Author results

1MPY
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STRUCTURE OF CATECHOL 2,3-DIOXYGENASE (METAPYROCATECHASE) FROM PSEUDOMONAS PUTIDA MT-2
Descriptor:CATECHOL 2,3-DIOXYGENASE, FE (II) ION, ACETONE
Authors:Kita, A., Kita, S., Fujisawa, I., Inaka, K., Ishida, T., Horiike, K., Nozaki, M., Miki, K.
Deposit date:1998-10-20
Release date:1999-05-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:An archetypical extradiol-cleaving catecholic dioxygenase: the crystal structure of catechol 2,3-dioxygenase (metapyrocatechase) from Ppseudomonas putida mt-2.
Structure Fold.Des., 7, 1999
1FVP
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FLAVOPROTEIN 390
Descriptor:FLAVOPROTEIN 390, 6-(3-TETRADECANOIC ACID) FLAVINE MONONUCLEOTIDE
Authors:Kita, A., Miki, K.
Deposit date:1995-07-07
Release date:1995-10-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of flavoprotein FP390 from a luminescent bacterium Photobacterium phosphoreum refined at 2.7 A resolution.
Acta Crystallogr.,Sect.D, 52, 1996
1IT6
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CRYSTAL STRUCTURE OF THE COMPLEX BETWEEN CALYCULIN A AND THE CATALYTIC SUBUNIT OF PROTEIN PHOSPHATASE 1
Descriptor:SERINE/THREONINE PROTEIN PHOSPHATASE 1 GAMMA (PP1-GAMMA) CATALYTIC SUBUNIT, MANGANESE (II) ION, CALYCULIN A
Authors:Kita, A., Matsunaga, S., Takai, A., Kataiwa, H., Wakimoto, T., Fusetani, N., Isobe, M., Miki, K.
Deposit date:2002-01-09
Release date:2002-05-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the complex between calyculin A and the catalytic subunit of protein phosphatase 1.
Structure, 10, 2002
1X0P
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STRUCTURE OF A CYANOBACTERIAL BLUF PROTEIN, TLL0078
Descriptor:hypothetical protein Tll0078, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Kita, A., Okajima, K., Morimoto, Y., Ikeuchi, M., Miki, K.
Deposit date:2005-03-27
Release date:2005-06-07
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of a Cyanobacterial BLUF Protein, Tll0078, Containing a Novel FAD-binding Blue Light Sensor Domain
J.Mol.Biol., 349, 2005
2ZSK
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CRYSTAL STRUCTURE OF PH1733, AN ASPARTATE RACEMASE HOMOLOGUE, FROM PYROCOCCUS HORIKOSHII OT3
Descriptor:226aa long hypothetical aspartate racemase
Authors:Kita, A., Tasaki, S., Yohda, M., Miki, K.
Deposit date:2008-09-12
Release date:2008-10-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal structure of PH1733, an aspartate racemase homologue, from pyrococcus horikoshii OT3
Proteins, 74, 2009
3WMP
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CRYSTAL STRUCTURE OF SLL-2
Descriptor:Galactose-binding lectin, N-ACETYL-D-GLUCOSAMINE, (4S)-2-METHYL-2,4-PENTANEDIOL, ...
Authors:Kita, A., Jimbo, M., Sakai, R., Morimoto, Y., Miki, K.
Deposit date:2013-11-22
Release date:2015-01-14
Last modified:2015-09-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a symbiosis-related lectin from octocoral.
Glycobiology, 25, 2015
3WMQ
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CRYSTAL STRUCTURE OF THE COMPLEX BETWEEN SLL-2 AND GALNAC.
Descriptor:Galactose-binding lectin, N-ACETYL-D-GLUCOSAMINE, N-ACETYL-2-DEOXY-2-AMINO-GALACTOSE, ...
Authors:Kita, A., Jimbo, M., Sakai, R., Morimoto, Y., Miki, K.
Deposit date:2013-11-22
Release date:2015-01-14
Last modified:2015-09-23
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of a symbiosis-related lectin from octocoral.
Glycobiology, 25, 2015
5B05
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LYSOZYME (CONTROL EXPERIMENT)
Descriptor:Lysozyme C, 1,2-ETHANEDIOL, SODIUM ION, ...
Authors:Kita, A., Morimoto, Y.
Deposit date:2015-10-28
Release date:2016-01-13
Last modified:2016-02-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:An Effective Deuterium Exchange Method for Neutron Crystal Structure Analysis with Unfolding-Refolding Processes
Mol Biotechnol., 58, 2016
5B06
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LYSOZYME (DENATURED BY NAOD AND REFOLDED)
Descriptor:Lysozyme C, 1,2-ETHANEDIOL, SODIUM ION, ...
Authors:Kita, A., Morimoto, Y.
