Author results

1AM0
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AMP RNA APTAMER COMPLEX, NMR, 8 STRUCTURES
Descriptor:RNA APTAMER, ADENOSINE MONOPHOSPHATE
Authors:Jiang, F., Kumar, R.A., Jones, R.A., Patel, D.J.
Deposit date:1997-06-19
Release date:1997-07-23
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structural Basis of RNA Folding and Recognition in an AMP-RNA Aptamer Complex
Nature, 382, 1996
5K3G
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CRYSTALS STRUCTURE OF ACYL-COA OXIDASE-1 IN CAENORHABDITIS ELEGANS, APO FORM-I
Descriptor:Acyl-coenzyme A oxidase
Authors:Zhang, X., Li, K., Jones, R.A., Bruner, S.D., Butcher, R.A.
Deposit date:2016-05-19
Release date:2016-08-24
Last modified:2017-09-27
Method:X-RAY DIFFRACTION (2.859 Å)
Cite:Structural characterization of acyl-CoA oxidases reveals a direct link between pheromone biosynthesis and metabolic state in Caenorhabditis elegans.
Proc.Natl.Acad.Sci.USA, 113, 2016
5K3H
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CRYSTALS STRUCTURE OF ACYL-COA OXIDASE-1 IN CAENORHABDITIS ELEGANS, APO FORM-II
Descriptor:Acyl-coenzyme A oxidase
Authors:Zhang, X., Li, K., Jones, R.A., Bruner, S.D., Butcher, R.A.
Deposit date:2016-05-19
Release date:2016-08-24
Last modified:2017-09-27
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Structural characterization of acyl-CoA oxidases reveals a direct link between pheromone biosynthesis and metabolic state in Caenorhabditis elegans.
Proc.Natl.Acad.Sci.USA, 113, 2016
5K3I
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CRYSTAL STRUCTURE OF ACYL-COA OXIDASE-1 IN CAENORHABDITIS ELEGANS COMPLEXED WITH FAD AND ATP
Descriptor:Acyl-coenzyme A oxidase, FLAVIN-ADENINE DINUCLEOTIDE, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Zhang, X., Li, K., Jones, R.A., Bruner, S.D., Butcher, R.A.
Deposit date:2016-05-19
Release date:2016-08-24
Last modified:2017-09-27
Method:X-RAY DIFFRACTION (2.683 Å)
Cite:Structural characterization of acyl-CoA oxidases reveals a direct link between pheromone biosynthesis and metabolic state in Caenorhabditis elegans.
Proc.Natl.Acad.Sci.USA, 113, 2016
5K3J
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CRYSTALS STRUCTURE OF ACYL-COA OXIDASE-2 IN CAENORHABDITIS ELEGANS BOUND WITH FAD, ASCAROSIDE-COA, AND ATP
Descriptor:Acyl-coenzyme A oxidase, FLAVIN-ADENINE DINUCLEOTIDE, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Zhang, X., Li, K., Jones, R.A., Bruner, S.D., Butcher, R.A.
Deposit date:2016-05-19
Release date:2016-08-24
Last modified:2017-09-27
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Structural characterization of acyl-CoA oxidases reveals a direct link between pheromone biosynthesis and metabolic state in Caenorhabditis elegans.
Proc.Natl.Acad.Sci.USA, 113, 2016
1AFF
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DNA QUADRUPLEX CONTAINING GGGG TETRADS AND (T.A).A TRIADS, NMR, 8 STRUCTURES
Descriptor:QUADRUPLEX DNA (5'-D(TP*AP*GP*G)-3')
Authors:Kettani, A., Bouaziz, S., Wang, W., Jones, R.A., Patel, D.J.
Deposit date:1997-03-06
Release date:1997-08-20
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Bombyx mori single repeat telomeric DNA sequence forms a G-quadruplex capped by base triads.
Nat.Struct.Biol., 4, 1997
1B3P
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5'-D(*GP*GP*AP*GP*GP*AP*T)-3'
Descriptor:DNA (5'-D(*GP*GP*AP*GP*GP*AP*T)-3')
Authors:Kettani, A., Bouaziz, S., Skripkin, E., Majumdar, A., Wang, W., Jones, R.A., Patel, D.J.
Deposit date:1998-12-14
Release date:1999-08-31
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Interlocked mismatch-aligned arrowhead DNA motifs.
