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6ZWA
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BU of 6zwa by Molmil
CLIP peptide bound to chicken MHC class II molecule (BL-2) from B19 haplotype
Descriptor: DI(HYDROXYETHYL)ETHER, Invariant chain isoform p41,MHC class II beta chain 2, MHC class II alpha chain
Authors:Halabi, S, Brear, P, Kaufman, J.
Deposit date:2020-07-28
Release date:2021-08-11
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:CLIP peptide bound to chicken MHC class II BL-2 from B19 haplotype
To Be Published
7APZ
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BU of 7apz by Molmil
CLIP peptide bound to chicken MHC class II molecule (BL-2) from B2 haplotype with a decamer mode of binding
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETYL GROUP, DI(HYDROXYETHYL)ETHER, ...
Authors:Halabi, S, Kaufman, J.
Deposit date:2020-10-20
Release date:2021-11-03
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:CLIP peptide bound to chicken MHC class II molecule (BL-2) from B2 haplotype with a decamer mode of binding
To Be Published
6S6D
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BU of 6s6d by Molmil
Crystal structure of RagA-Q66L-GTP/RagC-S75N-GDP GTPase heterodimer complex
Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Anandapadamanaban, M, Masson, G.R, Perisic, O, Kaufman, J, Williams, R.L.
Deposit date:2019-07-02
Release date:2019-10-16
Last modified:2019-10-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Architecture of human Rag GTPase heterodimers and their complex with mTORC1.
Science, 366, 2019
6S6A
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BU of 6s6a by Molmil
Crystal structure of RagA-Q66L/RagC-T90N GTPase heterodimer complex
Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Anandapadamanaban, M, Masson, G.R, Perisic, O, Kaufman, J, Williams, R.L.
Deposit date:2019-07-02
Release date:2019-10-16
Last modified:2019-10-23
Method:X-RAY DIFFRACTION (2.63 Å)
Cite:Architecture of human Rag GTPase heterodimers and their complex with mTORC1.
Science, 366, 2019
2NEF
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BU of 2nef by Molmil
HIV-1 NEF (REGULATORY FACTOR), NMR, 40 STRUCTURES
Descriptor: NEGATIVE FACTOR (F-PROTEIN)
Authors:Grzesiek, S, Bax, A, Clore, G.M, Gronenborn, A.M, Hu, J.S, Kaufman, J, Palmer, I, Stahl, S.J, Tjandra, N, Wingfield, P.T.
Deposit date:1997-02-12
Release date:1997-07-07
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Refined solution structure and backbone dynamics of HIV-1 Nef.
Protein Sci., 6, 1997
7PDY
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BU of 7pdy by Molmil
A viral peptide from Marek's disease virus bound to chicken MHC-II molecule
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 38 kDa phosphoprotein,MHC class II beta chain, ...
Authors:Goryanin, A, Cook, A.G, Kaufman, J, Halabi, S.
Deposit date:2021-08-09
Release date:2022-08-24
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Viral peptide bound to chicken MHC-II molecule
To Be Published
4G42
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BU of 4g42 by Molmil
Structure of the Chicken MHC Class I Molecule BF2*0401 complexed to pepitde P8D
Descriptor: 8-MERIC PEPTIDE P8D, Beta-2 microglobulin, MHC class I alpha chain 2
Authors:Zhang, J, Chen, Y, Qi, J, Gao, F, Liu, J, Kaufman, J, Xia, C, Gao, G.F.
Deposit date:2012-07-16
Release date:2012-11-21
Method:X-RAY DIFFRACTION (2.294 Å)
Cite:Narrow Groove and Restricted Anchors of MHC Class I Molecule BF2*0401 Plus Peptide Transporter Restriction Can Explain Disease Susceptibility of B4 Chickens.
J.Immunol., 189, 2012
4G43
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BU of 4g43 by Molmil
Structure of the chicken MHC class I molecule BF2*0401 complexed to P5E
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 8-MERIC PEPTIDE P5E, Beta-2 microglobulin, ...
Authors:Zhang, J, Chen, Y, Qi, J, Gao, F, Liu, J, Kaufman, J, Xia, C, Gao, G.F.
Deposit date:2012-07-16
Release date:2012-11-21
Method:X-RAY DIFFRACTION (1.803 Å)
Cite:Narrow Groove and Restricted Anchors of MHC Class I Molecule BF2*0401 Plus Peptide Transporter Restriction Can Explain Disease Susceptibility of B4 Chickens.
J.Immunol., 189, 2012
4E0R
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BU of 4e0r by Molmil
Structure of the chicken MHC class I molecule BF2*0401
Descriptor: 8-MERIC PEPTIDE (FUS/TLS), Beta-2 microglobulin, MHC class I alpha chain 2
Authors:Zhang, J, Chen, Y, Qi, J, Gao, F, Kaufman, J, Xia, C, Gao, G.F.
