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1LKM
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BU of 1lkm by Molmil
Crystal structure of Desulfovibrio vulgaris rubrerythrin all-iron(III) form
Descriptor: FE (III) ION, Rubrerythrin all-iron(III) form
Authors:Jin, S, Kurtz Jr, D.M, Liu, Z.J, Rose, J, Wang, B.C.
Deposit date:2002-04-25
Release date:2002-09-18
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:X-ray Crystal Structures of Reduced Rubrerythrin and its Azide Adduct: A Structure-Based Mechanism for a Non-Heme DiIron Peroxidase
J.Am.Chem.Soc., 124, 2002
1LKO
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BU of 1lko by Molmil
Crystal structure of Desulfovibrio vulgaris rubrerythrin all-iron(II) form
Descriptor: FE (II) ION, Rubrerythrin all-iron(II) form
Authors:Jin, S, Kurtz Jr, D.M, Liu, Z.J, Rose, J, Wang, B.C.
Deposit date:2002-04-25
Release date:2002-09-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:X-ray Crystal Structures of Reduced Rubrerythrin and its Azide Adduct: A Structure-Based Mechanism for a Non-Heme DiIron Peroxidase
J.Am.Chem.Soc., 124, 2002
1LKP
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BU of 1lkp by Molmil
Crystal structure of Desulfovibrio vulgaris rubrerythrin all-iron(II) form, azide adduct
Descriptor: AZIDE ION, FE (II) ION, Rubrerythrin
Authors:Jin, S, Kurtz Jr, D.M, Liu, Z.J, Rose, J, Wang, B.C.
Deposit date:2002-04-25
Release date:2002-09-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:X-ray Crystal Structures of Reduced Rubrerythrin and its Azide Adduct: A Structure-Based Mechanism for a Non-Heme Diiron Peroxidase
J.Am.Chem.Soc., 124, 2002
1QYB
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BU of 1qyb by Molmil
X-ray crystal structure of Desulfovibrio vulgaris rubrerythrin with zinc substituted into the [Fe(SCys)4] site and alternative diiron site structures
Descriptor: FE (III) ION, Rubrerythrin, SULFATE ION, ...
Authors:Jin, S, Kurtz, D.M, Liu, Z.J, Rose, J, Wang, B.C.
Deposit date:2003-09-10
Release date:2004-03-30
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:X-ray Crystal Structure of Desulfovibrio vulgaris Rubrerythrin with Zinc Substituted into the [Fe(SCys)(4)] Site and Alternative Diiron Site Structures.
Biochemistry, 43, 2004
1S30
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BU of 1s30 by Molmil
X-ray crystal structure of Desulfovibrio vulgaris Rubrerythrin with displacement of iron by zinc at the diiron Site
Descriptor: FE (III) ION, Rubrerythrin, ZINC ION
Authors:Jin, S, Kurtz Jr, D.M, Liu, Z.-J, Rose, J, Wang, B.-C.
Deposit date:2004-01-12
Release date:2004-06-22
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Displacement of iron by zinc at the diiron site of Desulfovibrio vulgaris rubrerythrin: X-ray crystal structure and anomalous scattering analysis
J.Inorg.Biochem., 98, 2004
1S2Z
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BU of 1s2z by Molmil
X-ray crystal structure of Desulfovibrio vulgaris Rubrerythrin with displacement of iron by zinc at the diiron Site
Descriptor: FE (III) ION, Rubrerythrin, ZINC ION
Authors:Jin, S, Kurtz Jr, D.M, Liu, Z.-J, Rose, J, Wang, B.-C.
Deposit date:2004-01-12
Release date:2004-06-22
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Displacement of iron by zinc at the diiron site of Desulfovibrio vulgaris rubrerythrin: X-ray crystal structure and anomalous scattering analysis
J.Inorg.Biochem., 98, 2004
5B5X
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BU of 5b5x by Molmil
Crystal structure of limiting CO2-inducible protein LCIC
Descriptor: SULFATE ION, ZINC ION, limiting CO2-inducible protein LCIC
Authors:Jin, S, Sun, J, Wunder, T, Tang, D, Mueller-Cajar, O.M, Gao, Y.
Deposit date:2016-05-24
Release date:2016-12-07
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.511 Å)
Cite:Structural insights into the LCIB protein family reveals a new group of beta-carbonic anhydrases
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5B60
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BU of 5b60 by Molmil
Crystal structure of PtLCIB4 S47R mutant, a homolog of the limiting CO2-inducible protein LCIB
Descriptor: CHLORIDE ION, PtLCIB4 S47R mutant, ZINC ION
Authors:Jin, S, Sun, J, Wunder, T, Tang, D, Mueller-Caja, O.M, Gao, Y.