Deposit date:2015-10-28
Release date:2016-01-13
Last modified:2016-02-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:An Effective Deuterium Exchange Method for Neutron Crystal Structure Analysis with Unfolding-Refolding Processes
Mol Biotechnol., 58, 2016
5B07
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LYSOZYME (DENATURED BY DCL AND REFOLDED)
Descriptor:Lysozyme C, 1,2-ETHANEDIOL, SODIUM ION, ...
Authors:Kita, A., Morimoto, Y.
Deposit date:2015-10-28
Release date:2016-01-13
Last modified:2016-02-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:An Effective Deuterium Exchange Method for Neutron Crystal Structure Analysis with Unfolding-Refolding Processes
Mol Biotechnol., 58, 2016
5X4A
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SLL-2-FORSSMAN ANTIGEN TETRASACCHARIDES COMPLEX
Descriptor:Galactose-binding lectin, N-ACETYL-D-GLUCOSAMINE, N-ACETYL-2-DEOXY-2-AMINO-GALACTOSE, ...
Authors:Kita, A., Miki, K.
Deposit date:2017-02-11
Release date:2017-09-20
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Crystal structure of octocoral lectin SLL-2 complexed with Forssman antigen tetrasaccharide.
Glycobiology, 2017
3AJX
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CRYSTAL STRUCTURE OF 3-HEXULOSE-6-PHOSPHATE SYNTHASE
Descriptor:3-hexulose-6-phosphate synthase, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Kita, A., Orita, I., Yurimoto, H., Kato, N., Sakai, Y., Miki, K.
Deposit date:2010-06-24
Release date:2010-11-03
Last modified:2014-01-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of 3-hexulose-6-phosphate synthase, a member of the orotidine 5'-monophosphate decarboxylase suprafamily
Proteins, 78, 2010
1QGI
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CHITOSANASE FROM BACILLUS CIRCULANS
Descriptor:PROTEIN (CHITOSANASE), D-GLUCOSAMINE, N-ACETYL-D-GLUCOSAMINE, ...
Authors:Saito, J., Kita, A., Higuchi, Y., Nagata, Y., Ando, A., Miki, K.
Deposit date:1999-04-28
Release date:1999-10-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of chitosanase from Bacillus circulans MH-K1 at 1.6-A resolution and its substrate recognition mechanism.
J.Biol.Chem., 274, 1999
1WMD
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CRYSTAL STRUCTURE OF ALKALINE SERINE PROTEASE KP-43 FROM BACILLUS SP. KSM-KP43 (1.30 ANGSTROM, 100 K)
Descriptor:protease, CALCIUM ION, SULFATE ION, ...
Authors:Nonaka, T., Fujihashi, M., Kita, A., Saeki, K., Ito, S., Horikoshi, K., Miki, K.
Deposit date:2004-07-08
Release date:2004-09-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:The Crystal Structure of an Oxidatively Stable Subtilisin-like Alkaline Serine Protease, KP-43, with a C-terminal {beta}-Barrel Domain
J.Biol.Chem., 279, 2004
1WME
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CRYSTAL STRUCTURE OF ALKALINE SERINE PROTEASE KP-43 FROM BACILLUS SP. KSM-KP43 (1.50 ANGSTROM, 293 K)
Descriptor:protease, CALCIUM ION
Authors:Nonaka, T., Fujihashi, M., Kita, A., Saeki, K., Ito, S., Horikoshi, K., Miki, K.
Deposit date:2004-07-08
Release date:2004-09-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The Crystal Structure of an Oxidatively Stable Subtilisin-like Alkaline Serine Protease, KP-43, with a C-terminal {beta}-Barrel Domain
J.Biol.Chem., 279, 2004
1WMF
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CRYSTAL STRUCTURE OF ALKALINE SERINE PROTEASE KP-43 FROM BACILLUS SP. KSM-KP43 (OXIDIZED FORM, 1.73 ANGSTROM)
Descriptor:protease, CALCIUM ION, 1,4-DIETHYLENE DIOXIDE, ...
Authors:Nonaka, T., Fujihashi, M., Kita, A., Saeki, K., Ito, S., Horikoshi, K., Miki, K.
Deposit date:2004-07-08
Release date:2004-09-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:The Crystal Structure of an Oxidatively Stable Subtilisin-like Alkaline Serine Protease, KP-43, with a C-terminal {beta}-Barrel Domain
J.Biol.Chem., 279, 2004
2D2M
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STRUCTURE OF AN EXTRACELLULAR GIANT HEMOGLOBIN OF THE GUTLESS BEARD WORM OLIGOBRACHIA MASHIKOI
Descriptor:Giant hemoglobin, A1(b) globin chain, A2(a5) globin chain, ...
Authors:Numoto, N., Nakagawa, T., Kita, A., Sasayama, Y., Fukumori, Y., Miki, K.
Deposit date:2005-09-12
Release date:2005-10-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structure of an extracellular giant hemoglobin of the gutless beard worm Oligobrachia mashikoi.
