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8JB8
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BU of 8jb8 by Molmil
Crystal structure of CMY-185 complex with ceftazidime
Descriptor: ACYLATED CEFTAZIDIME, Beta-lactamase
Authors:Kawai, A, Doi, Y.
Deposit date:2023-05-08
Release date:2023-12-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural insights into the molecular mechanism of high-level ceftazidime-avibactam resistance conferred by CMY-185.
Mbio, 15, 2024
8JB7
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BU of 8jb7 by Molmil
Crystal structure of CMY-185
Descriptor: Beta-lactamase, SULFATE ION
Authors:Kawai, A, Doi, Y.
Deposit date:2023-05-08
Release date:2023-12-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structural insights into the molecular mechanism of high-level ceftazidime-avibactam resistance conferred by CMY-185.
Mbio, 15, 2024
4ZBZ
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BU of 4zbz by Molmil
Family 4 uracil-DNA glycosylase from Sulfolobus tokodaii (free form, X-ray wavelength=1.5418)
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, IRON/SULFUR CLUSTER, ...
Authors:Kawai, A, Miyamoto, S.
Deposit date:2015-04-15
Release date:2015-09-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of family 4 uracil-DNA glycosylase from Sulfolobus tokodaii and a function of tyrosine 170 in DNA binding
Febs Lett., 589, 2015
4ZBY
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BU of 4zby by Molmil
Family 4 uracil-DNA glycosylase from Sulfolobus tokodaii (uracil complex form)
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, IRON/SULFUR CLUSTER, URACIL, ...
Authors:Kawai, A, Miyamoto, S.
Deposit date:2015-04-15
Release date:2015-09-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of family 4 uracil-DNA glycosylase from Sulfolobus tokodaii and a function of tyrosine 170 in DNA binding
Febs Lett., 589, 2015
4ZBX
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BU of 4zbx by Molmil
Family 4 uracil-DNA glycosylase from Sulfolobus tokodaii (free form, X-ray wavelength=0.9000)
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, IRON/SULFUR CLUSTER, Uracil-DNA glycosylase
Authors:Kawai, A, Miyamoto, S.
Deposit date:2015-04-15
Release date:2015-09-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of family 4 uracil-DNA glycosylase from Sulfolobus tokodaii and a function of tyrosine 170 in DNA binding
Febs Lett., 589, 2015
7X7X
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BU of 7x7x by Molmil
Human serum albumin complex with deschloro-aripiprazole
Descriptor: 7-[4-(4-phenylpiperazin-1-yl)butoxy]-3,4-dihydro-1H-quinolin-2-one, PHOSPHATE ION, Serum albumin
Authors:Kawai, A, Otagiri, M.
Deposit date:2022-03-10
Release date:2022-09-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Chlorine Atoms of an Aripiprazole Molecule Control the Geometry and Motion of Aripiprazole and Deschloro-aripiprazole in Subdomain IIIA of Human Serum Albumin.
Acs Omega, 7, 2022
6LC8
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BU of 6lc8 by Molmil
Crystal structure of AmpC Ent385 complex form with avibactam
Descriptor: (2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide, 1,4-DIETHYLENE DIOXIDE, Beta-lactamase, ...
Authors:Kawai, A, Doi, Y.
Deposit date:2019-11-18
Release date:2020-04-22
Last modified:2022-03-23
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural Basis of Reduced Susceptibility to Ceftazidime-Avibactam and Cefiderocol inEnterobacter cloacaeDue to AmpC R2 Loop Deletion.
Antimicrob.Agents Chemother., 64, 2020
6LC9
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BU of 6lc9 by Molmil
Crystal structure of AmpC Ent385 complex form with ceftazidime
Descriptor: 1,4-DIETHYLENE DIOXIDE, ACYLATED CEFTAZIDIME, Beta-lactamase, ...
Authors:Kawai, A, Doi, Y.
Deposit date:2019-11-18
Release date:2020-04-22
Last modified:2022-03-23
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural Basis of Reduced Susceptibility to Ceftazidime-Avibactam and Cefiderocol inEnterobacter cloacaeDue to AmpC R2 Loop Deletion.
Antimicrob.Agents Chemother., 64, 2020
6LC7
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BU of 6lc7 by Molmil
Crystal structure of AmpC Ent385 free form
Descriptor: 1,4-DIETHYLENE DIOXIDE, Beta-lactamase, GLYCEROL, ...
Authors:Kawai, A, Doi, Y.
Deposit date:2019-11-18
Release date:2020-04-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural Basis of Reduced Susceptibility to Ceftazidime-Avibactam and Cefiderocol inEnterobacter cloacaeDue to AmpC R2 Loop Deletion.
Antimicrob.Agents Chemother., 64, 2020
5X52
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BU of 5x52 by Molmil
Human serum albumin complexed with octanoate and N-acetyl-L-methionine
Descriptor: N-ACETYLMETHIONINE, OCTANOIC ACID (CAPRYLIC ACID), PHOSPHATE ION, ...
