Author results

1Q9P
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SOLUTION STRUCTURE OF THE MATURE HIV-1 PROTEASE MONOMER
Descriptor:HIV-1 Protease
Authors:Ishima, R., Torchia, D.A., Lynch, S.M., Gronenborn, A.M., Louis, J.M.
Deposit date:2003-08-25
Release date:2004-03-02
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of the mature HIV-1 protease monomer: Insight into the tertiary fold and stability of a precursor
J.Biol.Chem., 278, 2003
1GUR
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GURMARIN, A SWEET TASTE-SUPPRESSING POLYPEPTIDE, NMR, 10 STRUCTURES
Descriptor:GURMARIN
Authors:Arai, K., Ishima, R., Morikawa, S., Imoto, T., Yoshimura, S., Aimoto, S., Akasaka, K.
Deposit date:1996-03-12
Release date:1996-08-01
Last modified:2019-12-25
Method:SOLUTION NMR
Cite:Three-dimensional structure of gurmarin, a sweet taste-suppressing polypeptide.
J.Biomol.NMR, 5, 1995
1BXD
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NMR STRUCTURE OF THE HISTIDINE KINASE DOMAIN OF THE E. COLI OSMOSENSOR ENVZ
Descriptor:PROTEIN (OSMOLARITY SENSOR PROTEIN (ENVZ)), PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Tanaka, T., Saha, S.K., Tomomori, C., Ishima, R., Liu, D., Tong, K.I., Park, H., Dutta, R., Qin, L., Swindells, M.B., Yamazaki, T., Ono, A.M., Kainosho, M., Inouye, M., Ikura, M.
Deposit date:1998-10-02
Release date:1999-10-02
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:NMR structure of the histidine kinase domain of the E. coli osmosensor EnvZ.
Nature, 396, 1998
1JOY
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SOLUTION STRUCTURE OF THE HOMODIMERIC DOMAIN OF ENVZ FROM ESCHERICHIA COLI BY MULTI-DIMENSIONAL NMR.
Descriptor:PROTEIN (ENVZ_ECOLI)
Authors:Tomomori, C., Tanaka, T., Dutta, R., Park, H., Saha, S.K., Zhu, Y., Ishima, R., Liu, D., Tong, K.I., Kurokawa, H., Qian, H., Inouye, M., Ikura, M.
Deposit date:1998-12-28
Release date:2000-01-12
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of the homodimeric core domain of Escherichia coli histidine kinase EnvZ.
Nat.Struct.Biol., 6, 1999
1JSA
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MYRISTOYLATED RECOVERIN WITH TWO CALCIUMS BOUND, NMR, 24 STRUCTURES
Descriptor:RECOVERIN, CALCIUM ION, MYRISTIC ACID
Authors:Ames, J.B., Ishima, R., Tanaka, T., Gordon, J.I., Stryer, L., Ikura, M.
Deposit date:1997-06-04
Release date:1997-10-15
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Molecular mechanics of calcium-myristoyl switches.
Nature, 389, 1997
1TBA
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SOLUTION STRUCTURE OF A TBP-TAFII230 COMPLEX: PROTEIN MIMICRY OF THE MINOR GROOVE SURFACE OF THE TATA BOX UNWOUND BY TBP, NMR, 25 STRUCTURES
Descriptor:TRANSCRIPTION INITIATION FACTOR IID 230K CHAIN, TRANSCRIPTION INITIATION FACTOR TFIID
Authors:Liu, D., Ishima, R., Tong, K.I., Bagby, S., Kokubo, T., Muhandiram, D.R., Kay, L.E., Nakatani, Y., Ikura, M.
Deposit date:1998-08-16
Release date:1999-08-16
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of a TBP-TAF(II)230 complex: protein mimicry of the minor groove surface of the TATA box unwound by TBP.
Cell(Cambridge,Mass.), 94, 1998
3JVW
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HIV-1 PROTEASE MUTANT G86A WITH SYMMETRIC INHIBITOR DMP323
Descriptor:Gag-Pol polyprotein, [4-R-(-4-ALPHA,5-ALPHA,6-BETA,7-BETA)]-HEXAHYDRO-5,6-BIS(HYDROXY)-[1,3-BIS([4-HYDROXYMETHYL-PHENYL]METHYL)-4,7-BIS(PHENYLMETHYL)]-2H-1,3-DIAZEPINONE
Authors:Tie, Y., Weber, I.T.
