of 2zxp by Molmil
Crystal structure of RecJ in complex with Mn2+ from Thermus thermophilus HB8
Descriptor: MANGANESE (II) ION, Single-stranded DNA specific exonuclease RecJ
Authors:Wakamatsu, T, Kitamura, Y, Nakagawa, N, Masui, R, Kuramitsu, S.
Deposit date:2009-01-05
Release date:2010-01-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of RecJ exonuclease defines its specificity for single-stranded DNA
J.Biol.Chem., 285, 2010
3CQ2
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BU of 3cq2 by Molmil
Structure of the DTDP-4-Keto-L-Rhamnose Reductase related protein (other form) from Thermus Thermophilus HB8
Descriptor: Putative uncharacterized protein TTHB138
Authors:Jeyakanthan, J, Kanaujia, S.P, Sekar, K, Satoh, S, Kitamura, Y, Ebihara, A, Chen, L, Liu, Z.J, Wang, B.C, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2008-04-02
Release date:2009-04-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of the DTDP-4-Keto-L-Rhamnose Reductase related protein from Thermus Thermophilus HB8
To be Published
3CQ3
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BU of 3cq3 by Molmil
Structure of the DTDP-4-Keto-L-Rhamnose Reductase related protein (other form) from Thermus Thermophilus HB8
Descriptor: GLYCEROL, HEXAETHYLENE GLYCOL, MAGNESIUM ION, ...
Authors:Jeyakanthan, J, Kanaujia, S.P, Sekar, K, Satoh, S, Kitamura, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2008-04-02
Release date:2009-04-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of the DTDP-4-Keto-L-Rhamnose Reductase related protein (other form) from Thermus Thermophilus HB8
To be Published
3CQ1
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BU of 3cq1 by Molmil
Structure of the DTDP-4-Keto-L-Rhamnose Reductase related protein (TT1362) from Thermus Thermophilus HB8
Descriptor: Putative uncharacterized protein TTHB138
Authors:Jeyakanthan, J, Satoh, S, Kitamura, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2008-04-02
Release date:2009-04-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of the DTDP-4-Keto-L-Rhamnose Reductase related protein (TT1362) from Thermus Thermophilus HB8
To be Published
2Z0G
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BU of 2z0g by Molmil
The crystal structure of PII protein
Descriptor: CHLORIDE ION, Nitrogen regulatory protein P-II, PHOSPHATE ION
Authors:Sakai, H, Shinkai, A, Kitamura, Y, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-07
Release date:2008-05-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The crystal structure of PII protein
To be Published
2EG1
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BU of 2eg1 by Molmil
The crystal structure of PII protein
Descriptor: CHLORIDE ION, Nitrogen regulatory protein P-II, SULFATE ION
Authors:Sakai, H, Shinkai, A, Kitamura, Y, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-27
Release date:2008-03-04
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The crystal structure of PII protein
To be Published
2EG4
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BU of 2eg4 by Molmil
Crystal Structure of Probable Thiosulfate Sulfurtransferase
Descriptor: Probable thiosulfate sulfurtransferase, SULFATE ION, ZINC ION
Authors:Sakai, H, Ebihara, A, Kitamura, Y, Shinkai, A, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-27
Release date:2008-03-04
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of Probable Thiosulfate Sulfurtransferase
To be Published
2EG3
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BU of 2eg3 by Molmil
Crystal Structure of Probable Thiosulfate Sulfurtransferase
Descriptor: Probable thiosulfate sulfurtransferase, SULFATE ION, ZINC ION
Authors:Sakai, H, Ebihara, A, Kitamura, Y, Shinkai, A, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-27
Release date:2008-03-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of Probable Thiosulfate Sulfurtransferase
To be Published
2EG2
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BU of 2eg2 by Molmil
The crystal structure of PII protein
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, Nitrogen regulatory protein P-II
Authors:Sakai, H, Shinkai, A, Kitamura, Y, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-27
Release date:2008-03-04
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:The crystal structure of PII protein
To be Published
1K2G
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BU of 1k2g by Molmil
Structural basis for the 3'-terminal guanosine recognition by the group I intron
Descriptor: 5'-R(*CP*AP*GP*AP*CP*UP*UP*CP*GP*GP*UP*CP*GP*CP*AP*GP*AP*GP*AP*UP*GP*G)-3'
Authors:Kitamura, Y, Muto, Y, Watanabe, S, Kim, I, Ito, T, Nishiya, Y, Sakamoto, K, Ohtsuki, T, Kawai, G, Watanabe, K, Hosono, K, Takaku, H, Katoh, E, Yamazaki, T, Inoue, T, Yokoyama, S.
Deposit date:2001-09-27
Release date:2002-05-08
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Solution structure of an RNA fragment with the P7/P9.0 region and the 3'-terminal guanosine of the tetrahymena group I intron.
RNA, 8, 2002
2YZN
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BU of 2yzn by Molmil
Crystal structure of D-alanine:D-Alanine Ligase with AMPPNP from Thermus thermophilus HB8.
Descriptor: D-alanine-D-alanine ligase, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Kitamuta, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-06
Release date:2007-11-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of D-alanine:D-Alanine Ligase with AMPPNP from Thermus thermophilus HB8
To be Published
2YVW
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BU of 2yvw by Molmil
Crystal structure of UDP-N-acetylglucosamine 1-carboxyvinyltransferase from Aquifex aeolicus VF5
Descriptor: PHOSPHATE ION, UDP-N-acetylglucosamine 1-carboxyvinyltransferase, URIDINE-DIPHOSPHATE-2(N-ACETYLGLUCOSAMINYL) BUTYRIC ACID
Authors:Kitamuta, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-16
Release date:2007-10-16
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Crystal structure of UDP-N-acetylglucosamine 1-carboxyvinyltransferase from Aquifex aeolicus VF5
To be Published
2ZDH
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BU of 2zdh by Molmil
Crystal structure of D-Alanine:D-Alanine Ligase with ADP and D-Alanine from Thermus thermophius HB8
Descriptor: ADENOSINE-5'-DIPHOSPHATE, D-ALANINE, D-alanine--D-alanine ligase, ...
Authors:Kitamuta, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-11-22
Release date:2008-05-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of D-Alanine:D-Alanine Ligase with ADP and D-Alanine from Thermus thermophius HB8
To be Published

 

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