Deposit date:2016-05-24
Release date:2016-12-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural insights into the LCIB protein family reveals a new group of beta-carbonic anhydrases
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5B5Z
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BU of 5b5z by Molmil
Crystal structure of PtLCIB4 H88A mutant, a homolog of the limiting CO2-inducible protein LCIB
Descriptor: PtLCIB4 H88A mutant, ZINC ION
Authors:Jin, S, Sun, J, Wunder, T, Tang, D, Mueller-Caja, O.M, Gao, Y.
Deposit date:2016-05-24
Release date:2016-12-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural insights into the LCIB protein family reveals a new group of beta-carbonic anhydrases
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5B5Y
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BU of 5b5y by Molmil
Crystal structure of PtLCIB4, a homolog of the limiting CO2-inducible protein LCIB
Descriptor: ACETATE ION, PtLCIB4, ZINC ION
Authors:Jin, S, Sun, J, Wunder, T, Tang, D, Mueller-Cajar, O.M, Gao, Y.
Deposit date:2016-05-24
Release date:2016-12-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural insights into the LCIB protein family reveals a new group of beta-carbonic anhydrases
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5K5W
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BU of 5k5w by Molmil
Crystal structure of limiting CO2-inducible protein LCIB
Descriptor: ZINC ION, limiting CO2-inducible protein LCIB
Authors:Jin, S, Sun, J, Wunder, T, Tang, D, Mueller-Cajar, O.M, Gao, Y.
Deposit date:2016-05-24
Release date:2016-12-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.591 Å)
Cite:Structural insights into the LCIB protein family reveals a new group of beta-carbonic anhydrases
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
6KFS
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BU of 6kfs by Molmil
Structure of CCM related protein
Descriptor: LCIB_C_CA domain-containing protein, ZINC ION
Authors:Jin, S, Gao, Y.G.
Deposit date:2019-07-08
Release date:2020-07-15
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structural and biochemical characterization of novel carbonic anhydrases from Phaeodactylum tricornutum.
Acta Crystallogr D Struct Biol, 76, 2020
8JDG
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BU of 8jdg by Molmil
Crystal structure of H405A mLDHD in complex with D-2-hydroxybutanoic acid
Descriptor: (2R)-2-oxidanylbutanoic acid, FLAVIN-ADENINE DINUCLEOTIDE, Probable D-lactate dehydrogenase, ...
Authors:Jin, S, Chen, X, Yang, J, Ding, J.
Deposit date:2023-05-14
Release date:2023-10-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Lactate dehydrogenase D is a general dehydrogenase for D-2-hydroxyacids and is associated with D-lactic acidosis.
Nat Commun, 14, 2023
8JDR
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BU of 8jdr by Molmil
Crystal structure of H405A mLDHD in complex with D-2-hydroxy-3-methyl-valeric acid
Descriptor: (2R,3S)-3-methyl-2-oxidanyl-pentanoic acid, FLAVIN-ADENINE DINUCLEOTIDE, Probable D-lactate dehydrogenase, ...
Authors:Jin, S, Chen, X, Yang, J, Ding, J.
Deposit date:2023-05-15
Release date:2023-10-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Lactate dehydrogenase D is a general dehydrogenase for D-2-hydroxyacids and is associated with D-lactic acidosis.
Nat Commun, 14, 2023
8JDB
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BU of 8jdb by Molmil
Crystal structure of H405A mLDHD in complex with D-2-hydroxyoctanoic acid
Descriptor: (2R)-2-oxidanyloctanoic acid, FLAVIN-ADENINE DINUCLEOTIDE, Probable D-lactate dehydrogenase, ...
Authors:Jin, S, Chen, X, Yang, J, Ding, J.
Deposit date:2023-05-13
Release date:2023-10-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Lactate dehydrogenase D is a general dehydrogenase for D-2-hydroxyacids and is associated with D-lactic acidosis.
Nat Commun, 14, 2023
8JDN
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BU of 8jdn by Molmil
Crystal structure of H405A mLDHD in complex with D-2-hydroxyvaleric acid
Descriptor: (2R)-2-oxidanylpentanoic acid, FLAVIN-ADENINE DINUCLEOTIDE, Probable D-lactate dehydrogenase, ...
Authors:Jin, S, Chen, X, Yang, J, Ding, J.
Deposit date:2023-05-15
Release date:2023-10-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Lactate dehydrogenase D is a general dehydrogenase for D-2-hydroxyacids and is associated with D-lactic acidosis.
Nat Commun, 14, 2023
8JDQ
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BU of 8jdq by Molmil
Crystal structure of H405A mLDHD in complex with D-2-hydroxyisocaproic acid
Descriptor: (2R)-2-hydroxy-4-methylpentanoic acid, FLAVIN-ADENINE DINUCLEOTIDE, Probable D-lactate dehydrogenase, ...
