Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4L7M
DownloadVisualize
BU of 4l7m by Molmil
Crystal structure of the archaeal HEAT-like repeats protein TON_1937 from Thermococcus onnurineus NA1
Descriptor: GLYCEROL, Putative uncharacterized protein
Authors:Kim, Y.G, Jeong, J.H.
Deposit date:2013-06-14
Release date:2013-07-10
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:Crystal structure of the archaeal HEAT-like repeats protein TON_1937 from Thermococcus onnurineus NA1
To be Published
2XMO
DownloadVisualize
BU of 2xmo by Molmil
The crystal structure of Lmo2642
Descriptor: CALCIUM ION, FE (III) ION, LMO2642 PROTEIN, ...
Authors:Jeong, J.H, Kim, Y.G.
Deposit date:2010-07-28
Release date:2011-02-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and Functional Analysis of the Lmo2642 Cyclic Nucleotide Phosphodiesterase from Listeria Monocytogenes.
Proteins, 79, 2011
7CM4
DownloadVisualize
BU of 7cm4 by Molmil
Crystal Structure of COVID-19 virus spike receptor-binding domain complexed with a neutralizing antibody CT-P59
Descriptor: 1,2-ETHANEDIOL, IgG heavy chain, IgG light chain, ...
Authors:Kim, Y.G, Jeong, J.H, Bae, J.S, Lee, J.
Deposit date:2020-07-24
Release date:2021-01-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:A therapeutic neutralizing antibody targeting receptor binding domain of SARS-CoV-2 spike protein.
Nat Commun, 12, 2021
4UZ0
DownloadVisualize
BU of 4uz0 by Molmil
Crystal Structure of apoptosis repressor with CARD (ARC)
Descriptor: GLYCEROL, NUCLEOLAR PROTEIN 3
Authors:Kim, S.H, Jeong, J.H, Jang, T.H, Kim, Y.G, Park, H.H.
Deposit date:2014-09-04
Release date:2015-07-01
Last modified:2017-07-12
Method:X-RAY DIFFRACTION (2.399 Å)
Cite:Crystal Structure of Caspase Recruiting Domain (Card) of Apoptosis Repressor with Card (Arc) and its Implication in Inhibition of Apoptosis.
Sci.Rep., 5, 2015
4UY5
DownloadVisualize
BU of 4uy5 by Molmil
Crystal structure of Histidine-specific methyltransferase EgtD from Mycobacterium smegmatis
Descriptor: ACETATE ION, HISTIDINE-SPECIFIC METHYLTRANSFERASE EGTD, IMIDAZOLE
Authors:Jeong, J.H, Kim, Y.G.
Deposit date:2014-08-29
Release date:2014-10-08
Last modified:2017-07-12
Method:X-RAY DIFFRACTION (1.997 Å)
Cite:Structural Insights Into the Histidine Trimethylation Activity of Egtd from Mycobacterium Smegmatis.
Biochem.Biophys.Res.Commun., 452, 2014
4UY6
DownloadVisualize
BU of 4uy6 by Molmil
Crystal structure of Histidine and SAH bound Histidine-specific methyltransferase EgtD from Mycobacterium smegmatis
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, HISTIDINE, HISTIDINE-SPECIFIC METHYLTRANSFERASE EGTD, ...
Authors:Jeong, J.H, Kim, Y.G.
Deposit date:2014-08-29
Release date:2014-10-08
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Structural Insights Into the Histidine Trimethylation Activity of Egtd from Mycobacterium Smegmatis.
Biochem.Biophys.Res.Commun., 452, 2014
4UY7
DownloadVisualize
BU of 4uy7 by Molmil
Crystal structure of Histidine bound Histidine-specific methyltransferase EgtD from Mycobacterium smegmatis
Descriptor: HISTIDINE, HISTIDINE-SPECIFIC METHYLTRANSFERASE EGTD
Authors:Jeong, J.H, Kim, Y.G.
Deposit date:2014-08-29
Release date:2014-10-08
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.306 Å)
Cite:Structural Insights Into the Histidine Trimethylation Activity of Egtd from Mycobacterium Smegmatis.
Biochem.Biophys.Res.Commun., 452, 2014
4V3I
DownloadVisualize
BU of 4v3i by Molmil
Crystal Structure of TssL from Vibrio cholerae.
Descriptor: GLYCEROL, VCA0115
Authors:Jeong, J.H, Kim, Y.G.
Deposit date:2014-10-19
Release date:2014-12-17
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.499 Å)
Cite:Crystal structure of the bacterial type VI secretion system component TssL from Vibrio cholerae.
J. Microbiol., 53, 2015
4ARZ
DownloadVisualize
BU of 4arz by Molmil
The crystal structure of Gtr1p-Gtr2p complexed with GTP-GDP
Descriptor: GTP-BINDING PROTEIN GTR1, GTP-BINDING PROTEIN GTR2, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Jeong, J.H, Kim, Y.G.
Deposit date:2012-04-27
Release date:2012-07-25