Structure Fold.Des., 7, 1999
1D24
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CRYSTAL AND MOLECULAR STRUCTURE OF A DNA DUPLEX CONTAINING THE CARCINOGENIC LESION O6-METHYLGUANINE
Descriptor:DNA (5'-D(*CP*GP*CP*(6OG)P*CP*G)-3')
Authors:Ginell, S.L., Kuzmich, S., Jones, R.A., Berman, H.M.
Deposit date:1990-08-29
Release date:1992-04-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal and molecular structure of a DNA duplex containing the carcinogenic lesion O6-methylguanine.
Biochemistry, 29, 1990
1XAV
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MAJOR G-QUADRUPLEX STRUCTURE FORMED IN HUMAN C-MYC PROMOTER, A MONOMERIC PARALLEL-STRANDED QUADRUPLEX
Descriptor:5'-D(*TP*GP*AP*GP*GP*GP*TP*GP*GP*GP*TP*AP*GP*GP*GP*TP*GP*GP*GP*TP*AP*A)-3', POTASSIUM ION
Authors:Ambrus, A., Chen, D., Dai, J., Jones, R.A., Yang, D.
Deposit date:2004-08-26
Release date:2005-02-01
Last modified:2014-09-17
Method:SOLUTION NMR
Cite:Solution structure of the biologically relevant G-Quadruplex element in the human c-MYC promoter. Implications for G-quadruplex stabilization.
Biochemistry, 44, 2005
2ARG
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FORMATION OF AN AMINO ACID BINDING POCKET THROUGH ADAPTIVE ZIPPERING-UP OF A LARGE DNA HAIRPIN LOOP, NMR, 9 STRUCTURES
Descriptor:DNA APTAMER [5'-D (*TP*GP*AP*CP*CP*AP*GP*GP*GP*CP*AP*AP*AP*CP*GP*GP*TP*AP* GP*GP*TP*GP*AP*GP*TP*GP*GP*TP*CP*A)-3'], DEOXY-METHYL-ARGININE
Authors:Lin, C.H., Wang, W., Jones, R.A., Patel, D.J.
Deposit date:1998-08-19
Release date:1999-03-23
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Formation of an amino-acid-binding pocket through adaptive zippering-up of a large DNA hairpin loop.
Chem.Biol., 5, 1998
2HY9
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HUMAN TELOMERE DNA QUADRUPLEX STRUCTURE IN K+ SOLUTION HYBRID-1 FORM
Descriptor:DNA (26-MER)
Authors:Dai, J., Punchihewa, C., Jones, R.A., Hurley, L., Yang, D.
Deposit date:2006-08-04
Release date:2007-04-10
Last modified:2014-09-17
Method:SOLUTION NMR
Cite:Structure of the intramolecular human telomeric G-quadruplex in potassium solution: a novel adenine triple formation.
Nucleic Acids Res., 35, 2007
3JSM
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K65R MUTANT HIV-1 REVERSE TRANSCRIPTASE CROSS-LINKED TO DS-DNA AND COMPLEXED WITH TENOFOVIR-DIPHOSPHATE AS THE INCOMING NUCLEOTIDE SUBSTRATE
Descriptor:DNA (5'-D(*A*TP*GP*GP*TP*CP*GP*GP*CP*GP*CP*CP*CP*GP*AP*AP*CP*AP*GP*GP*GP*AP*CP*TP*GP*TP*G)-3'), DNA (5'-D(*A*CP*AP*GP*TP*CP*CP*CP*TP*GP*TP*TP*CP*GP*GP*(MRG)P*CP*GP*CP*CP*(DDG))-3'), HIV-1 REVERSE TRANSCRIPTASE P66 SUBUNIT, ...
Authors:Das, K., Arnold, E.
Deposit date:2009-09-10
Release date:2009-09-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis for the role of the K65r mutation in HIV-1 reverse transcriptase polymerization, excision antagonism, and tenofovir resistance.
J.Biol.Chem., 284, 2009
3JYT
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K65R MUTANT HIV-1 REVERSE TRANSCRIPTASE CROSS-LINKED TO DS-DNA AND COMPLEXED WITH DATP AS THE INCOMING NUCLEOTIDE SUBSTRATE
Descriptor:HIV-1 REVERSE TRANSCRIPTASE P66 SUBUNIT, HIV-1 REVERSE TRANSCRIPTASE P51 SUBUNIT, DNA (5'-D(*A*TP*GP*GP*TP*CP*GP*GP*CP*GP*CP*CP*CP*GP*AP*AP*CP*AP*GP*GP*GP*AP*CP*TP*GP*TP*G)-3'), ...
