Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7PQ5
DownloadVisualize
BU of 7pq5 by Molmil
Photorhabdus laumondii T6SS-associated Rhs protein carrying the Tre23 toxin domain
Descriptor: Tre23
Authors:Jurenas, D, Talachia Rosa, L, Rey, M, Chamot-Rooke, J, Fronzes, R, Cascales, E.
Deposit date:2021-09-16
Release date:2021-12-01
Last modified:2022-03-02
Method:ELECTRON MICROSCOPY (3.17 Å)
Cite:Mounting, structure and autocleavage of a type VI secretion-associated Rhs polymorphic toxin.
Nat Commun, 12, 2021
7ZHL
DownloadVisualize
BU of 7zhl by Molmil
Salmonella enterica Rhs1 C-terminal toxin TreTu
Descriptor: RHS repeat protein, ZINC ION
Authors:Jurenas, D, Rey, M, Chamot-Rooke, J, Terradot, L, Cascales, E.
Deposit date:2022-04-06
Release date:2022-11-23
Last modified:2023-01-18
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Salmonella antibacterial Rhs polymorphic toxin inhibits translation through ADP-ribosylation of EF-Tu P-loop.
Nucleic Acids Res., 50, 2022
7ZHM
DownloadVisualize
BU of 7zhm by Molmil
Salmonella enterica Rhs1 C-terminal toxin TreTu complex with TriTu immunity protein
Descriptor: Immunity protein TriTu, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Rhs1 protein, ...
Authors:Jurenas, D, Rey, M, Chamot-Rooke, J, Terradot, L, Cascales, E.
Deposit date:2022-04-06
Release date:2022-11-23
Last modified:2023-01-18
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Salmonella antibacterial Rhs polymorphic toxin inhibits translation through ADP-ribosylation of EF-Tu P-loop.
Nucleic Acids Res., 50, 2022
6GTO
DownloadVisualize
BU of 6gto by Molmil
Structure of the AtaR antitoxin
Descriptor: DUF1778 domain-containing protein, SODIUM ION
Authors:Garcia-Pino, A, Jurenas, D.
Deposit date:2018-06-18
Release date:2019-03-06
Method:X-RAY DIFFRACTION (2.97 Å)
Cite:Mechanism of regulation and neutralization of the AtaR-AtaT toxin-antitoxin system.
Nat. Chem. Biol., 15, 2019
6GTS
DownloadVisualize
BU of 6gts by Molmil
Structure of the AtaT-AtaR complex bound DNA
Descriptor: Acetyltransferase, DNA, DUF1778 domain-containing protein
Authors:Garcia-Pino, A, Jurenas, D.
Deposit date:2018-06-19
Release date:2019-03-06
Method:X-RAY DIFFRACTION (3.357 Å)
Cite:Mechanism of regulation and neutralization of the AtaR-AtaT toxin-antitoxin system.
Nat. Chem. Biol., 15, 2019
6GTQ
DownloadVisualize
BU of 6gtq by Molmil
Structure of the AtaT Y144F mutant toxin bound to the C-terminus of the antitoxin AtaR
Descriptor: ACETATE ION, CHLORIDE ION, CITRATE ANION, ...
Authors:Garcia-Pino, A, Jurenas, D.
Deposit date:2018-06-18
Release date:2019-03-06
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Mechanism of regulation and neutralization of the AtaR-AtaT toxin-antitoxin system.
Nat. Chem. Biol., 15, 2019
6GTR
DownloadVisualize
BU of 6gtr by Molmil
Structure of the AtaT Y144F mutant toxin bound to the C-terminus of the antitoxin AtaR and Acetyl-CoA
Descriptor: ACETYL COENZYME *A, DUF1778 domain-containing protein, GLYCEROL, ...
Authors:Garcia-Pino, A, Jurenas, D.
Deposit date:2018-06-18
Release date:2019-03-06
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:Mechanism of regulation and neutralization of the AtaR-AtaT toxin-antitoxin system.
Nat. Chem. Biol., 15, 2019
6GTP
DownloadVisualize
BU of 6gtp by Molmil
Structure of the AtaT Y144F mutant toxin
Descriptor: ACETYL COENZYME *A, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Garcia-Pino, A, Jurenas, D.