Authors:Jin, S, Chen, X, Yang, J, Ding, J.
Deposit date:2023-05-15
Release date:2023-10-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:Lactate dehydrogenase D is a general dehydrogenase for D-2-hydroxyacids and is associated with D-lactic acidosis.
Nat Commun, 14, 2023
8JDT
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BU of 8jdt by Molmil
Crystal structure of mLDHD in complex with 2-ketobutanoic acid
Descriptor: 2-KETOBUTYRIC ACID, FLAVIN-ADENINE DINUCLEOTIDE, MANGANESE (II) ION, ...
Authors:Jin, S, Chen, X, Yang, J, Ding, J.
Deposit date:2023-05-15
Release date:2023-10-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Lactate dehydrogenase D is a general dehydrogenase for D-2-hydroxyacids and is associated with D-lactic acidosis.
Nat Commun, 14, 2023
8JDC
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BU of 8jdc by Molmil
Crystal structure of mLDHD in apo form
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Probable D-lactate dehydrogenase, mitochondrial
Authors:Jin, S, Chen, X, Yang, J, Ding, J.
Deposit date:2023-05-13
Release date:2023-10-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.696 Å)
Cite:Lactate dehydrogenase D is a general dehydrogenase for D-2-hydroxyacids and is associated with D-lactic acidosis.
Nat Commun, 14, 2023
8JDO
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BU of 8jdo by Molmil
Crystal structure of H405A mLDHD in complex with D-2-hydroxyhexanoic acid
Descriptor: (2R)-2-hydroxyhexanoic acid, FLAVIN-ADENINE DINUCLEOTIDE, Probable D-lactate dehydrogenase, ...
Authors:Jin, S, Chen, X, Yang, J, Ding, J.
Deposit date:2023-05-15
Release date:2023-10-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Lactate dehydrogenase D is a general dehydrogenase for D-2-hydroxyacids and is associated with D-lactic acidosis.
Nat Commun, 14, 2023
8JDD
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BU of 8jdd by Molmil
Crystal structure of H405A mLDHD in apo form
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Probable D-lactate dehydrogenase, mitochondrial
Authors:Jin, S, Chen, X, Yang, J, Ding, J.
Deposit date:2023-05-13
Release date:2023-10-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Lactate dehydrogenase D is a general dehydrogenase for D-2-hydroxyacids and is associated with D-lactic acidosis.
Nat Commun, 14, 2023
8JDF
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BU of 8jdf by Molmil
Crystal structure of H405A mLDHD in complex with D-lactate
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, LACTIC ACID, Probable D-lactate dehydrogenase, ...
Authors:Jin, S, Chen, X, Yang, J, Ding, J.
Deposit date:2023-05-13
Release date:2023-10-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Lactate dehydrogenase D is a general dehydrogenase for D-2-hydroxyacids and is associated with D-lactic acidosis.
Nat Commun, 14, 2023
8JDS
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BU of 8jds by Molmil
Crystal structure of mLDHD in complex with Pyruvate
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, MANGANESE (II) ION, PYRUVIC ACID, ...
Authors:Jin, S, Chen, X, Yang, J, Ding, J.
Deposit date:2023-05-15
Release date:2023-10-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.636 Å)
Cite:Lactate dehydrogenase D is a general dehydrogenase for D-2-hydroxyacids and is associated with D-lactic acidosis.
Nat Commun, 14, 2023
8JDU
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BU of 8jdu by Molmil
Crystal structure of mLDHD in complex with 2-ketovaleric acid
Descriptor: 2-oxopentanoic acid, FLAVIN-ADENINE DINUCLEOTIDE, MANGANESE (II) ION, ...
Authors:Jin, S, Chen, X, Yang, J, Ding, J.
Deposit date:2023-05-15
Release date:2023-10-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Lactate dehydrogenase D is a general dehydrogenase for D-2-hydroxyacids and is associated with D-lactic acidosis.
Nat Commun, 14, 2023
8JDX
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BU of 8jdx by Molmil
Crystal structure of mLDHD in complex with 2-ketoisovaleric acid
Descriptor: 3-METHYL-2-OXOBUTANOIC ACID, FLAVIN-ADENINE DINUCLEOTIDE, MANGANESE (II) ION, ...
Authors:Jin, S, Chen, X, Yang, J, Ding, J.
Deposit date:2023-05-15
Release date:2023-10-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Lactate dehydrogenase D is a general dehydrogenase for D-2-hydroxyacids and is associated with D-lactic acidosis.
Nat Commun, 14, 2023

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PDB entries from 2024-03-27

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