Authors:Kawai, A, Otagiri, M.
Deposit date:2017-02-14
Release date:2017-05-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.005 Å)
Cite:Crystallographic analysis of the ternary complex of octanoate and N-acetyl-l-methionine with human serum albumin reveals the mode of their stabilizing interactions
Biochim. Biophys. Acta, 1865, 2017
5YOQ
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BU of 5yoq by Molmil
Human serum albumin complexed with sodium 4-phenylbutyrate
Descriptor: 4-PHENYL-BUTANOIC ACID, PHOSPHATE ION, Serum albumin
Authors:Kawai, A, Otagiri, M.
Deposit date:2017-10-30
Release date:2018-02-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal structure analysis of human serum albumin complexed with sodium 4-phenylbutyrate.
Biochem Biophys Rep, 13, 2018
7EHF
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BU of 7ehf by Molmil
Crystal structure of the aminoglycoside resistance methyltransferase NpmB1
Descriptor: 1,2-ETHANEDIOL, 16S rRNA methyltransferase, CHLORIDE ION, ...
Authors:Kawai, A, Doi, Y.
Deposit date:2021-03-29
Release date:2021-08-11
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Functional and Structural Characterization of Acquired 16S rRNA Methyltransferase NpmB1 Conferring Pan-Aminoglycoside Resistance.
Antimicrob.Agents Chemother., 65, 2021
3AIX
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BU of 3aix by Molmil
Crystal structure of PCNA2-PCNA3 complex from Sulfolobus tokodaii (I222)
Descriptor: DNA polymerase sliding clamp B, DNA polymerase sliding clamp C, SULFATE ION
Authors:Kawai, A, Higuchi, S, Miyamoto, S.
Deposit date:2010-05-18
Release date:2011-05-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:A novel heterotetrameric structure of the crenarchaeal PCNA2-PCNA3 complex
J.Struct.Biol., 174, 2011
3AIZ
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BU of 3aiz by Molmil
Crystal structure of PCNA2-PCNA3 complex from Sulfolobus tokodaii (P21212)
Descriptor: DNA polymerase sliding clamp B, DNA polymerase sliding clamp C, SULFATE ION
Authors:Kawai, A, Higuchi, S, Miyamoto, S.
Deposit date:2010-05-18
Release date:2011-05-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A novel heterotetrameric structure of the crenarchaeal PCNA2-PCNA3 complex
J.Struct.Biol., 174, 2011
7VR9
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BU of 7vr9 by Molmil
Crystal structure of human serum albumin complex with aripiprazole and myristic acid
Descriptor: 7-[4-[4-[2,3-bis(chloranyl)phenyl]piperazin-1-yl]butoxy]-3,4-dihydro-1H-quinolin-2-one, MYRISTIC ACID, Serum albumin
Authors:Kawai, A, Yamasaki, K, Otagiri, M.
Deposit date:2021-10-22
Release date:2022-02-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Effects of Myristate on the Induced Circular Dichroism Spectra of Aripiprazole Bound to Human Serum Albumin: A Structural-Chemical Investigation
Acs Omega, 7, 2022
7WKZ
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BU of 7wkz by Molmil
Crystal structure of the HSA complex with mycophenolate and aripiprazole
Descriptor: 7-[4-[4-[2,3-bis(chloranyl)phenyl]piperazin-1-yl]butoxy]-3,4-dihydro-1H-quinolin-2-one, MYCOPHENOLIC ACID, Serum albumin
Authors:Kawai, A, Yamasaki, K.
Deposit date:2022-01-12
Release date:2022-12-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.992 Å)
Cite:Structural Basis of the Change in the Interaction Between Mycophenolic Acid and Subdomain IIA of Human Serum Albumin During Renal Failure.
J.Med.Chem., 66, 2023
6A7P
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BU of 6a7p by Molmil
Human serum albumin complexed with aripiprazole
Descriptor: 7-[4-[4-[2,3-bis(chloranyl)phenyl]piperazin-1-yl]butoxy]-3,4-dihydro-1H-quinolin-2-one, PHOSPHATE ION, POTASSIUM ION, ...
Authors:Kawai, A, Yamasaki, K, Otagiri, M.
Deposit date:2018-07-03
Release date:2018-10-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Analysis of the Binding of Aripiprazole to Human Serum Albumin: The Importance of a Chloro-Group in the Chemical Structure.
Acs Omega, 3, 2018
7D6J
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BU of 7d6j by Molmil
Human serum albumin complexed with benzbromarone
Descriptor: Serum albumin, [3,5-bis(bromanyl)-4-oxidanyl-phenyl]-(2-ethyl-1-benzofuran-3-yl)methanone
Authors:Kawai, A, Yamasaki, K.
Deposit date:2020-09-30
Release date:2021-02-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.29 Å)
Cite:Interaction of Benzbromarone with Subdomains IIIA and IB/IIA on Human Serum Albumin as the Primary and Secondary Binding Regions.
Mol Pharm., 18, 2021

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PDB entries from 2024-04-10

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