Deposit date:2009-09-17
Release date:2009-12-08
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Highly conserved glycine 86 and arginine 87 residues contribute differently to the structure and activity of the mature HIV-1 protease
Proteins, 78, 2009
3JVY
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HIV-1 PROTEASE MUTANT G86A WITH DARUNAVIR
Descriptor:Gag-Pol polyprotein, SODIUM ION, CHLORIDE ION, ...
Authors:Tie, Y., Weber, I.T.
Deposit date:2009-09-17
Release date:2009-12-08
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Highly conserved glycine 86 and arginine 87 residues contribute differently to the structure and activity of the mature HIV-1 protease
Proteins, 78, 2009
3JW2
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HIV-1 PROTEASE MUTANT G86S WITH DARUNAVIR
Descriptor:Gag-Pol polyprotein, (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, SODIUM ION, ...
Authors:Tie, Y., Weber, I.T.
Deposit date:2009-09-17
Release date:2009-12-08
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Highly conserved glycine 86 and arginine 87 residues contribute differently to the structure and activity of the mature HIV-1 protease
Proteins, 78, 2009
3BVA
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CYSTAL STRUCTURE OF HIV-1 ACTIVE SITE MUTANT D25N AND P2-NC ANALOG INHIBITOR
Descriptor:Protease (Retropepsin), GLYCEROL, N-{(2S)-2-[(N-acetyl-L-threonyl-L-isoleucyl)amino]hexyl}-L-norleucyl-L-glutaminyl-N~5~-[amino(iminio)methyl]-L-ornithinamide
Authors:Liu, F., Weber, I.T.
Deposit date:2008-01-05
Release date:2008-04-01
Last modified:2013-02-27
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Effect of the Active Site D25N Mutation on the Structure, Stability, and Ligand Binding of the Mature HIV-1 Protease.
J.Biol.Chem., 283, 2008
3BVB
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CYSTAL STRUCTURE OF HIV-1 ACTIVE SITE MUTANT D25N AND INHIBITOR DARUNAVIR
Descriptor:Protease (Retropepsin), SODIUM ION, CHLORIDE ION, ...
Authors:Liu, F., Weber, I.T.
Deposit date:2008-01-05
Release date:2008-04-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Effect of the Active Site D25N Mutation on the Structure, Stability, and Ligand Binding of the Mature HIV-1 Protease.
J.Biol.Chem., 283, 2008
1C4E
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GURMARIN FROM GYMNEMA SYLVESTRE
Descriptor:PROTEIN (GURMARIN)
Authors:Fletcher, J.I., Dingley, A.J., King, G.F.
Deposit date:1999-07-27
Release date:1999-08-27
Last modified:2019-12-25
Method:SOLUTION NMR
Cite:High-resolution solution structure of gurmarin, a sweet-taste-suppressing plant polypeptide.
Eur.J.Biochem., 264, 1999
1TFB
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NMR STUDIES OF HUMAN GENERAL TRANSCRIPTION FACTOR TFIIB: DYNAMICS AND INTERACTION WITH VP16 ACTIVATION DOMAIN, 20 STRUCTURES
Descriptor:TFIIB
Authors:Bagby, S., Ikura, M.
Deposit date:1996-11-14
Release date:1997-03-12
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Human general transcription factor TFIIB: conformational variability and interaction with VP16 activation domain.
Biochemistry, 37, 1998
2L4J
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YAP WW2
Descriptor:Yes-associated protein 2 (YAP2)
Authors:Webb, C., Upadhyay, A., Furutani-Seiki, M., Bagby, S.
Deposit date:2010-10-07
Release date:2010-11-03
Last modified:2020-02-05
Method:SOLUTION NMR
Cite:Structural Features and Ligand Binding Properties of Tandem WW Domains from YAP and TAZ, Nuclear Effectors of the Hippo Pathway.
Biochemistry, 50, 2011
3RLZ
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2.0 ANGSTROM X-RAY STRUCTURE OF BOVINE CA(2+)-S100B D63N
Descriptor:Protein S100-B, CALCIUM ION
Authors:Liriano, M.A., Weber, D.J.
Deposit date:2011-04-20
Release date:2012-04-25
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:The effects of CapZ peptide (TRTK12) on the protein dynamics of S100B and S100B D63N
To be Published
3RM1
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1.24 ANGSTROM X-RAY STRUCTURE OF BOVINE TRTK12-CA(2+)-S100B D63N
Descriptor:Protein S100-B, F-actin-capping protein subunit alpha-2, CALCIUM ION
Authors:Liriano, M.A., Weber, D.J.
