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1WF3
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BU of 1wf3 by Molmil
Crystal structure of GTP-binding protein TT1341 from Thermus thermophilus HB8
Descriptor: GLYCEROL, GTP-binding protein, MAGNESIUM ION, ...
Authors:Kawazoe, M, Hori-Takemoto, C, Kaminishi, T, Sekine, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-25
Release date:2004-11-25
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Crystal structure of GTP-binding protein TT1341 from Thermus thermophilus HB8
To be Published
2YWH
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BU of 2ywh by Molmil
Crystal structure of GDP-bound LepA from Aquifex aeolicus
Descriptor: GTP-binding protein LepA, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
Authors:Kawazoe, M, Takemoto, C, Kaminishi, T, Nishino, A, Nakayama-Ushikoshi, R, Hanawa-Suetsugu, K, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-20
Release date:2008-04-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Crystal structures of GTP-binding protein LepA from Aquifex aeolicus.
To be Published
2YWK
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BU of 2ywk by Molmil
Crystal structure of RRM-domain derived from human putative RNA-binding protein 11
Descriptor: Putative RNA-binding protein 11
Authors:Kawazoe, M, Takemoto, C, Kaminishi, T, Uchikubo-Kamo, T, Nishino, A, Morita, S, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-20
Release date:2008-04-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Crystal structure of RRM-domain derived from human putative RNA-binding protein 11
To be Published
2YWQ
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BU of 2ywq by Molmil
Crystal structure of Thermus thermophilus Protein Y N-terminal domain
Descriptor: Ribosomal subunit interface protein
Authors:Kawazoe, M, Takemoto, C, Kaminishi, T, Tatsuguchi, A, Saito, Y, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-21
Release date:2008-04-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Crystal structure of Thermus thermophilus Protein Y N-terminal domain
To be Published
2YWF
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BU of 2ywf by Molmil
Crystal structure of GMPPNP-bound LepA from Aquifex aeolicus
Descriptor: GTP-binding protein lepA, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
Authors:Kawazoe, M, Takemoto, C, Kaminishi, T, Nishino, A, Nakayama-Ushikoshi, R, Hanawa-Suetsugu, K, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-20
Release date:2008-04-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Crystal structures of GTP-binding protein LepA from Aquifex aeolicus
To be Published
2YWE
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BU of 2ywe by Molmil
Crystal structure of LepA from Aquifex aeolicus
Descriptor: GTP-binding protein lepA
Authors:Kawazoe, M, Takemoto, C, Kaminishi, T, Nishino, A, Nakayama-Ushikoshi, R, Hanawa-Suetsugu, K, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-20
Release date:2008-04-29
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structures of GTP-binding protein LepA from Aquifex aeolicus
To be Published
2YWG
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BU of 2ywg by Molmil
Crystal structure of GTP-bound LepA from Aquifex aeolicus
Descriptor: GTP-binding protein LepA, GUANOSINE-5'-TRIPHOSPHATE
Authors:Kawazoe, M, Takemoto, C, Kaminishi, T, Nishino, A, Nakayama-Ushikoshi, R, Hanawa-Suetsugu, K, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-20
Release date:2008-04-29
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.94 Å)
Cite:Crystal structures of GTP-binding protein LepA from Aquifex aeolicus
To be Published
2CXH
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BU of 2cxh by Molmil
Crystal structure of probable ribosomal biogenesis protein from Aeropyrum pernix K1
Descriptor: Probable brix-domain ribosomal biogenesis protein
Authors:Kawazoe, M, Takemoto, C, Hanawa-Suetsugu, K, Kaminishi, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-06-29
Release date:2005-12-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of probable ribosomal biogenesis protein from Aeropyrum pernix K1
To be Published
2DYK
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BU of 2dyk by Molmil
Crystal structure of N-terminal GTP-binding domain of EngA from Thermus thermophilus HB8
Descriptor: GTP-binding protein, GUANOSINE-5'-DIPHOSPHATE
Authors:Kawazoe, M, Takemoto, C, Fusatomi, E, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-09-14
Release date:2007-03-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Crystal structure of N-terminal GTP-binding domain of EngA from Thermus thermophilus HB8
to be published
2DYI
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BU of 2dyi by Molmil
Crystal structure of 16S ribosomal RNA processing protein RimM from Thermus thermophilus HB8
Descriptor: Probable 16S rRNA-processing protein rimM
Authors:Kawazoe, M, Takemoto, C, Kaminishi, T, Tatsuguchi, A, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-09-14
Release date:2007-03-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of 16S ribosomal RNA processing protein RimM from Thermus thermophilus HB8
To be published
2DYJ
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BU of 2dyj by Molmil
Crystal structure of ribosome-binding factor A from Thermus thermophilus HB8
Descriptor: Ribosome-binding factor A
Authors:Kawazoe, M, Takemoto, C, Nakayama-Ushikoshi, R, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-09-14
Release date:2007-03-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Structural aspects of RbfA action during small ribosomal subunit assembly.
