Author results

3AMO
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TIME-RESOLVED X-RAY CRYSTAL STRUCTURE ANALYSIS OF ENZYMATIC REACTION OF COPPER AMINE OXIDASE FROM ARTHROBACTER GLOBIFORMIS
Descriptor:Phenylethylamine oxidase, COPPER (II) ION, SODIUM ION, ...
Authors:Kataoka, M., Oya, H., Tominaga, A., Otsu, M., Okajima, T., Tanizawa, K., Yamaguchi, H.
Deposit date:2010-08-20
Release date:2011-11-23
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Detection of the reaction intermediates catalyzed by a copper amine oxidase.
J.SYNCHROTRON RADIAT., 18, 2011
3WQ0
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STRUCTURE OF HYPERTHERMOPHILIC FAMILY 12 ENDOCELLULASE FROM PYROCOCCUS FURIOSUS IN COMPLEX WITH GLUCO-OLIGOSACCHARIDE
Descriptor:Endoglucanase A, CALCIUM ION, 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, ...
Authors:Kataoka, M., Ishikawa, K.
Deposit date:2014-01-21
Release date:2015-02-25
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Structure of hyperthermophilic family 12 endocellulase from Pyrococcus furiosus in complex with gluco-oligosaccharide
To be Published
3WQ1
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STRUCTURE OF HYPERTHERMOPHILIC FAMILY 12 ENDOCELLULASE FROM PYROCOCCUS FURIOSUS IN COMPLEX WITH CELLO-OLIGOSACCHARIDE
Descriptor:Endoglucanase A, CALCIUM ION, 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, ...
Authors:Kataoka, M., Ishikawa, K.
Deposit date:2014-01-21
Release date:2015-02-25
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structure of hyperthermophilic family 12 endocellulase from Pyrococcus furiosus in complex with cello-oligosaccharide
To be Published
3WQ7
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NEW CRYSTAL FORM OF THE HYPERTHERMOPHILIC FAMILY 12 ENDO-CELLULASE FROM PYROCOCCUS FURIOSUS
Descriptor:Endoglucanase A, CALCIUM ION, GLYCEROL
Authors:Kataoka, M., Ishikawa, K.
Deposit date:2014-01-23
Release date:2014-07-02
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:A new crystal form of a hyperthermophilic endocellulase.
Acta Crystallogr.,Sect.F, 70, 2014
3WR0
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STRUCTURE OF HYPERTHERMOPHILIC FAMILY 12 ENDOCELLULASE MUTANT FROM PYROCOCCUS FURIOSUS
Descriptor:Endoglucanase A, 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, CALCIUM ION, ...
Authors:Kataoka, M., Ishikawa, K.
Deposit date:2014-02-06
Release date:2015-03-11
Method:X-RAY DIFFRACTION (1.16 Å)
Cite:Structure of hyperthermophilic family 12 endocellulase mutant from Pyrococcus furiosus
To be Published
3WT3
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NEW CRYSTAL FORM OF A HYPERTHERMOPHILIC ENDOCELLULASE
Descriptor:Endoglucanase A, CALCIUM ION, GLYCEROL
Authors:Kataoka, M., Ishikawa, K.
Deposit date:2014-04-07
Release date:2015-04-29
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:A new crystal form of a hyperthermophilic endocellulase
To be Published
3WXP
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STRUCTURE OF HYPERTHERMOPHILIC FAMILY 12 ENDOCELLULASE (E197A) FROM PYROCOCCUS FURIOSUS IN COMPLEX WITH CELLOBIOSE
Descriptor:Endoglucanase A, CALCIUM ION, 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, ...
Authors:Kataoka, M., Ishikawa, K.
Deposit date:2014-08-04
Release date:2015-11-18
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Structure of hyperthermophilic family 12 endocellulase mutant (E197A) from Pyrococcus furiosus in complex with cellobiose
To be Published
3WY6
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STRUCTURE OF HYPERTHERMOPHILIC FAMILY 12 ENDOCELLULASE (E197A) FROM PYROCOCCUS FURIOSUS IN COMPLEX WITH LAMINARIBIOSE
Descriptor:Endoglucanase A, CALCIUM ION, 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, ...
Authors:Kataoka, M., Ishikawa, K.
Deposit date:2014-08-20
Release date:2015-09-16
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structure of hyperthermophilic family 12 endocellulase (E197A) from Pyrococcus furiosus in complex with laminaribiose
To be Published
3VGI
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THE CRYSTAL STRUCTURE OF HYPERTHERMOPHILIC FAMILY 12 ENDOCELLULASE FROM PYROCOCCUS FURIOSUS
Descriptor:Endoglucanase A, CALCIUM ION, 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, ...
Authors:Kataoka, M., Kim, H.-W., Ishikawa, K.
Deposit date:2011-08-11
Release date:2012-09-12
Method:X-RAY DIFFRACTION (1.07 Å)
Cite:Atomic resolution of the crystal structure of the hyperthermophilic family 12 endocellulase and stabilizing role of the DxDxDG calcium-binding motif in Pyrococcus furiosus.