Last modified:2012-09-05
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal Structure of the Gtr1Pgtp-Gtr2Pgdp Complex Reveals Large Structural Rearrangements Triggered by GTP-to-Gdp Conversion
J.Biol.Chem., 287, 2012
3CRC
DownloadVisualize
BU of 3crc by Molmil
Crystal Structure of Escherichia coli MazG, the Regulator of Nutritional Stress Response
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Protein mazG
Authors:Lee, S, Kim, M.H, Kang, B.S, Kim, J.S, Kim, Y.G, Kim, K.J.
Deposit date:2008-04-05
Release date:2008-04-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of Escherichia coli MazG, the regulator of nutritional stress response.
J.Biol.Chem., 283, 2008
3CRA
DownloadVisualize
BU of 3cra by Molmil
Crystal Structure of Escherichia coli MazG, the Regulator of Nutritional Stress Response
Descriptor: Protein mazG
Authors:Lee, S, Kim, M.H, Kang, B.S, Kim, J.S, Kim, Y.G, Kim, K.J.
Deposit date:2008-04-05
Release date:2008-04-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of Escherichia coli MazG, the regulator of nutritional stress response.
J.Biol.Chem., 283, 2008
4D2K
DownloadVisualize
BU of 4d2k by Molmil
Crystal structure of DREP2 CIDE domain
Descriptor: DREP2
Authors:Jang, T.H, Park, H.H, Kim, Y.G, Jeong, J.H.
Deposit date:2014-05-12
Release date:2015-05-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.302 Å)
Cite:CIDE domains form functionally important higher-order assemblies for DNA fragmentation.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
1SFU
DownloadVisualize
BU of 1sfu by Molmil
Crystal structure of the viral Zalpha domain bound to left-handed Z-DNA
Descriptor: 34L protein, 5'-D(*T*CP*GP*CP*GP*CP*G)-3'
Authors:Ha, S.C, Van Quyen, D, Wu, C.A, Lowenhaupt, K, Rich, A, Kim, Y.G, Kim, K.K.
Deposit date:2004-02-20
Release date:2004-08-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:A poxvirus protein forms a complex with left-handed Z-DNA: crystal structure of a Yatapoxvirus Zalpha bound to DNA.
Proc.Natl.Acad.Sci.USA, 101, 2004
5X90
DownloadVisualize
BU of 5x90 by Molmil
Structure of DotL(656-783)-IcmS-IcmW-LvgA derived from Legionella pneumophila
Descriptor: Hypothetical virulence protein, IcmO (DotL), IcmS, ...
Authors:Kim, H, Kwak, M.J, Kim, J.D, Kim, Y.G, Oh, B.H.
Deposit date:2017-03-04
Release date:2017-06-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Architecture of the type IV coupling protein complex of Legionella pneumophila
Nat Microbiol, 2, 2017
5X1U
DownloadVisualize
BU of 5x1u by Molmil
Structure of the cytosolic domain of DotM derived from Legionella pneumophila
Descriptor: Uncharacterized protein
Authors:Kwak, M.J, Kim, Y.G, Oh, B.H.
Deposit date:2017-01-26
Release date:2017-06-14
Last modified:2018-06-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Architecture of the type IV coupling protein complex of Legionella pneumophila
Nat Microbiol, 2, 2017
4K1V
DownloadVisualize
BU of 4k1v by Molmil
Crystal structure of delta5-3-ketosteroid isomerase containing Y16F and Y57F mutations
Descriptor: Steroid Delta-isomerase
Authors:Cha, H.J, Jang, D.S, Kim, Y.G, Hong, B.H, Woo, J.S, Choi, K.Y.
Deposit date:2013-04-05
Release date:2013-07-31
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Rescue of deleterious mutations by the compensatory Y30F mutation in ketosteroid isomerase
Mol.Cells, 36, 2013
4K1U
DownloadVisualize
BU of 4k1u by Molmil
Crystal structure of delta5-3-ketosteroid isomerase containing Y16F and Y32F mutations
Descriptor: Steroid Delta-isomerase
Authors:Cha, H.J, Jang, D.S, Kim, Y.G, Hong, B.H, Woo, J.S, Choi, K.Y.
Deposit date:2013-04-05
Release date:2013-07-31
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Rescue of deleterious mutations by the compensatory Y30F mutation in ketosteroid isomerase
Mol.Cells, 36, 2013
3ZG9
DownloadVisualize
BU of 3zg9 by Molmil
Crystal Structure of Penicillin-Binding Protein 4 from Listeria monocytogenes in the Cefuroxime bound form
Descriptor: (2R)-5-[(carbamoyloxy)methyl]-2-[(1R)-1-{[(2Z)-2-(furan-2-yl)-2-(methoxyimino)acetyl]amino}-2-oxoethyl]-3,6-dihydro-2H-1,3-thiazine-4-carboxylic acid, GLYCEROL, PENICILLIN-BINDING PROTEIN 4