Mol.Cell, 28, 2007
4WR5
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BU of 4wr5 by Molmil
Crystal Structure of GST Mutated with Halogenated Tyrosine (7cGST-1)
Descriptor: GLUTATHIONE, Glutathione S-transferase class-mu 26 kDa isozyme, SULFATE ION
Authors:Akasaka, R, Kawazoe, M, Tomabechi, Y, Ohtake, K, Itagaki, T, Takemoto, C, Shirouzu, M, Yokoyama, S, Sakamoto, K.
Deposit date:2014-10-23
Release date:2015-08-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Protein stabilization utilizing a redefined codon
Sci Rep, 5, 2015
4WR4
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BU of 4wr4 by Molmil
Crystal Structure of GST Mutated with Halogenated Tyrosine (7bGST-1)
Descriptor: GLUTATHIONE, Glutathione S-transferase class-mu 26 kDa isozyme, SULFATE ION
Authors:Akasaka, R, Kawazoe, M, Tomabechi, Y, Ohtake, K, Itagaki, T, Takemoto, C, Shirouzu, M, Yokoyama, S, Sakamoto, K.
Deposit date:2014-10-23
Release date:2015-08-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Protein stabilization utilizing a redefined codon
Sci Rep, 5, 2015
3LLH
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BU of 3llh by Molmil
Crystal structure of the first dsRBD of TAR RNA-binding protein 2
Descriptor: MALONATE ION, RISC-loading complex subunit TARBP2
Authors:Yamashita, S, Kawazoe, M, Takemoto, C, Sekine, S, Wakiyama, M, Yokoyama, S.
Deposit date:2010-01-29
Release date:2010-12-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:The structures of dsRBDs of human TRBP
To be Published
2ZWV
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BU of 2zwv by Molmil
Crystal structure of Thermus thermophilus 16S rRNA methyltransferase RsmC (TTHA0533)
Descriptor: Probable ribosomal RNA small subunit methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Wang, H, Kawazoe, M, Kaminishi, T, Tatsuguchi, A, Naoe, C, Terada, T, Shirouzu, M, Takemoto, C, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2008-12-18
Release date:2009-12-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of Thermus thermophilus 16S rRNA methyltransferase RsmC (TTHA0533)
to be published
2KHE
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BU of 2khe by Molmil
Solution Structure of the Bacterial Toxin Rele from Thermus Thermophilus HB8
Descriptor: Toxin-like protein
Authors:Suzuki, S, Kawazoe, M, Kaminishi, T, Takemoto, C, Muto, Y, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2009-04-03
Release date:2010-03-31
Last modified:2021-11-10
Method:SOLUTION NMR
Cite:Solution Structure of the Bacterial Toxin Rele from Thermus Thermophilus HB8
To be Published
2PA2
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BU of 2pa2 by Molmil
Crystal structure of human Ribosomal protein L10 core domain
Descriptor: 60S ribosomal protein L10, POTASSIUM ION
Authors:Nishimura, M, Kaminishi, T, Takemoto, C, Kawazoe, M, Yoshida, T, Tanaka, A, Sugano, S, Shirouzu, M, Ohkubo, T, Yokoyama, S, Kobayashi, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-27
Release date:2008-03-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of Human Ribosomal Protein L10 Core Domain Reveals Eukaryote-Specific Motifs in Addition to the Conserved Fold
J.Mol.Biol., 377, 2008
2R1G
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BU of 2r1g by Molmil
Coordinates of the thermus thermophilus 30S components neighboring RbfA as obtained by fitting into the CRYO-EM map of A 30S-RBFA complex
Descriptor: 16S RIBOSOMAL RNA HELIX 1, 16S RIBOSOMAL RNA HELIX 18, 16S RIBOSOMAL RNA HELIX 27, ...