Authors:Das, K., Arnold, E.
Deposit date:2009-09-22
Release date:2009-10-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structural basis for the role of the K65r mutation in HIV-1 reverse transcriptase polymerization, excision antagonism, and tenofovir resistance.
J.Biol.Chem., 284, 2009
1A8N
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SOLUTION STRUCTURE OF A NA+ CATION STABILIZED DNA QUADRUPLEX CONTAINING G.G.G.G AND G.C.G.C TETRADS FORMED BY G-G-G-C REPEATS OBSERVED IN AAV AND HUMAN CHROMOSOME 19, NMR, 8 STRUCTURES
Descriptor:DNA QUADRUPLEX CONTAINING G.G.G.G AND G.C.G.C TETRADS
Authors:Kettani, A., Bouaziz, S., Gorin, A., Zhao, H., Jones, R., Patel, D.J.
Deposit date:1998-03-27
Release date:1998-10-14
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of a Na cation stabilized DNA quadruplex containing G.G.G.G and G.C.G.C tetrads formed by G-G-G-C repeats observed in adeno-associated viral DNA.
J.Mol.Biol., 282, 1998
2JPZ
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HUMAN TELOMERE DNA QUADRUPLEX STRUCTURE IN K+ SOLUTION HYBRID-2 FORM
Descriptor:DNA (26-MER)
Authors:Dai, J., Carver, M., Punchihewa, C., Jones, R., Yang, D.
Deposit date:2007-05-25
Release date:2007-12-04
Last modified:2014-10-01
Method:SOLUTION NMR
Cite:Structure of the Hybrid-2 type intramolecular human telomeric G-quadruplex in K+ solution: insights into structure polymorphism of the human telomeric sequence
Nucleic Acids Res., 35, 2007
3V81
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CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) WITH DNA AND THE NONNUCLEOSIDE INHIBITOR NEVIRAPINE
Descriptor:HIV-1 Reverse Transcriptase P66 subunit, HIV-1 Reverse Transcriptase P51 subunit, DNA (5'-D(*AP*TP*GP*GP*AP*AP*GP*GP*CP*GP*CP*CP*CP*GP*AP*AP*CP*AP*GP*GP*GP*AP*CP*TP*GP*TP*G)-3'), ...
Authors:Das, K., Martinez, S.E., Arnold, E.
Deposit date:2011-12-22
Release date:2012-01-18
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.8503 Å)
Cite:HIV-1 reverse transcriptase complex with DNA and nevirapine reveals non-nucleoside inhibition mechanism.
Nat.Struct.Mol.Biol., 19, 2012
1T03
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HIV-1 REVERSE TRANSCRIPTASE CROSSLINKED TO TENOFOVIR TERMINATED TEMPLATE-PRIMER (COMPLEX P)
Descriptor:Synthetic oligonucleotide template, Synthetic oligonucleotide primer, POL polyprotein, ...
Authors:Tuske, S., Sarafianos, S.G., Ding, J., Arnold, E.
Deposit date:2004-04-07
Release date:2004-05-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure of HIV-1 RT-DNA complexes before and after incorporation of the anti-AIDS drug tenofovir
Nat.Struct.Mol.Biol., 11, 2004
1T05
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HIV-1 REVERSE TRANSCRIPTASE CROSSLINKED TO TEMPLATE-PRIMER WITH TENOFOVIR-DIPHOSPHATE BOUND AS THE INCOMING NUCLEOTIDE SUBSTRATE
Descriptor:oligonucleotide template, oligonucleotide primer, POL polyprotein, ...
Authors:Tuske, S., Sarafianos, S.G., Ding, J., Arnold, E.
Deposit date:2004-04-07
Release date:2004-05-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structures of HIV-1 RT-DNA complexes before and after incorporation of the anti-AIDS drug tenofovir
Nat.Struct.Mol.Biol., 11, 2004
2F8U
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G-QUADRUPLEX STRUCTURE FORMED IN HUMAN BCL-2 PROMOTER, HYBRID FORM
Descriptor:5'-D(*GP*GP*GP*CP*GP*CP*GP*GP*GP*AP*GP*GP*AP*AP*TP*TP*GP*GP*GP*CP*GP*GP*G)-3'
Authors:Dai, J., Chen, D., Carver, M., Yang, D.