Deposit date:2012-03-05
Release date:2012-11-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Narrow Groove and Restricted Anchors of MHC Class I Molecule BF2*0401 Plus Peptide Transporter Restriction Can Explain Disease Susceptibility of B4 Chickens.
J.Immunol., 189, 2012
6T3Y
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BU of 6t3y by Molmil
Improved High Resolution Structure of MHC Class II complex
Descriptor: ACETATE ION, GLYCEROL, MHC class II alpha chain, ...
Authors:Halabi, S, Moncrieffe, M.C, Kaufman, J.
Deposit date:2019-10-11
Release date:2020-11-25
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The dominantly expressed class II molecule from a resistant MHC haplotype presents only a few Marek's disease virus peptides by using an unprecedented binding motif.
Plos Biol., 19, 2021
3BEW
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BU of 3bew by Molmil
10mer Crystal Structure of chicken MHC class I haplotype B21
Descriptor: 10-mer from Tubulin beta-6 chain, Beta-2-microglobulin, Major histocompatibility complex class I glycoprotein haplotype B21
Authors:Koch, M, Camp, S, Collen, T, Avila, D, Salomonsen, J, Wallny, H.J, van Hateren, A, Hunt, L, Jacob, J.P, Johnston, F, Marston, D.A, Shaw, I, Dunbar, P.R, Cerundolo, V, Jones, E.Y, Kaufman, J.
Deposit date:2007-11-20
Release date:2008-01-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structures of an MHC class I molecule from b21 chickens illustrate promiscuous Peptide binding
Immunity, 27, 2007
3BEV
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BU of 3bev by Molmil
11mer Structure of an MHC class I molecule from B21 chickens illustrate promiscuous peptide binding
Descriptor: Beta-2-microglobulin, Hemoglobin subunit alpha-A, Major histocompatibility complex class I glycoprotein haplotype B21
Authors:Koch, M, Kaufman, J, Jones, Y.
Deposit date:2007-11-20
Release date:2008-01-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structures of an MHC class I molecule from b21 chickens illustrate promiscuous Peptide binding
Immunity, 27, 2007
1QBZ
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BU of 1qbz by Molmil
THE CRYSTAL STRUCTURE OF THE SIV GP41 ECTODOMAIN AT 1.47 A
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, CHLORIDE ION, MERCURY (II) ION, ...
Authors:Yang, Z.-N, Mueser, T.C, Kaufman, J, Stahl, S.J, Wingfield, P.T, Hyde, C.C.
Deposit date:1999-04-28
Release date:1999-05-17
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:The crystal structure of the SIV gp41 ectodomain at 1.47 A resolution.
J.Struct.Biol., 126, 1999
2EZP
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BU of 2ezp by Molmil
SOLUTION NMR STRUCTURE OF ECTODOMAIN OF SIV GP41, MODELS 1-10 OF AN ENSEMBLE OF 40 SIMULATED ANNEALING STRUCTURES
Descriptor: GP41
Authors:Caffrey, M, Gronenborn, A.M, Clore, G.M.
Deposit date:1998-05-20
Release date:1998-10-14
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Three-dimensional solution structure of the 44 kDa ectodomain of SIV gp41.
EMBO J., 17, 1998
2YEZ
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BU of 2yez by Molmil
COMPLEX OF A B21 CHICKEN MHC CLASS I MOLECULE AND A 10MER CHICKEN PEPTIDE
Descriptor: 14-3-3 PROTEIN THETA, BETA-2-MICROGLOBULIN, MAJOR HISTOCOMPATIBILITY COMPLEX CLASS I GLYCOPROTEIN HAPLOTYPE B21
Authors:Chappell, P, Roversi, P, Harrison, M.C, Mears, L.E, Kaufman, J.F, Lea, S.M.
Deposit date:2011-03-31
Release date:2012-04-11
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Expression levels of MHC class I molecules are inversely correlated with promiscuity of peptide binding.
Elife, 4, 2015
1AVV
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BU of 1avv by Molmil
HIV-1 NEF PROTEIN, UNLIGANDED CORE DOMAIN
Descriptor: NEGATIVE FACTOR
Authors:Arold, S, Franken, P, Dumas, C.
Deposit date:1997-09-21
Release date:1998-03-25
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (3 Å)
Cite:The crystal structure of HIV-1 Nef protein bound to the Fyn kinase SH3 domain suggests a role for this complex in altered T cell receptor signaling.
Structure, 5, 1997
7WBI
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BU of 7wbi by Molmil
BF2*1901-FLU
Descriptor: Beta-2-microglobulin, ILE-ARG-HIS-GLU-ASN-ARG-MET-VAL-LEU, MHC class I alpha chain 2
Authors:Liu, W.J.