Deposit date:2018-06-18
Release date:2019-03-06
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Mechanism of regulation and neutralization of the AtaR-AtaT toxin-antitoxin system.
Nat. Chem. Biol., 15, 2019
5MI8
DownloadVisualize
BU of 5mi8 by Molmil
Structure of the phosphomimetic mutant of EF-Tu T383E
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACETATE ION, BETA-MERCAPTOETHANOL, ...
Authors:Talavera, A, Hendrix, J, Versees, W, De Gieter, S, Castro-Roa, D, Jurenas, D, Van Nerom, K, Vandenberk, N, Barth, A, De Greve, H, Hofkens, J, Zenkin, N, Loris, R, Garcia-Pino, A.
Deposit date:2016-11-27
Release date:2017-12-20
Last modified:2019-10-16
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Phosphorylation decelerates conformational dynamics in bacterial translation elongation factors.
Sci Adv, 4, 2018
5MI9
DownloadVisualize
BU of 5mi9 by Molmil
Structure of the phosphomimetic mutant of the elongation factor EF-Tu T62E
Descriptor: Elongation factor Tu 1, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
Authors:Talavera, A, Hendrix, J, Versees, W, De Gieter, S, Castro-Roa, D, Jurenas, D, Van Nerom, K, Vandenberk, N, Barth, A, De Greve, H, Hofkens, J, Zenkin, N, Loris, R, Garcia-Pino, A.
Deposit date:2016-11-27
Release date:2017-12-20
Last modified:2019-10-16
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Phosphorylation decelerates conformational dynamics in bacterial translation elongation factors.
Sci Adv, 4, 2018
5MI3
DownloadVisualize
BU of 5mi3 by Molmil
Structure of phosphorylated translation elongation factor EF-Tu from E. coli
Descriptor: Elongation factor Tu 1, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
Authors:Talavera, A, Hendrix, J, Versees, W, De Gieter, S, Castro-Roa, D, Jurenas, D, Van Nerom, K, Vandenberk, N, Barth, A, De Greve, H, Hofkens, J, Zenkin, N, Loris, R, Garcia-Pino, A.
Deposit date:2016-11-27
Release date:2017-12-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Phosphorylation decelerates conformational dynamics in bacterial translation elongation factors.
Sci Adv, 4, 2018
8A9O
DownloadVisualize
BU of 8a9o by Molmil
Structure of the polyamine acetyltransferase DpA
Descriptor: ACETYL COENZYME *A, BROMIDE ION, COENZYME A, ...
Authors:Garcia-Pino, A, Jurenas, D.
Deposit date:2022-06-28
Release date:2023-07-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.587 Å)
Cite:A polyamine acetyltransferase regulates the motility and biofilm formation of Acinetobacter baumannii.
Nat Commun, 14, 2023
8A9N
DownloadVisualize
BU of 8a9n by Molmil
Structure of DpA polyamine acetyltransferase in complex with 1,3-DAP
Descriptor: 1,3-DIAMINOPROPANE, Acetyltransferase, COENZYME A, ...
Authors:Garcia-Pino, A, Jurenas, D.
Deposit date:2022-06-28
Release date:2023-07-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.854 Å)
Cite:A polyamine acetyltransferase regulates the motility and biofilm formation of Acinetobacter baumannii.
Nat Commun, 14, 2023
6HPB
DownloadVisualize
BU of 6hpb by Molmil
Crystal structure of the E.coli HicAB toxin-antitoxin complex
Descriptor: Antitoxin HicB, SULFATE ION, mRNA interferase toxin HicA
Authors:Manav, M.C, Brodersen, D.E.
Deposit date:2018-09-20
Release date:2019-09-18
Last modified:2019-11-13
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:The E. coli HicB Antitoxin Contains a Structurally Stable Helix-Turn-Helix DNA Binding Domain.
Structure, 27, 2019
5J9I
DownloadVisualize
BU of 5j9i by Molmil
Crystal structure of the HigA2 antitoxin C-terminal domain
Descriptor: Antitoxin igA-2
Authors:Hadzi, S, Loris, R.
Deposit date:2016-04-10
Release date:2017-04-05
Last modified:2017-05-17
Method:X-RAY DIFFRACTION (1.797 Å)
Cite:Ribosome-dependent Vibrio cholerae mRNAse HigB2 is regulated by a beta-strand sliding mechanism.
