Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1N4N
DownloadVisualize
BU of 1n4n by Molmil
Structure of the Plant Defensin PhD1 from Petunia Hybrida
Descriptor: floral defensin-like protein 1
Authors:Janssen, B.J.C, Schirra, H.J, Lay, F.T, Anderson, M.A, Craik, D.J.
Deposit date:2002-11-01
Release date:2003-11-01
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Structure of Petunia hybrida defensin 1, a novel plant defensin with five disulfide bonds
Biochemistry, 42, 2003
4GZA
DownloadVisualize
BU of 4gza by Molmil
Complex of mouse Plexin A2 - Semaphorin 3A - Neuropilin-1
Descriptor: CALCIUM ION, Neuropilin-1, Plexin-A2, ...
Authors:Janssen, B.J.C, Malinauskas, T, Siebold, C, Jones, E.Y.
Deposit date:2012-09-06
Release date:2012-10-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (7 Å)
Cite:Neuropilins lock secreted semaphorins onto plexins in a ternary signaling complex.
Nat.Struct.Mol.Biol., 19, 2012
4GZ8
DownloadVisualize
BU of 4gz8 by Molmil
Mouse Semaphorin 3A, domains Sema-PSI-IG
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, ...
Authors:Janssen, B.J.C, Malinauskas, T, Siebold, C, Jones, E.Y.
Deposit date:2012-09-06
Release date:2012-10-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Neuropilins lock secreted semaphorins onto plexins in a ternary signaling complex.
Nat.Struct.Mol.Biol., 19, 2012
4GZ9
DownloadVisualize
BU of 4gz9 by Molmil
Mouse Neuropilin-1, extracellular domains 1-4 (a1a2b1b2)
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Janssen, B.J.C, Malinauskas, T, Siebold, C, Jones, E.Y.
Deposit date:2012-09-06
Release date:2012-10-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Neuropilins lock secreted semaphorins onto plexins in a ternary signaling complex.
Nat.Struct.Mol.Biol., 19, 2012
6FAY
DownloadVisualize
BU of 6fay by Molmil
Teneurin3 monomer
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Odz3 protein
Authors:Janssen, B.J.C, Meijer, D.H.M, van Bezouwen, L.S.
Deposit date:2017-12-18
Release date:2018-03-28
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structures of Teneurin adhesion receptors reveal an ancient fold for cell-cell interaction.
Nat Commun, 9, 2018
5AMO
DownloadVisualize
BU of 5amo by Molmil
Structure of a mouse Olfactomedin-1 disulfide-linked dimer of the Olfactomedin domain and part of the coiled coil
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
Authors:Pronker, M.F, Bos, T.G.A.A, Sharp, T.H, Thies-Weesie, D.M, Janssen, B.J.C.
Deposit date:2015-03-11
Release date:2015-04-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Olfactomedin-1 Has a V-Shaped Disulfide-Linked Tetrameric Structure.
J.Biol.Chem., 290, 2015
8A0Y
DownloadVisualize
BU of 8a0y by Molmil
Crystal structure of mouse contactin 2 immunoglobulin domains
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Contactin-2, ...
Authors:Chataigner, L.M.P, Janssen, B.J.C.
Deposit date:2022-05-30
Release date:2023-11-01
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Contactin 2 homophilic adhesion structure and conformational plasticity.
Structure, 32, 2024
6QHJ
DownloadVisualize
BU of 6qhj by Molmil
High-resolution crystal structure of calcium- and sodium-bound mouse Olfactomedin-1 beta-propeller domain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, GLYCEROL, ...
Authors:Pronker, M.F, van den Hoek, H.G, Janssen, B.J.C.
Deposit date:2019-01-16
Release date:2019-09-11
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Design and structural characterisation of olfactomedin-1 variants as tools for functional studies.
BMC Mol Cell Biol, 20, 2019
6QM3
DownloadVisualize
BU of 6qm3 by Molmil
Crystal structure of a calcium- and sodium-bound mouse Olfactomedin-1 disulfide-linked dimer of the Olfactomedin domain and part of coiled coil
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, CACODYLATE ION, ...
