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108D
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BU of 108d by Molmil
THE SOLUTION STRUCTURE OF A DNA COMPLEX WITH THE FLUORESCENT BIS INTERCALATOR TOTO DETERMINED BY NMR SPECTROSCOPY
Descriptor: 1,1-(4,4,8,8-TETRAMETHYL-4,8-DIAZAUNDECAMETHYLENE)-BIS-4-3-METHYL-2,3-DIHYDRO-(BENZO-1,3-THIAZOLE)-2-METHYLIDENE)-QUINOLINIUM, DNA (5'-D(*CP*GP*CP*TP*AP*GP*CP*G)-3')
Authors:Spielmann, H.P, Wemmer, D.E, Jacobsen, J.P.
Deposit date:1995-01-31
Release date:1995-06-03
Last modified:2024-03-13
Method:SOLUTION NMR
Cite:Solution structure of a DNA complex with the fluorescent bis-intercalator TOTO determined by NMR spectroscopy.
Biochemistry, 34, 1995
214D
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BU of 214d by Molmil
THE SOLUTION STRUCTURE OF A DNA DUPLEX CONTAINING A SINGLE 2'-O-METHYL-BETA-D-ARAT
Descriptor: DNA (5'-D(*CP*GP*CP*AP*TP*AP*TP*AP*GP*CP*C)-3'), DNA (5'-D(*GP*GP*CP*TP*AP*(T41)P*AP*TP*GP*CP*G)-3')
Authors:Gotfredsen, C.H, Spielmann, H.P, Wengel, J, Jacobsen, J.P.
Deposit date:1995-07-07
Release date:1995-10-15
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Structure of a DNA duplex containing a single 2'-O-methyl-beta-D-araT: combined use of NMR, restrained molecular dynamics, and full relaxation matrix refinement.
Bioconjug.Chem., 7, 1996
1OCI
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BU of 1oci by Molmil
[3.2.0]bcANA:DNA
Descriptor: 5'-D(*CP*TP*GP*A TLBP*AP*TP*GP*CP)-3', 5'-D(*GP*CP*AP*TP*AP*TP*CP*AP*GP)-3'
Authors:Tommerholt, H.V, Christensen, N.K, Nielsen, P, Wengel, J, Stein, P.C, Jacobsen, J.P, Petersen, M.
Deposit date:2003-02-07
Release date:2003-07-14
Last modified:2018-01-17
Method:SOLUTION NMR
Cite:NMR Solution Structure of a DsDNA Containing a Bicyclic D-Arabino-Configured Nucleotide Fixed in an O4'-Endo Sugar Conformation
Org.Biomol.Chem., 1, 2003
1HG9
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BU of 1hg9 by Molmil
Solution structure of DNA:RNA hybrid
Descriptor: 5- D(*CP*TP*GP*AP*TP*AP*TP*GP*C) -3, 5- R(*GP*CP*AP*UP*AP*UP*CP*AP*G) -3
Authors:Petersen, M, Bondensgaard, K, Wengel, J, Jacobsen, J.P.
Deposit date:2000-12-13
Release date:2002-01-02
Last modified:2019-10-09
Method:SOLUTION NMR
Cite:Structural studies of LNA:RNA duplexes by NMR: conformations and implications for RNase H activity.
Chemistry, 6, 2000
1HHW
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BU of 1hhw by Molmil
Solution structure of LNA1:RNA hybrid
Descriptor: 5- D(*CP*TP*GP*AP*+TLNP*AP*TP*GP*C) -3, 5- R(*GP*CP*AP*UP*AP*UP*CP*AP*G) -3
Authors:Petersen, M, Bondensgaard, K, Wengel, J, Jacobsen, J.P.
Deposit date:2000-12-29
Release date:2002-05-30
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Locked Nucleic Acid (Lna) Recognition of RNA: NMR Solution Structures of Lna:RNA Hybrids
J.Am.Chem.Soc., 124, 2002
1HHX
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BU of 1hhx by Molmil
Solution structure of LNA3:RNA hybrid
Descriptor: 5- D(*CP*+TP*GP*AP*+TP*AP*+TP*GP*C) -3, 5- R(*GP*CP*AP*UP*AP*UP*CP*AP*G) -3
Authors:Petersen, M, Bondensgaard, K, Wengel, J, Jacobsen, J.P.
Deposit date:2000-12-29
Release date:2002-05-30
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Locked Nucleic Acid (Lna) Recognition of RNA: NMR Solution Structures of Lna:RNA Hybrids
J.Am.Chem.Soc., 124, 2002
1GV6
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BU of 1gv6 by Molmil
Solution structure of alfa-L-LNA:DNA duplex
Descriptor: 5- D(*CP*(ATL)P*GP*CP*(ATL)P*(ATL)P*CP*(ATL)P* GP*C) -3, 5- D(*GP*CP*AP*GP*AP*AP*GP*CP*AP*G) -3
Authors:Nielsen, K.M.E, Petersen, M, Haakansson, A.E, Wengel, J, Jacobsen, J.P.
Deposit date:2002-02-06
Release date:2002-07-05
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Alfa-L-Lna (Alfa-L-Ribo Configured Locked Nucleic Acid) Recognition of DNA: An NMR Spectroscopic Study
Chemistry, 8, 2002
1H0Q
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BU of 1h0q by Molmil
NMR solution structure of a fully modified locked nucleic acid (LNA) hybridized to RNA
Descriptor: 5-D(*(LKC)P*(TLN)P*(LCG)P*(LCA)P*(TLN)P*(LCA)P* (TLN)P*(LCG)P*(LCC))-3, 5-R(*GP*CP*AP*UP*AP*UP*CP*AP*G)-3
Authors:Rasmussen, J, Petersen, M, Nielsen, K.E, Kumar, R, Wengel, J, Jacobsen, J.P.
Deposit date:2002-06-27
Release date:2003-07-17
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:NMR Studies of Fully Modified Locked Nucleic Acid (Lna) Hybrids: Solution Structure of an Lna:RNA Hybrid and Characterization of an Lna:RNA Hybrid
Bioconjug.Chem., 15, 2004
1G7Z
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BU of 1g7z by Molmil
NMR SOLUTION STRUCTURE OF D(CGCTAGCG)2
Descriptor: 5'-D(*CP*GP*CP*TP*AP*GP*CP*G)-3'
Authors:Isaacs, R.J, Spielmann, H.P.
Deposit date:2000-11-15
Release date:2001-03-28
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Relationship of DNA structure to internal dynamics: correlation of helical parameters from NOE-based NMR solution structures of d(GCGTACGC)(2) and d(CGCTAGCG)(2) with (13)C order parameters implies conformational coupling in dinucleotide units.
J.Mol.Biol., 307, 2001

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