Author results

1QTO
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1.5 A CRYSTAL STRUCTURE OF A BLEOMYCIN RESISTANCE DETERMINANT FROM BLEOMYCIN-PRODUCING STREPTOMYCES VERTICILLUS
Descriptor:BLEOMYCIN-BINDING PROTEIN
Authors:Kawano, Y., Kumagai, T., Muta, K., Matoba, Y., Davies, J., Sugiyama, M.
Deposit date:1999-06-28
Release date:2000-06-28
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The 1.5 A crystal structure of a bleomycin resistance determinant from bleomycin-producing Streptomyces verticillus.
J.Mol.Biol., 295, 2000
2CYZ
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PHOTO-ACTIVATION STATE OF FE-TYPE NHASE IN ANAEROBIC CONDITION
Descriptor:Nitrile hydratase subunit alpha, Nitrile hydratase subunit beta, FE (III) ION, ...
Authors:Kawano, Y., Hashimoto, K., Odaka, M., Nakayama, H., Takio, K., Endo, I., Kamiya, N., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-07-09
Release date:2006-01-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:photo-activation state of Fe-type NHase in anaerobic condition
To be Published
2CZ0
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PHOTO-ACTIVATION STATE OF FE-TYPE NHASE IN AEROBIC CONDITION
Descriptor:Nitrile hydratase subunit alpha, Nitrile hydratase subunit beta, FE (III) ION, ...
Authors:Kawano, Y., Hashimoto, K., Odaka, M., Nakayama, H., Takio, K., Endo, I., Kamiya, N., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-07-09
Release date:2006-01-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:photo-activation state of Fe-type NHase in aerobic condition
To be Published
2CZ1
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PHOTO-ACTIVATION STATE OF FE-TYPE NHASE WITH N-BA IN ANAEROBIC CONDITION
Descriptor:Nitrile hydratase subunit alpha, Nitrile hydratase subunit beta, FE (III) ION, ...
Authors:Kawano, Y., Hashimoto, K., Odaka, M., Nakayama, H., Takio, K., Endo, I., Kamiya, N., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-07-09
Release date:2006-01-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:photo-activation state of Fe-type NHase with n-BA in anaerobic condition
To be Published
2YW3
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CRYSTAL STRUCTURE ANALYSIS OF THE 4-HYDROXY-2-OXOGLUTARATE ALDOLASE/2-DEYDRO-3-DEOXYPHOSPHOGLUCONATE ALDOLASE FROM TTHB1
Descriptor:4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase, PHOSPHATE ION
Authors:Kawano, Y., Hashimoto, K., Kamiya, N., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-19
Release date:2007-10-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Crystal Structure Analysis of the 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase from TTHB1
To be published
2YW4
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CRYSTAL STRUCTURE ANALYSIS OF THE 4-HYDROXY-2-OXOGLUTARATE ALDOLASE/2-DEYDRO-3-DEOXYPHOSPHOGLUCONATE ALDOLASE FROM TTHB1
Descriptor:4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase
Authors:Kawano, Y., Hashimoto, K., Kamiya, N., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-19
Release date:2007-10-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:Crystal Structure Analysis of the 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase from TTHB1
To be published
6I59
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LONG WAVELENGTH NATIVE-SAD PHASING OF SEN1 HELICASE
Descriptor:Helicase SEN1, ADENOSINE-5'-DIPHOSPHATE, 1,2-ETHANEDIOL, ...
Authors:Basu, S., Olieric, V., Matsugaki, N., Kawano, Y., Takashi, T., Huang, C.Y., Leonarski, F., Yamada, Y., Vera, L., Olieric, N., Basquin, J., Wojdyla, J.A., Diederichs, K., Yamamoto, M., Bunk, O., Wang, M.
Deposit date:2018-11-13
Release date:2019-03-13
Last modified:2019-06-12
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Long-wavelength native-SAD phasing: opportunities and challenges.