Authors:Pronker, M.F, van den Hoek, H.G, Janssen, B.J.C.
Deposit date:2019-02-01
Release date:2019-09-11
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Design and structural characterisation of olfactomedin-1 variants as tools for functional studies.
BMC Mol Cell Biol, 20, 2019
7OL4
DownloadVisualize
BU of 7ol4 by Molmil
Mouse contactin-1 neurofascin-155 immunoglobulin domains adhesion complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Contactin-1, Neurofascin, ...
Authors:Chataigner, L.M.P, Janssen, B.J.C.
Deposit date:2021-05-19
Release date:2022-12-14
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (4.8 Å)
Cite:Structural insights into the contactin 1 - neurofascin 155 adhesion complex.
Nat Commun, 13, 2022
6STE
DownloadVisualize
BU of 6ste by Molmil
Crystal structure of the tick chemokine-binding protein Evasin-4 (SG 3)
Descriptor: ACETATE ION, DI(HYDROXYETHYL)ETHER, Evasin-4, ...
Authors:Ramirez-Escudero, M, Janssen, B.J.C.
Deposit date:2019-09-10
Release date:2020-09-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Structural characterization of anti-CCL5 activity of the tick salivary protein evasin-4.
J.Biol.Chem., 295, 2020
6ST4
DownloadVisualize
BU of 6st4 by Molmil
Crystal structure of the tick chemokine-binding protein Evasin-4 (SG 1)
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Evasin-4
Authors:Ramirez-Escudero, M, Janssen, B.J.C.
Deposit date:2019-09-10
Release date:2020-09-02
Last modified:2020-10-28
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Structural characterization of anti-CCL5 activity of the tick salivary protein evasin-4.
J.Biol.Chem., 295, 2020
6STC
DownloadVisualize
BU of 6stc by Molmil
Crystal structure of the tick chemokine-binding protein Evasin-4 (SG 2)
Descriptor: ACETATE ION, DI(HYDROXYETHYL)ETHER, Evasin-4
Authors:Ramirez-Escudero, M, Janssen, B.J.C.
Deposit date:2019-09-10
Release date:2020-09-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Structural characterization of anti-CCL5 activity of the tick salivary protein evasin-4.
J.Biol.Chem., 295, 2020
6STK
DownloadVisualize
BU of 6stk by Molmil
Crystal structure of the CC-chemokine 5 (CCL5) E66S mutation
Descriptor: ACETATE ION, C-C motif chemokine 5, GLYCEROL
Authors:Ramirez-Escudero, M, Janssen, B.J.C.
Deposit date:2019-09-10
Release date:2020-09-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Structural characterization of anti-CCL5 activity of the tick salivary protein evasin-4.
J.Biol.Chem., 295, 2020
6FFY
DownloadVisualize
BU of 6ffy by Molmil
Structure of the mouse SorCS2-NGF complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-nerve growth factor, VPS10 domain-containing receptor SorCS2, ...
Authors:Leloup, N.O.L, Janssen, B.J.C.
Deposit date:2018-01-09
Release date:2018-08-01
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Structural insights into SorCS2-Nerve Growth Factor complex formation.
Nat Commun, 9, 2018
6FG9
DownloadVisualize
BU of 6fg9 by Molmil
Mouse SORCS2 ectodomain (sortilin related VPS10 domain containing receptor 2)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, VPS10 domain-containing receptor SorCS2
Authors:Leloup, N.O.L, Janssen, B.J.C.
Deposit date:2018-01-10
Release date:2018-08-01
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (4.2 Å)
Cite:Structural insights into SorCS2-Nerve Growth Factor complex formation.
Nat Commun, 9, 2018
7OM4
DownloadVisualize
BU of 7om4 by Molmil
Nanobody EgB4 bound to the full extracellular EGFR-EGF complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Epidermal growth factor, Epidermal growth factor receptor, ...
Authors:Zeronian, M.R, Janssen, B.J.C.
Deposit date:2021-05-21
Release date:2022-03-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (6.05 Å)
Cite:Structural insights into the non-inhibitory mechanism of the anti-EGFR EgB4 nanobody.