Nucleic Acids Res., 45, 2017
5JA9
DownloadVisualize
BU of 5ja9 by Molmil
Crystal structure of the HigB2 toxin in complex with Nb6
Descriptor: 1,2-ETHANEDIOL, Nanobody 6, SULFATE ION, ...
Authors:Hadzi, S, Loris, R.
Deposit date:2016-04-12
Release date:2017-04-05
Last modified:2017-05-17
Method:X-RAY DIFFRACTION (1.849 Å)
Cite:Ribosome-dependent Vibrio cholerae mRNAse HigB2 is regulated by a beta-strand sliding mechanism.
Nucleic Acids Res., 45, 2017
5JAA
DownloadVisualize
BU of 5jaa by Molmil
Crystal structure of the HigBA2 toxin-antitoxin complex
Descriptor: Antitoxin igA-2, Toxin HigB-2
Authors:Hadzi, S, Loris, R.
Deposit date:2016-04-12
Release date:2017-04-05
Last modified:2017-05-17
Method:X-RAY DIFFRACTION (2.993 Å)
Cite:Ribosome-dependent Vibrio cholerae mRNAse HigB2 is regulated by a beta-strand sliding mechanism.
Nucleic Acids Res., 45, 2017
5JA8
DownloadVisualize
BU of 5ja8 by Molmil
Crystal structure of the HigB2 toxin in complex with Nb2
Descriptor: 1,2-ETHANEDIOL, 1,3-PROPANDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Hadzi, S, Loris, R.
Deposit date:2016-04-12
Release date:2017-04-05
Last modified:2019-02-20
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Ribosome-dependent Vibrio cholerae mRNAse HigB2 is regulated by a beta-strand sliding mechanism.
Nucleic Acids Res., 45, 2017
5MJE
DownloadVisualize
BU of 5mje by Molmil
Crystal structure of the HigB2 toxin in complex with Nb8
Descriptor: Cytotoxic translational repressor of toxin-antitoxin stability system, DI(HYDROXYETHYL)ETHER, Nanobody 8, ...
Authors:Hadzi, S, Loris, R.
Deposit date:2016-11-30
Release date:2017-04-05
Last modified:2019-10-16
Method:X-RAY DIFFRACTION (2.599 Å)
Cite:Ribosome-dependent Vibrio cholerae mRNAse HigB2 is regulated by a beta-strand sliding mechanism.
Nucleic Acids Res., 45, 2017
8BT1
DownloadVisualize
BU of 8bt1 by Molmil
YdaT transcription regulator (CII functional analog)
Descriptor: CHLORIDE ION, GLYCEROL, SULFATE ION, ...
Authors:Prolic-Kalinsek, M, Loris, R.
Deposit date:2022-11-27
Release date:2023-02-22
Last modified:2023-03-22
Method:X-RAY DIFFRACTION (2.39788437 Å)
Cite:Structural basis of DNA binding by YdaT, a functional equivalent of the CII repressor in the cryptic prophage CP-933P from Escherichia coli O157:H7.
Acta Crystallogr D Struct Biol, 79, 2023
6HPC
DownloadVisualize
BU of 6hpc by Molmil
Crystal structure of the HicB antitoxin from E. coli
Descriptor: Antitoxin HicB
Authors:Manav, M.C, Brodersen, D.E.
Deposit date:2018-09-20
Release date:2019-09-18
Last modified:2019-11-13
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:The E. coli HicB Antitoxin Contains a Structurally Stable Helix-Turn-Helix DNA Binding Domain.
Structure, 27, 2019
8C7K
DownloadVisualize
BU of 8c7k by Molmil
YdaS from E. coli O157:H7 cryptic prophage CP-933P
Descriptor: Phage antirepressor protein Cro
Authors:Prolic-Kalinsek, M, Volkov, A.N, Loris, R.
Deposit date:2023-01-16
Release date:2023-01-25
Last modified:2023-03-22
Method:SOLUTION NMR
Cite:Structural basis of DNA binding by YdaT, a functional equivalent of the CII repressor in the cryptic prophage CP-933P from Escherichia coli O157:H7.
Acta Crystallogr D Struct Biol, 79, 2023

218500

PDB entries from 2024-04-17

PDB statisticsPDBj update infoContact PDBjnumon