Iucrj, 6, 2019
6I5C
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LONG WAVELENGTH NATIVE-SAD PHASING OF TUBULIN-STATHMIN-TTL COMPLEX
Descriptor:Tubulin alpha-1B chain, Tubulin beta-2B chain, Stathmin-4, ...
Authors:Basu, S., Olieric, V., Matsugaki, N., Kawano, Y., Takashi, T., Huang, C.Y., Leonarski, F., Yamada, Y., Vera, L., Olieric, N., Basquin, J., Wojdyla, J.A., Diederichs, K., Yamamoto, M., Bunk, O., Wang, M.
Deposit date:2018-11-13
Release date:2019-03-13
Last modified:2019-05-29
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Long-wavelength native-SAD phasing: opportunities and challenges.
Iucrj, 6, 2019
2CWT
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CATALYTIC BASE DELETION IN COPPER AMINE OXIDASE FROM ARTHROBACTER GLOBIFORMIS
Descriptor:Phenylethylamine oxidase, COPPER (II) ION
Authors:Chiu, Y.C., Okajima, T., Murakawa, T., Uchida, M., Taki, M., Hirota, S., Kim, M., Yamaguchi, H., Kawano, Y., Kamiya, N., Kuroda, S., Hayashi, H., Yamamoto, Y., Tanizawa, K.
Deposit date:2005-06-26
Release date:2006-05-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Kinetic and Structural Studies on the Catalytic Role of the Aspartic Acid Residue Conserved in Copper Amine Oxidase(,)
Biochemistry, 45, 2006
2CWU
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SUBSTRATE SCHIFF-BASE INTERMEDIATE OF COPPER AMINE OXIDASE FROM ARTHROBACTER GLOBIFORMIS
Descriptor:Phenylethylamine oxidase, COPPER (II) ION
Authors:Chiu, Y.C., Okajima, T., Murakawa, T., Uchida, M., Taki, M., Hirota, S., Kim, M., Yamaguchi, H., Kawano, Y., Kamiya, N., Kuroda, S., Hayashi, H., Yamamoto, Y., Tanizawa, K.
Deposit date:2005-06-26
Release date:2006-05-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Kinetic and Structural Studies on the Catalytic Role of the Aspartic Acid Residue Conserved in Copper Amine Oxidase(,)
Biochemistry, 45, 2006
2CWV
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PRODUCT SCHIFF-BASE INTERMEDIATE OF COPPER AMINE OXIDASE FROM ARTHROBACTER GLOBIFORMIS
Descriptor:Phenylethylamine oxidase, COPPER (II) ION
Authors:Chiu, Y.C., Okajima, T., Murakawa, T., Uchida, M., Taki, M., Hirota, S., Kim, M., Yamaguchi, H., Kawano, Y., Kamiya, N., Kuroda, S., Hayashi, H., Yamamoto, Y., Tanizawa, K.
Deposit date:2005-06-26
Release date:2006-05-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Kinetic and Structural Studies on the Catalytic Role of the Aspartic Acid Residue Conserved in Copper Amine Oxidase(,)
Biochemistry, 45, 2006
2DD4
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THIOCYANATE HYDROLASE (SCNASE) FROM THIOBACILLUS THIOPARUS RECOMBINANT APO-ENZYME
Descriptor:Thiocyanate hydrolase alpha subunit, Thiocyanate hydrolase beta subunit, Thiocyanate hydrolase gamma subunit, ...
Authors:Arakawa, T., Kawano, Y., Kataoka, S., Katayama, Y., Kamiya, N., Yohda, M., Odaka, M.
Deposit date:2006-01-19
Release date:2007-01-30
Last modified:2019-07-10
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Structure of thiocyanate hydrolase: a new nitrile hydratase family protein with a novel five-coordinate cobalt(III) center.