Bmc Mol Cell Biol, 23, 2022
7OM5
DownloadVisualize
BU of 7om5 by Molmil
Anti-EGFR nanobody EgB4
Descriptor: GLYCEROL, Nanobody EgB4, ZINC ION
Authors:Zeronian, M.R, Janssen, B.J.C.
Deposit date:2021-05-21
Release date:2022-03-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Structural insights into the non-inhibitory mechanism of the anti-EGFR EgB4 nanobody.
Bmc Mol Cell Biol, 23, 2022
7OL2
DownloadVisualize
BU of 7ol2 by Molmil
Crystal structure of mouse contactin 1 immunoglobulin domains
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Contactin-1, ...
Authors:Chataigner, L.M.P, Janssen, B.J.C.
Deposit date:2021-05-19
Release date:2022-12-14
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.89 Å)
Cite:Structural insights into the contactin 1 - neurofascin 155 adhesion complex.
Nat Commun, 13, 2022
7OK5
DownloadVisualize
BU of 7ok5 by Molmil
Crystal structure of mouse neurofascin 155 immunoglobulin domains
Descriptor: Neurofascin 155, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Chataigner, L.M.P, Janssen, B.J.C.
Deposit date:2021-05-17
Release date:2022-12-14
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.97 Å)
Cite:Structural insights into the contactin 1 - neurofascin 155 adhesion complex.
Nat Commun, 13, 2022
7PLP
DownloadVisualize
BU of 7plp by Molmil
Human Teneurin-4 C-rich domain
Descriptor: CALCIUM ION, FE (III) ION, NICKEL (II) ION, ...
Authors:Beugelink, J.W, Meijer, D.H, Janssen, B.J.C.
Deposit date:2021-09-01
Release date:2022-02-02
Last modified:2022-05-11
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Teneurin4 dimer structures reveal a calcium-stabilized compact conformation supporting homomeric trans-interactions.
Embo J., 41, 2022
7ABV
DownloadVisualize
BU of 7abv by Molmil
Structure of the S1-cleaved mouse Notch1 Negative Regulatory Region (NRR)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Neurogenic locus notch homolog protein 1
Authors:Zeronian, M.R, Janssen, B.J.C.
Deposit date:2020-09-08
Release date:2021-07-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.065 Å)
Cite:Notch-Jagged signaling complex defined by an interaction mosaic.
Proc.Natl.Acad.Sci.USA, 118, 2021
7AG5
DownloadVisualize
BU of 7ag5 by Molmil
Structure of the Laspartomycin C double mutant G4D D-allo-Thr9D-Dap in complex with Geranyl phosphate
Descriptor: (~{E})-13-methyltetradec-2-enoic acid, CALCIUM ION, Geranyl phosphate, ...
Authors:Zeronian, M.R, Pearce, N.M, Wood, T.M, Martin, N.I, Janssen, B.J.C.
Deposit date:2020-09-21
Release date:2022-02-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.04 Å)
Cite:Mechanistic insights into the C55-P targeting lipopeptide antibiotics revealed by structure-activity studies and high-resolution crystal structures
Chem Sci, 13, 2022
7ANY
DownloadVisualize
BU of 7any by Molmil
Structure of the Laspartomycin C Friulimicin-like mutant in complex with Geranyl phosphate
Descriptor: CADMIUM ION, CALCIUM ION, CHLORIDE ION, ...
Authors:Zeronian, M.R, Pearce, N.M, Lutz, M, Wood, T.M, Martin, N.I, Janssen, B.J.C.
Deposit date:2020-10-13
Release date:2022-02-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.135 Å)
Cite:Mechanistic insights into the C55-P targeting lipopeptide antibiotics revealed by structure-activity studies and high-resolution crystal structures
Chem Sci, 13, 2022
7BAM
DownloadVisualize
BU of 7bam by Molmil
human Teneurin4 WT C2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Meijer, D.H, Janssen, B.J.C.
Deposit date:2020-12-16
Release date:2021-12-01
Last modified:2022-05-11
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Teneurin4 dimer structures reveal a calcium-stabilized compact conformation supporting homomeric trans-interactions.
Embo J., 41, 2022

 

123>

217705

PDB entries from 2024-03-27

PDB statisticsPDBj update infoContact PDBjnumon