Deposit date:2005-12-03
Release date:2006-11-07
Last modified:2014-09-17
Method:SOLUTION NMR
Cite:NMR solution structure of the major G-quadruplex structure formed in the human BCL2 promoter region.
Nucleic Acids Res., 34, 2006
2KKA
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HUMAN TELOMERE DNA TWO-TETRAD QUADRUPLEX STRUCTURE IN K+ SOLUTION
Descriptor:5'-D(*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*IP*GP*GP*TP*TP*AP*GP*GP*GP*T)-3'
Authors:Zhang, Z., Dai, J., Yang, D.
Deposit date:2009-06-16
Release date:2009-12-15
Last modified:2014-09-17
Method:SOLUTION NMR
Cite:Structure of a two-G-tetrad intramolecular G-quadruplex formed by a variant human telomeric sequence in K+ solution: insights into the interconversion of human telomeric G-quadruplex structures.
Nucleic Acids Res., 38, 2010
3KLE
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CRYSTAL STRUCTURE OF AZT-RESISTANT HIV-1 REVERSE TRANSCRIPTASE CROSSLINKED TO A DSDNA WITH A BOUND EXCISION PRODUCT, AZTPPPPA
Descriptor:Reverse transcriptase/ribonuclease H, p51 RT, DNA (25-MER), ...
Authors:Tu, X., Das, K., Sarafianos, S.G., Arnold, E.
Deposit date:2009-11-07
Release date:2010-09-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural basis of HIV-1 resistance to AZT by excision.
Nat.Struct.Mol.Biol., 17, 2010
3KLF
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CRYSTAL STRUCTURE OF WILD-TYPE HIV-1 REVERSE TRANSCRIPTASE CROSSLINKED TO A DSDNA WITH A BOUND EXCISION PRODUCT, AZTPPPPA
Descriptor:Reverse transcriptase/ribonuclease H, p51 RT, DNA (5'-D(*AP*T*GP*CP*AP*TP*GP*GP*CP*GP*CP*CP*CP*GP*AP*AP*CP*AP*GP*GP*GP*AP*CP*TP*GP*TP*G)-3'), ...
Authors:Tu, X., Das, K., Sarafianos, S.G., Arnold, E.
Deposit date:2009-11-07
Release date:2010-09-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Structural basis of HIV-1 resistance to AZT by excision.
Nat.Struct.Mol.Biol., 17, 2010
3KLG
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CRYSTAL STRUCTURE OF AZT-RESISTANT HIV-1 REVERSE TRANSCRIPTASE CROSSLINKED TO PRE-TRANSLOCATION AZTMP-TERMINATED DNA (COMPLEX N)
Descriptor:Reverse transcriptase/ribonuclease H, p51 RT, DNA (5'-D(*AP*T*GP*CP*AP*TP*GP*GP*CP*GP*CP*CP*CP*GP*AP*AP*CP*AP*GP*GP*GP*AP*CP*TP*GP*TP*G)-3'), ...
Authors:Tu, X., Sarafianos, S.G., Arnold, E.
Deposit date:2009-11-07
Release date:2010-09-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.65 Å)
Cite:Structural basis of HIV-1 resistance to AZT by excision.
Nat.Struct.Mol.Biol., 17, 2010
3KLH
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CRYSTAL STRUCTURE OF AZT-RESISTANT HIV-1 REVERSE TRANSCRIPTASE CROSSLINKED TO POST-TRANSLOCATION AZTMP-TERMINATED DNA (COMPLEX P)
Descriptor:Reverse transcriptase/ribonuclease H, p51 RT, monoclonal antibody, ...
Authors:Tu, X., Sarafianos, S.G., Arnold, E.
Deposit date:2009-11-07
Release date:2010-09-22
Last modified:2013-09-18
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis of HIV-1 resistance to AZT by excision.
Nat.Struct.Mol.Biol., 17, 2010
3KLI
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CRYSTAL STRUCTURE OF UNLIGANDED AZT-RESISTANT HIV-1 REVERSE TRANSCRIPTASE
Descriptor:Reverse transcriptase/ribonuclease H, p51 RT
Authors:Tu, X., Sarafianos, S.G., Arnold, E.
Deposit date:2009-11-08
Release date:2010-09-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural basis of HIV-1 resistance to AZT by excision.
Nat.Struct.Mol.Biol., 17, 2010
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