Authors:Datta, P.P, Wilson, D.N, Kawazoe, M, Swami, N.K, Kaminishi, T, Sharma, M.R, Booth, T.M, Takemoto, C, Fucini, P, Yokoyama, S, Agrawal, R.K.
Deposit date:2007-08-22
Release date:2008-03-18
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (12.5 Å)
Cite:Structural aspects of RbfA action during small ribosomal subunit assembly.
Mol.Cell, 28, 2007
2R1C
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BU of 2r1c by Molmil
Coordinates of the thermus thermophilus ribosome binding factor A (RbfA) homology model as fitted into the CRYO-EM map of a 30S-RBFA complex
Descriptor: Ribosome-binding factor A
Authors:Datta, P.P, Wilson, D.N, Kawazoe, M, Swami, N.K, Kaminishi, T, Sharma, M.R, Booth, T.M, Takemoto, C, Fucini, P, Yokoyama, S, Agrawal, R.K.
Deposit date:2007-08-22
Release date:2008-03-18
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (12.5 Å)
Cite:Structural aspects of RbfA action during small ribosomal subunit assembly.
Mol.Cell, 28, 2007
2Z0T
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BU of 2z0t by Molmil
Crystal structure of hypothetical protein PH0355
Descriptor: Putative uncharacterized protein PH0355
Authors:Murayama, K, Takemoto, C, Kato-Murayama, M, Kawazoe, M, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-07
Release date:2007-11-13
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of hypothetical protein PH0355
To be Published
2Z1B
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BU of 2z1b by Molmil
Crystal Structure of 5-aminolevulinic acid dehydratase (ALAD) from Mus musculs
Descriptor: Delta-aminolevulinic acid dehydratase
Authors:Xie, Y, Wang, H, Kawazoe, M, Kishishita, S, Murayama, K, Takemoto, C, Terada, T, Shirozu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-08
Release date:2008-05-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Crystal Structure of 5-aminolevulinic acid dehydratase (ALAD) from Mus musculs
To be Published
2ZM6
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BU of 2zm6 by Molmil
Crystal structure of the Thermus thermophilus 30S ribosomal subunit
Descriptor: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Kaminishi, T, Wang, H, Kawazoe, M, Ishii, R, Schluenzen, F, Hanawa-Suetsugu, K, Wilson, D.N, Nomura, M, Takemoto, C, Shirouzu, M, Fucini, P, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2008-04-11
Release date:2009-04-14
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Crystal structure of the Thermus thermophilus 30S ribosomal subunit
To be Published
2Z0I
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BU of 2z0i by Molmil
Crystal Structure of 5-aminolevulinic acid dehydratase (ALAD) from Mus musculus
Descriptor: Delta-aminolevulinic acid dehydratase
Authors:Wang, H, Xie, Y, Kawazoe, M, Kishishita, S, Murayama, K, Takemoto, C, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-07
Release date:2008-05-13
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal Structure of 5-aminolevulinic acid dehydratase (ALAD) from Mus musculus
To be Published
2DOG
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BU of 2dog by Molmil
Solution structure of the N-terminal domain of RimM from Thermus thermophilus HB8
Descriptor: Probable 16S rRNA-processing protein rimM
Authors:Suzuki, S, Matsumoto, E, Tatsuguchi, A, Kawazoe, M, Kaminishi, T, Takemoto, C, Shirouzu, M, Muto, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-04-28
Release date:2007-04-17
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structural characterization of the ribosome maturation protein, RimM
J.Bacteriol., 189, 2007
3A1P
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BU of 3a1p by Molmil
Structure of Ribosome maturation protein RimM and Ribosomal protein S19
Descriptor: 30S ribosomal protein S19, Ribosome maturation factor rimM, UNKNOWN ATOM OR ION
Authors:Kaminishi, T, Takemoto, C, Tatsuguchi, A, Kawazoe, M, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2009-04-21
Release date:2010-04-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of Ribosome maturation protein RimM and Ribosomal protein S19
To be Published

 

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