Febs Lett., 586, 2012
3WP3
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XYLANASE 11C FROM TALAROMYCES CELLULOLYTICUS (FORMERLY KNOWN AS ACREMONIUM CELLULOLYTICUS)
Descriptor:Endo-1,4-beta-xylanase
Authors:Ishikawa, K., Inoue, H., Kataoka, M.
Deposit date:2014-01-09
Release date:2014-11-26
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Crystal structure of Talaromyces cellulolyticus (formerly known as Acremonium cellulolyticus) GH family 11 xylanase
Appl Biochem Biotechnol., 174, 2014
5B36
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CRYSTAL STRUCTURE OF THE O-PHOSPHOSERINE SULFHYDRYLASE FROM AEROPYRUM PERNIX COMPLEXED WITH CYSTEINE
Descriptor:Protein CysO, PYRIDOXAL-5'-PHOSPHATE, CYSTEINE, ...
Authors:Nakamura, T., Takeda, E., Kawai, Y., Kataoka, M., Ishikawa, K.
Deposit date:2016-02-10
Release date:2016-03-16
Last modified:2016-09-07
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Role of F225 in O-phosphoserine sulfhydrylase from Aeropyrum pernix K1
Extremophiles, 20, 2016
5B3A
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CRYSTAL STRUCTURE OF O-PHOSHOSERINE SULFHYDRYLASE FROM AEROPYRUM PERNIX IN COMPLEXED WITH THE ALPHA-AMINOACRYLATE INTERMEDIATE
Descriptor:Protein CysO, (4S)-2-METHYL-2,4-PENTANEDIOL, 2-{[(E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}prop-2-enoic acid
Authors:Nakamura, T., Takeda, E., Kawai, Y., Kataoka, M., Ishikawa, K.
Deposit date:2016-02-12
Release date:2016-03-16
Last modified:2017-05-10
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Role of F225 in O-phosphoserine sulfhydrylase from Aeropyrum pernix K1
Extremophiles, 20, 2016
2ZAM
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CRYSTAL STRUCTURE OF MOUSE SKD1/VPS4B APO-FORM
Descriptor:Vacuolar protein sorting-associating protein 4B
Authors:Inoue, M., Kawasaki, M., Kamikubo, H., Kataoka, M., Kato, R., Yoshimori, T., Wakatsuki, S.
Deposit date:2007-10-08
Release date:2008-10-07
Last modified:2014-01-22
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Nucleotide-dependent conformational changes and assembly of the AAA ATPase SKD1/VPS4B
Traffic, 9, 2008
2ZAN
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CRYSTAL STRUCTURE OF MOUSE SKD1/VPS4B ATP-FORM
Descriptor:Vacuolar protein sorting-associating protein 4B, MAGNESIUM ION, ADENOSINE-5'-TRIPHOSPHATE
Authors:Inoue, M., Kawasaki, M., Kamikubo, H., Kataoka, M., Kato, R., Yoshimori, T., Wakatsuki, S.
Deposit date:2007-10-08
Release date:2008-10-07
Last modified:2014-01-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Nucleotide-dependent conformational changes and assembly of the AAA ATPase SKD1/VPS4B
Traffic, 9, 2008
2ZAO
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CRYSTAL STRUCTURE OF MOUSE SKD1/VPS4B ADP-FORM
Descriptor:Vacuolar protein sorting-associating protein 4B, ADENOSINE-5'-DIPHOSPHATE
Authors:Inoue, M., Kawasaki, M., Kamikubo, H., Kataoka, M., Kato, R., Yoshimori, T., Wakatsuki, S.
Deposit date:2007-10-08
Release date:2008-10-07
Last modified:2014-01-22
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Nucleotide-dependent conformational changes and assembly of the AAA ATPase SKD1/VPS4B
Traffic, 9, 2008
3WGB
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CRYSTAL STRUCTURE OF AEROMONAS JANDAEI L-ALLO-THREONINE ALDOLASE
Descriptor:L-allo-threonine aldolase, N-GLYCINE-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YL-METHANE], GLYCINE
Authors:Qin, H.M., Imai, F.L., Miyakawa, T., Kataoka, M., Okai, M., Ohtsuka, J., Hou, F., Nagata, K., Shimizu, S., Tanokura, M.
Deposit date:2013-08-03
Release date:2014-07-09
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:L-allo-Threonine aldolase with an H128Y/S292R mutation from Aeromonas jandaei DK-39 reveals the structural basis of changes in substrate stereoselectivity.
Acta Crystallogr.,Sect.D, 70, 2014
3WGC
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AEROMONAS JANDAEI L-ALLO-THREONINE ALDOLASE H128Y/S292R DOUBLE MUTANT
Descriptor:L-allo-threonine aldolase, N-GLYCINE-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YL-METHANE]
Authors:Qin, H.M., Imai, F.L., Miyakawa, T., Kataoka, M., Okai, M., Ohtsuka, J., Hou, F., Nagata, K., Shimizu, S., Tanokura, M.
Deposit date:2013-08-03
Release date:2014-07-09
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:L-allo-Threonine aldolase with an H128Y/S292R mutation from Aeromonas jandaei DK-39 reveals the structural basis of changes in substrate stereoselectivity.