J.Mol.Biol., 366, 2007
2DD5
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THIOCYANATE HYDROLASE (SCNASE) FROM THIOBACILLUS THIOPARUS NATIVE HOLO-ENZYME
Descriptor:Thiocyanate hydrolase alpha subunit, Thiocyanate hydrolase beta subunit, Thiocyanate hydrolase gamma subunit, ...
Authors:Arakawa, T., Kawano, Y., Kataoka, S., Katayama, Y., Kamiya, N., Yohda, M., Odaka, M.
Deposit date:2006-01-19
Release date:2007-01-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of thiocyanate hydrolase: a new nitrile hydratase family protein with a novel five-coordinate cobalt(III) center.
J.Mol.Biol., 366, 2007
2DXB
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RECOMBINANT THIOCYANATE HYDROLASE COMPRISING PARTIALLY-MODIFIED COBALT CENTERS
Descriptor:Thiocyanate hydrolase subunit alpha, Thiocyanate hydrolase subunit beta, Thiocyanate hydrolase subunit gamma, ...
Authors:Arakawa, T., Kawano, Y., Katayama, Y., Yohda, M., Odaka, M.
Deposit date:2006-08-25
Release date:2007-08-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural Basis for Catalytic Activation of Thiocyanate Hydrolase Involving Metal-Ligated Cysteine Modification
J.Am.Chem.Soc., 131, 2009
2DXC
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RECOMBINANT THIOCYANATE HYDROLASE, FULLY-MATURED FORM
Descriptor:Thiocyanate hydrolase subunit alpha, Thiocyanate hydrolase subunit beta, Thiocyanate hydrolase subunit gamma, ...
Authors:Arakawa, T., Kawano, Y., Katayama, Y., Yohda, M., Odaka, M.
Deposit date:2006-08-25
Release date:2007-08-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Basis for Catalytic Activation of Thiocyanate Hydrolase Involving Metal-Ligated Cysteine Modification
J.Am.Chem.Soc., 131, 2009
2Z1Q
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CRYSTAL STRUCTURE OF ACYL COA DEHYDROGENASE
Descriptor:Acyl-CoA dehydrogenase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Hikima, T., Kawano, Y., Nodake, Y., Kamiya, N., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-11
Release date:2008-05-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of acyl CoA dehydrogenase from Thermus thermophilus HB8
To be Published
2ZZD
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RECOMBINANT THIOCYANATE HYDROLASE, AIR-OXIDIZED FORM OF HOLO-ENZYME
Descriptor:Thiocyanate hydrolase subunit alpha, Thiocyanate hydrolase subunit beta, Thiocyanate hydrolase subunit gamma, ...
Authors:Arakawa, T., Kawano, Y., Katayama, Y., Yohda, M., Odaka, M.
Deposit date:2009-02-09
Release date:2009-10-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Structural Basis for Catalytic Activation of Thiocyanate Hydrolase Involving Metal-Ligated Cysteine Modification
J.Am.Chem.Soc., 131, 2009
1WN0
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CRYSTAL STRUCTURE OF HISTIDINE-CONTAINING PHOSPHOTRANSFER PROTEIN, ZMHP2, FROM MAIZE
Descriptor:histidine-containing phosphotransfer protein
Authors:Sugawara, H., Kawano, Y., Hatakeyama, T., Yamaya, T., Kamiya, N., Sakakibara, H., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-07-24
Release date:2005-01-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of the histidine-containing phosphotransfer protein ZmHP2 from maize
Protein Sci., 14, 2005
2CZ6
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COMPLEX OF INACTIVE FE-TYPE NHASE WITH CYCLOHEXYL ISOCYANIDE
Descriptor:Nitrile hydratase subunit alpha, Nitrile hydratase subunit beta, FE (III) ION, ...
Authors:Nojiri, M., Kawano, Y., Hashimoto, K., Kamiya, N., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-07-11
Release date:2006-01-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:x-ray snap shots of inhibitor binding process in photo-reactive nitrile hydratase
To be Published
2CZ7
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FE-TYPE NHASE PHOTO-ACTIVATED FOR 75MIN AT 105K
Descriptor:Nitrile hydratase subunit alpha, Nitrile hydratase subunit beta, FE (III) ION, ...