Proc.Natl.Acad.Sci.USA, 102, 2005
2D2N
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STRUCTURE OF AN EXTRACELLULAR GIANT HEMOGLOBIN OF THE GUTLESS BEARD WORM OLIGOBRACHIA MASHIKOI
Descriptor:Giant hemoglobin, A1(b) globin chain, A2(a5) globin chain, ...
Authors:Numoto, N., Nakagawa, T., Kita, A., Sasayama, Y., Fukumori, Y., Miki, K.
Deposit date:2005-09-12
Release date:2005-10-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structure of an extracellular giant hemoglobin of the gutless beard worm Oligobrachia mashikoi.
Proc.Natl.Acad.Sci.USA, 102, 2005
2DT5
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CRYSTAL STRUCTURE OF TTHA1657 (AT-RICH DNA-BINDING PROTEIN) FROM THERMUS THERMOPHILUS HB8
Descriptor:AT-rich DNA-binding protein, SULFATE ION, CHLORIDE ION, ...
Authors:Nakamura, A., Sosa, A., Komori, H., Kita, A., Miki, K., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-07-11
Release date:2007-01-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Crystal structure of TTHA1657 (AT-rich DNA-binding protein; p25) from Thermus thermophilus HB8 at 2.16 A resolution
Proteins, 66, 2007
3WDK
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CRYSTAL STRUCTURE OF 4-PHOSPHOPANTOATE-BETA-ALANINE LIGASE COMPLEXED WITH REACTION INTERMEDIATE
Descriptor:4-phosphopantoate--beta-alanine ligase, 5'-O-[(S)-hydroxy{[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]oxy}phosphoryl]adenosine, CITRATE ANION
Authors:Kishimoto, A., Kita, A., Ishibashi, T., Tomita, H., Yokooji, Y., Imanaka, T., Atomi, H., Miki, K.
Deposit date:2013-06-19
Release date:2014-04-02
Last modified:2017-02-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of phosphopantothenate synthetase from Thermococcus kodakarensis
Proteins, 82, 2014
3WDL
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CRYSTAL STRUCTURE OF 4-PHOSPHOPANTOATE-BETA-ALANINE LIGASE COMPLEXED WITH ATP
Descriptor:4-phosphopantoate--beta-alanine ligase, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION
Authors:Kishimoto, A., Kita, A., Ishibashi, T., Tomita, H., Yokooji, Y., Imanaka, T., Atomi, H., Miki, K.
Deposit date:2013-06-19
Release date:2014-04-02
Last modified:2017-02-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of phosphopantothenate synthetase from Thermococcus kodakarensis
Proteins, 82, 2014
3WDM
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CRYSTAL STRUCTURE OF 4-PHOSPHOPANTOATE-BETA-ALANINE LIGASE FROM THERMOCOCCUS KODAKARENSIS
Descriptor:4-phosphopantoate--beta-alanine ligase, ADENOSINE
Authors:Kishimoto, A., Kita, A., Ishibashi, T., Tomita, H., Yokooji, Y., Imanaka, T., Atomi, H., Miki, K.
Deposit date:2013-06-19
Release date:2014-04-02
Last modified:2017-02-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of phosphopantothenate synthetase from Thermococcus kodakarensis
Proteins, 82, 2014
1JFL
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CRYSTAL STRUCTURE DETERMINATION OF ASPARTATE RACEMASE FROM AN ARCHAEA
Descriptor:ASPARTATE RACEMASE
Authors:Liu, L.J., Iwata, K., Kita, A., Kawarabayasi, Y., Yohda, M., Miki, K.
Deposit date:2001-06-21
Release date:2002-06-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of aspartate racemase from Pyrococcus horikoshii OT3 and its implications for molecular mechanism of PLP-independent racemization.
J.Mol.Biol., 319, 2002
1UD2
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CRYSTAL STRUCTURE OF CALCIUM-FREE ALPHA-AMYLASE FROM BACILLUS SP. STRAIN KSM-K38 (AMYK38)
Descriptor:amylase, SODIUM ION, GLYCEROL
Authors:Nonaka, T., Fujihashi, M., Kita, A., Hagihara, H., Ozaki, K., Ito, S., Miki, K.
Deposit date:2003-04-28
Release date:2003-07-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Crystal structure of calcium-free alpha-amylase from Bacillus sp. strain KSM-K38 (AmyK38) and its sodium ion binding sites
J.Biol.Chem., 278, 2003
1UD3
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CRYSTAL STRUCTURE OF AMYK38 N289H MUTANT
Descriptor:amylase, SODIUM ION
Authors:Nonaka, T., Fujihashi, M., Kita, A., Hagihara, H., Ozaki, K., Ito, S., Miki, K.
Deposit date:2003-04-28
Release date:2003-07-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of calcium-free alpha-amylase from Bacillus sp. strain KSM-K38 (AmyK38) and its sodium ion binding sites
J.Biol.Chem., 278, 2003
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