Authors:Jeong, J.H, Kim, Y.G.
Deposit date:2012-12-17
Release date:2014-01-15
Method:X-RAY DIFFRACTION (1.804 Å)
Cite:Crystal Structures of Penicillin-Binding Protein 4 from Listeria Monocytogenes
To be Published
5ZQB
DownloadVisualize
BU of 5zqb by Molmil
Crystal Structure of Penicillin-Binding Protein D2 from Listeria monocytogenes in the Penicillin G bound form
Descriptor: GLYCEROL, Lmo2812 protein, OPEN FORM - PENICILLIN G
Authors:Jeong, J.H, Kim, Y.G.
Deposit date:2018-04-18
Release date:2018-07-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.896 Å)
Cite:Crystal Structures of Penicillin-Binding Protein D2 from Listeria monocytogenes and Structural Basis for Antibiotic Specificity
Antimicrob. Agents Chemother., 62, 2018
5ZQD
DownloadVisualize
BU of 5zqd by Molmil
Crystal Structure of Penicillin-Binding Protein D2 from Listeria monocytogenes in the Cefotaxime bound form
Descriptor: CEFOTAXIME, C3' cleaved, open, ...
Authors:Jeong, J.H, Kim, Y.G.
Deposit date:2018-04-18
Release date:2018-07-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.888 Å)
Cite:Crystal Structures of Penicillin-Binding Protein D2 from Listeria monocytogenes and Structural Basis for Antibiotic Specificity
Antimicrob. Agents Chemother., 62, 2018
5ZQA
DownloadVisualize
BU of 5zqa by Molmil
Crystal Structure of Penicillin-Binding Protein D2 from Listeria monocytogenes in the apo form
Descriptor: DI(HYDROXYETHYL)ETHER, Lmo2812 protein, MAGNESIUM ION
Authors:Jeong, J.H, Kim, Y.G.
Deposit date:2018-04-18
Release date:2018-07-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal Structures of Penicillin-Binding Protein D2 from Listeria monocytogenes and Structural Basis for Antibiotic Specificity
Antimicrob. Agents Chemother., 62, 2018
5ZQC
DownloadVisualize
BU of 5zqc by Molmil
Crystal Structure of Penicillin-Binding Protein D2 from Listeria monocytogenes in the Ampicillin bound form
Descriptor: (2R,4S)-2-[(1R)-1-{[(2R)-2-amino-2-phenylacetyl]amino}-2-oxoethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid, GLYCEROL, Lmo2812 protein
Authors:Jeong, J.H, Kim, Y.G.
Deposit date:2018-04-18
Release date:2018-08-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.702 Å)
Cite:Crystal Structures of Penicillin-Binding Protein D2 from Listeria monocytogenes and Structural Basis for Antibiotic Specificity
Antimicrob. Agents Chemother., 62, 2018
5ZQE
DownloadVisualize
BU of 5zqe by Molmil
Crystal Structure of Penicillin-Binding Protein D2 from Listeria monocytogenes in the Cefuroxime bound form
Descriptor: 2-[CARBOXY-(2-FURAN-2-YL-2-METHOXYIMINO-ACETYLAMINO)-METHYL]-5-METHYL-3,6-DIHYDRO-2H-[1,3]THIAZINE-4-CARBOXYLIC ACID, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Jeong, J.H, Kim, Y.G.
Deposit date:2018-04-18
Release date:2018-07-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.996 Å)
Cite:Crystal Structures of Penicillin-Binding Protein D2 from Listeria monocytogenes and Structural Basis for Antibiotic Specificity
Antimicrob. Agents Chemother., 62, 2018
7C3K
DownloadVisualize
BU of 7c3k by Molmil
Crystal Structure of mIRGB10
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Immunity-related GTPase family member b10
Authors:Ha, H.J, Jeong, J.H, Kim, Y.G, Park, H.H.
Deposit date:2020-05-12
Release date:2021-04-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Molecular basis of IRGB10 oligomerization and membrane association for pathogen membrane disruption.
Commun Biol, 4, 2021
4UV7
DownloadVisualize
BU of 4uv7 by Molmil
The complex structure of extracellular domain of EGFR and GC1118A
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, EPIDERMAL GROWTH FACTOR RECEPTOR, ...
Authors:Yoo, J.H, Cho, H.S.
Deposit date:2014-08-05
Release date:2015-10-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Gc1118, an Anti-Egfr Antibody with a Distinct Binding Epitope and Superior Inhibitory Activity Against High-Affinity Egfr Ligands.
Mol.Cancer Ther., 15, 2016

 

123>

218500

PDB entries from 2024-04-17

PDB statisticsPDBj update infoContact PDBjnumon