Deposit date:2011-04-20
Release date:2012-04-25
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:The effects of CapZ peptide (TRTK12) on the protein dynamics of S100B and S100B D63N
To be Published
4DIR
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2.6 ANGSTROM X-RAY STRUCTURE OF HUMAN CA(2+)-S100A5
Descriptor:Protein S100-A5, CALCIUM ION
Authors:Liriano, M.A., Toth, E.A., Weber, D.J.
Deposit date:2012-01-31
Release date:2013-02-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Target-binding to S100A5 changes Ca(2+)-binding affinity and dynamics.
To be Published
5UV5
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CRYSTAL STRUCTURE OF A 2-HYDROXYISOQUINOLINE-1,3-DIONE RNASE H ACTIVE SITE INHIBITOR WITH MULTIPLE BINDING MODES TO HIV REVERSE TRANSCRIPTASE
Descriptor:Reverse transcriptase/ribonuclease H, p51 RT, MANGANESE (II) ION, ...
Authors:Kirby, K.A., Sarafianos, S.G.
Deposit date:2017-02-19
Release date:2017-08-16
Last modified:2019-12-11
Method:X-RAY DIFFRACTION (3 Å)
Cite:A 2-Hydroxyisoquinoline-1,3-Dione Active-Site RNase H Inhibitor Binds in Multiple Modes to HIV-1 Reverse Transcriptase.
Antimicrob. Agents Chemother., 61, 2017
6FB4
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HUMAN KIBRA C2 DOMAIN MUTANT C771A
Descriptor:Protein KIBRA, GLYCEROL, PHOSPHATE ION
Authors:Crennell, S.J., Posner, M.G., Bagby, S.
Deposit date:2017-12-18
Release date:2018-05-16
Last modified:2018-06-27
Method:X-RAY DIFFRACTION (2.415631 Å)
Cite:Distinctive phosphoinositide- and Ca2+-binding properties of normal and cognitive performance-linked variant forms of KIBRA C2 domain.
J. Biol. Chem., 293, 2018
6FD0
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HUMAN KIBRA C2 DOMAIN MUTANT M734I S735A
Descriptor:Protein KIBRA, DI(HYDROXYETHYL)ETHER, GLYCEROL
Authors:Crennell, S.J., Posner, M.G., Bagby, S.
Deposit date:2017-12-21
Release date:2018-05-16
Last modified:2018-06-27
Method:X-RAY DIFFRACTION (2.642159 Å)
Cite:Distinctive phosphoinositide- and Ca2+-binding properties of normal and cognitive performance-linked variant forms of KIBRA C2 domain.
J. Biol. Chem., 293, 2018
6FJC
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HUMAN KIBRA C2 DOMAIN MUTANT C771A IN COMPLEX WITH PHOSPHATIDYLINOSITOL 3,4,5-TRISPHOSPHATE
Descriptor:Protein KIBRA, GLYCEROL, (2R)-3-{[(S)-{[(2S,3R,5S,6S)-2,6-DIHYDROXY-3,4,5-TRIS(PHOSPHONOOXY)CYCLOHEXYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-2-(1-HYDROXYBUTOXY)PROPYL BUTYRATE, ...
Authors:Crennell, S.J., Posner, M.G., Bagby, S.
Deposit date:2018-01-22
Release date:2018-05-16
Last modified:2018-06-27
Method:X-RAY DIFFRACTION (2.598 Å)
Cite:Distinctive phosphoinositide- and Ca2+-binding properties of normal and cognitive performance-linked variant forms of KIBRA C2 domain.
J. Biol. Chem., 293, 2018
6FJD
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HUMAN KIBRA C2 DOMAIN MUTANT C771A IN COMPLEX WITH PHOSPHATIDYLINOSITOL 4,5-BISPHOSPHATE
Descriptor:Protein KIBRA, GLYCEROL, SULFATE ION, ...
Authors:Crennell, S.J., Posner, M.G., Bagby, S.
Deposit date:2018-01-22
Release date:2018-05-16
Last modified:2018-06-27
Method:X-RAY DIFFRACTION (2.898 Å)
Cite:Distinctive phosphoinositide- and Ca2+-binding properties of normal and cognitive performance-linked variant forms of KIBRA C2 domain.
J. Biol. Chem., 293, 2018