Authors:Nojiri, M., Kawano, Y., Hashimoto, K., Kamiya, N., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-07-11
Release date:2006-01-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Active Center Structures of Photo-reactive Nitrile Hydratase during its Photo-activation Process
To be Published
2D0Q
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COMPLEX OF FE-TYPE NHASE WITH CYCLOHEXYL ISOCYANIDE, PHOTO-ACTIVATED FOR 1HR AT 277K
Descriptor:Nitrile hydratase subunit alpha, Nitrile hydratase subunit beta, FE (III) ION, ...
Authors:Nojiri, M., Kawano, Y., Hashimoto, K., Kamiya, N., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-08-05
Release date:2006-02-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:X-ray snap shots of Inhibitor Binding Process in Photo-reactive Nitrile Hydratase
To be Published
2ZCF
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MUTATIONAL STUDY ON ALPHA-GLN90 OF FE-TYPE NITRILE HYDRATASE FROM RHODOCOCCUS SP. N771
Descriptor:Nitrile hydratase subunit alpha, Nitrile hydratase subunit beta, FE (III) ION, ...
Authors:Takarada, H., Kawano, Y., Hashimoto, K., Nakayama, H., Ueda, S., Yohda, M., Kamiya, N., Dohmae, N., Maeda, M., Odaka, M., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-11-08
Release date:2007-11-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Mutational study on alphaGln90 of Fe-type nitrile hydratase from Rhodococcus sp. N771
Biosci.Biotechnol.Biochem., 70, 2006
3X3X
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COPPER AMINE OXIDASE FROM ARTHROBACTER GLOBIFORMIS ANAEROBICALLY REDUCED BY PHENYLETHYLAMINE
Descriptor:Phenylethylamine oxidase, COPPER (II) ION, SODIUM ION, ...
Authors:Okajima, T., Nakanishi, S., Murakawa, T., Kataoka, M., Hayashi, H., Hamaguchi, A., Nakai, T., Kawano, Y., Yamaguchi, H., Tanizawa, K.
Deposit date:2015-03-10
Release date:2015-08-19
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Probing the Catalytic Mechanism of Copper Amine Oxidase from Arthrobacter globiformis with Halide Ions
J.Biol.Chem., 2015
3X3Y
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COPPER AMINE OXIDASE FROM ARTHROBACTER GLOBIFORMIS ANAEROBICALLY REDUCED BY HISTAMINE
Descriptor:Phenylethylamine oxidase, COPPER (II) ION, GLYCEROL, ...
Authors:Okajima, T., Nakanishi, S., Murakawa, T., Kataoka, M., Hayashi, H., Hamaguchi, A., Nakai, T., Kawano, Y., Yamaguchi, H., Tanizawa, K.
Deposit date:2015-03-10
Release date:2015-08-19
Method:X-RAY DIFFRACTION (1.499 Å)
Cite:Probing the Catalytic Mechanism of Copper Amine Oxidase from Arthrobacter globiformis with Halide Ions
J.Biol.Chem., 2015
3X3Z
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COPPER AMINE OXIDASE FROM ARTHROBACTER GLOBIFORMIS: AMINORESORCINOL FORM PRODUCED BY ANAEROBIC REDUCTION WITH ETHYLAMINE HYDROCHLORIDE
Descriptor:Phenylethylamine oxidase, COPPER (II) ION, CHLORIDE ION, ...
Authors:Okajima, T., Nakanishi, S., Murakawa, T., Kataoka, M., Hayashi, H., Hamaguchi, A., Nakai, T., Kawano, Y., Yamaguchi, H., Tanizawa, K.
Deposit date:2015-03-10
Release date:2015-08-19
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Probing the Catalytic Mechanism of Copper Amine Oxidase from Arthrobacter globiformis with Halide Ions
J.Biol.Chem., 2015