Acta Crystallogr.,Sect.D, 70, 2014
3WLX
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CRYSTAL STRUCTURE OF LOW-SPECIFICITY L-THREONINE ALDOLASE FROM ESCHERICHIA COLI
Descriptor:Low specificity L-threonine aldolase, N-GLYCINE-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YL-METHANE]
Authors:Qin, H.-M., Imai, F.L., Miyakawa, T., Kataoka, M., Okai, M., Hou, F., Ohtsuka, J., Nagata, K., Shimizu, S., Tanokura, M.
Deposit date:2013-11-15
Release date:2014-12-17
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Structure analysis of L-threonine aldolase from Escherichia coli unravels the low-specificity and thermostability
To be Published
3WQ8
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MONOMER STRUCTURE OF HYPERTHERMOPHILIC BETA-GLUCOSIDASE MUTANT FORMING A DODECAMERIC STRUCTURE IN THE CRYSTAL FORM
Descriptor:Beta-glucosidase
Authors:Nakabayashi, M., Kataoka, M., Watanabe, M., Ishikawa, K.
Deposit date:2014-01-23
Release date:2014-07-09
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Monomer structure of a hyperthermophilic [beta]-glucosidase mutant forming a dodecameric structure in the crystal form
Acta Crystallogr.,Sect.F, 70, 2014
4YPJ
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X-RAY STRUCTURE OF THE MUTANT OF GLYCOSIDE HYDROLASE
Descriptor:Beta galactosidase
Authors:Ishikawa, K., Kataoka, M., Yanamoto, T., Nakabayashi, M., Watanabe, M.
Deposit date:2015-03-13
Release date:2015-04-29
Last modified:2017-05-31
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of beta-galactosidase from Bacillus circulans ATCC 31382 (BgaD) and the construction of the thermophilic mutants.
Febs J., 282, 2015
1D8L
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E. COLI HOLLIDAY JUNCTION BINDING PROTEIN RUVA NH2 REGION LACKING DOMAIN III
Descriptor:PROTEIN (HOLLIDAY JUNCTION DNA HELICASE RUVA)
Authors:Nishino, T., Iwasaki, H., Kataoka, M., Ariyoshi, M., Fujita, T., Shinagawa, H., Morikawa, K.
Deposit date:1999-10-25
Release date:2000-05-03
Last modified:2018-04-04
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Modulation of RuvB function by the mobile domain III of the Holliday junction recognition protein RuvA.
J.Mol.Biol., 298, 2000
1V4R
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SOLUTION STRUCTURE OF STREPTMYCAL REPRESSOR TRAR
Descriptor:Transcriptional Repressor
Authors:Tanaka, T., Komatsu, C., Kobayashi, K., Sugai, M., Kataoka, M., Kohno, T.
Deposit date:2003-11-17
Release date:2005-03-01
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of Streptmycal repressor TraR
TO BE PUBLISHED
2IEY
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CRYSTAL STRUCTURE OF MOUSE RAB27B BOUND TO GDP IN HEXAGONAL SPACE GROUP
Descriptor:Ras-related protein Rab-27B, GUANOSINE-5'-DIPHOSPHATE
Authors:Chavas, L.M.G., Torii, S., Kamikubo, H., Kawasaki, M., Ihara, K., Kato, R., Kataoka, M., Izumi, T., Wakatsuki, S.
Deposit date:2006-09-19
Release date:2007-05-01
Last modified:2012-04-11
Method:X-RAY DIFFRACTION (3.18 Å)
Cite:Structure of the small GTPase Rab27b shows an unexpected swapped dimer
Acta Crystallogr.,Sect.D, 63, 2007
2IEZ
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CRYSTAL STRUCTURE OF MOUSE RAB27B BOUND TO GDP IN MONOCLINIC SPACE GROUP
Descriptor:Ras-related protein Rab-27B, CALCIUM ION, GUANOSINE-5'-DIPHOSPHATE
Authors:Chavas, L.M.G., Torii, S., Kamikubo, H., Kawasaki, M., Ihara, K., Kato, R., Kataoka, M., Izumi, T., Wakatsuki, S.
Deposit date:2006-09-19
Release date:2007-05-01
Last modified:2012-04-11
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of the small GTPase Rab27b shows an unexpected swapped dimer
Acta Crystallogr.,Sect.D, 63, 2007
2IF0
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CRYSTAL STRUCTURE OF MOUSE RAB27B BOUND TO GDP IN MONOCLINIC SPACE GROUP
Descriptor:Ras-related protein Rab-27B, MAGNESIUM ION, GUANOSINE-5'-DIPHOSPHATE
Authors:Chavas, L.M.G., Torii, S., Kamikubo, H., Kawasaki, M., Ihara, K., Kato, R., Kataoka, M., Izumi, T., Wakatsuki, S.
Deposit date:2006-09-19
Release date:2007-05-01
Last modified:2012-04-11
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of the small GTPase Rab27b shows an unexpected swapped dimer
Acta Crystallogr.,Sect.D, 63, 2007
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