Deposit date:2021-12-16
Release date:2022-12-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A Wider and Deeper Peptide-Binding Groove for the Class I Molecules from B15 Compared with B19 Chickens Correlates with Relative Resistance to Marek's Disease.
J Immunol., 210, 2023
7WBG
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BU of 7wbg by Molmil
BF2*1901/RY8
Descriptor: ARG-ARG-ARG-GLU-GLN-THR-ASP-TYR, Beta-2-microglobulin, MHC class I alpha chain 2
Authors:Liu, W.J.
Deposit date:2021-12-16
Release date:2022-12-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:A Wider and Deeper Peptide-Binding Groove for the Class I Molecules from B15 Compared with B19 Chickens Correlates with Relative Resistance to Marek's Disease.
J Immunol., 210, 2023
2MIM
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BU of 2mim by Molmil
NMR structure of the chicken CD3 epsilon delta/gamma heterodimer
Descriptor: CD3 epsilon protein,CD3 glycoprotein
Authors:Headey, S, Berry, R, Rossjohn, J.
Deposit date:2013-12-15
Release date:2014-02-12
Last modified:2019-01-23
Method:SOLUTION NMR
Cite:Structure of the chicken CD3 epsilon delta / gamma heterodimer and its assembly with the alpha beta T cell receptor
J.Biol.Chem., 289, 2014
1AVZ
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BU of 1avz by Molmil
V-1 NEF PROTEIN IN COMPLEX WITH WILD TYPE FYN SH3 DOMAIN
Descriptor: FYN TYROSINE KINASE, NEGATIVE FACTOR
Authors:Arold, S, Franken, P, Dumas, C.
Deposit date:1997-09-23
Release date:1998-03-25
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (3 Å)
Cite:The crystal structure of HIV-1 Nef protein bound to the Fyn kinase SH3 domain suggests a role for this complex in altered T cell receptor signaling.
Structure, 5, 1997
2EZS
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BU of 2ezs by Molmil
SOLUTION NMR STRUCTURE OF ECTODOMAIN OF SIV GP41, MODELS 31-40 OF AN ENSEMBLE OF 40 SIMULATED ANNEALING STRUCTURES
Descriptor: GP41
Authors:Caffrey, M, Gronenborn, A.M, Clore, G.M.
Deposit date:1998-05-20
Release date:1998-10-14
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Three-dimensional solution structure of the 44 kDa ectodomain of SIV gp41.
EMBO J., 17, 1998
2EZR
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BU of 2ezr by Molmil
SOLUTION NMR STRUCTURE OF ECTODOMAIN OF SIV GP41, MODELS 21-30 OF AN ENSEMBLE OF 40 SIMULATED ANNEALING STRUCTURES
Descriptor: GP41
Authors:Caffrey, M, Gronenborn, A.M, Clore, G.M.
Deposit date:1998-05-20
Release date:1998-10-14
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Three-dimensional solution structure of the 44 kDa ectodomain of SIV gp41.
EMBO J., 17, 1998
2EZO
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BU of 2ezo by Molmil
SOLUTION NMR STRUCTURE OF ECTODOMAIN OF SIV GP41, RESTRAINED REGULARIZED MEAN STRUCTURE
Descriptor: GP41
Authors:Caffrey, M, Gronenborn, A.M, Clore, G.M.
Deposit date:1998-05-20
Release date:1998-10-14
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Three-dimensional solution structure of the 44 kDa ectodomain of SIV gp41.
EMBO J., 17, 1998
2EZQ
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BU of 2ezq by Molmil
SOLUTION NMR STRUCTURE OF ECTODOMAIN OF SIV GP41, MODELS 11-20 OF AN ENSEMBLE OF 40 SIMULATED ANNEALING STRUCTURES
Descriptor: GP41
Authors:Caffrey, M, Gronenborn, A.M, Clore, G.M.
Deposit date:1998-05-20
Release date:1998-10-14
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Three-dimensional solution structure of the 44 kDa ectodomain of SIV gp41.
EMBO J., 17, 1998
5YMV
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BU of 5ymv by Molmil
Crystal structure of 9-mer peptide from influenza virus in complex with BF2*1201
Descriptor: ALA-VAL-LYS-GLY-VAL-GLY-THR-MET-VAL, Beta-2-microglobulin, Class I histocompatibility antigen, ...
Authors:Xiao, J, Xiang, W, Qi, J, Chai, Y, Liu, W.J, Gao, G.F.
Deposit date:2017-10-22
Release date:2018-10-24
Last modified:2019-07-31
Method:X-RAY DIFFRACTION (2.197 Å)
Cite:An Invariant Arginine in Common with MHC Class II Allows Extension at the C-Terminal End of Peptides Bound to Chicken MHC Class I.
J Immunol., 201, 2018

 

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