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8A0J
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BU of 8a0j by Molmil
Crystal structure of the kinetoplastid kinetochore protein Trypanosoma congolense KKT2 divergent polo-box domain
Descriptor: Uncharacterized protein TCIL3000_11_11110
Authors:Ishii, M, Ludzia, P, Marciano, G, Allen, W, Nerusheva, O, Akiyoshi, B.
Deposit date:2022-05-27
Release date:2022-06-15
Last modified:2022-11-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Divergent polo boxes in KKT2 bind KKT1 to initiate the kinetochore assembly cascade in Trypanosoma brucei.
Mol.Biol.Cell, 33, 2022
8A0K
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BU of 8a0k by Molmil
crystal structure of the kinetoplastid kinetochore protein Trypanosoma brucei KKT3 Divergent Polo-Box domain
Descriptor: DI(HYDROXYETHYL)ETHER, Protein kinase, putative
Authors:Ishii, M, Ludzia, P, Marciano, G, Allen, W, Nerusheva, O.O, Akiyoshi, B.
Deposit date:2022-05-27
Release date:2022-06-15
Last modified:2022-11-30
Method:X-RAY DIFFRACTION (2.92 Å)
Cite:Divergent polo boxes in KKT2 bind KKT1 to initiate the kinetochore assembly cascade in Trypanosoma brucei.
Mol.Biol.Cell, 33, 2022
5H6T
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BU of 5h6t by Molmil
Crystal structure of Hydrazidase from Microbacterium sp. strain HM58-2
Descriptor: Amidase
Authors:Akiyama, T, Ishii, M, Takuwa, A, Oinuma, K, Sasaki, Y, Takaya, N, Yajima, S.
Deposit date:2016-11-15
Release date:2017-03-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural basis of the substrate recognition of hydrazidase isolated from Microbacterium sp. strain HM58-2, which catalyzes acylhydrazide compounds as its sole carbon source
Biochem. Biophys. Res. Commun., 482, 2017
6TLX
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BU of 6tlx by Molmil
Crystal structure of the unconventional kinetochore protein Perkinsela sp. KKT2a central domain
Descriptor: Protein kinase, ZINC ION
Authors:Marciano, G, Nerusheva, O, Ishii, M, Akiyoshi, B.
Deposit date:2019-12-03
Release date:2019-12-25
Last modified:2021-06-23
Method:X-RAY DIFFRACTION (2.87 Å)
Cite:Kinetoplastid kinetochore proteins KKT2 and KKT3 have unique centromere localization domains.
J.Cell Biol., 220, 2021
4IJ6
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BU of 4ij6 by Molmil
Crystal Structure of a Novel-type Phosphoserine Phosphatase Mutant (H9A) from Hydrogenobacter thermophilus TK-6 in Complex with L-phosphoserine
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, PHOSPHOSERINE, ...
Authors:Chiba, Y, Horita, S, Ohtsuka, J, Arai, H, Nagata, K, Igarashi, Y, Tanokura, M, Ishii, M.
Deposit date:2012-12-21
Release date:2013-03-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural units important for activity of a novel-type phosphoserine phosphatase from Hydrogenobacter thermophilus TK-6 revealed by crystal structure analysis
J.Biol.Chem., 288, 2013
4IJ5
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Crystal Structure of a Novel-type Phosphoserine Phosphatase from Hydrogenobacter thermophilus TK-6
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Phosphoserine phosphatase 1
Authors:Chiba, Y, Horita, S, Ohtsuka, J, Arai, H, Nagata, K, Igarashi, Y, Tanokura, M, Ishii, M.
Deposit date:2012-12-21
Release date:2013-03-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural units important for activity of a novel-type phosphoserine phosphatase from Hydrogenobacter thermophilus TK-6 revealed by crystal structure analysis
J.Biol.Chem., 288, 2013
5XFA
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BU of 5xfa by Molmil
Crystal structure of NAD+-reducing [NiFe]-hydrogenase in the H2-reduced state
Descriptor: CARBONMONOXIDE-(DICYANO) IRON, FE2/S2 (INORGANIC) CLUSTER, IRON/SULFUR CLUSTER, ...
Authors:Shomura, Y, Taketa, M, Nakashima, H, Tai, H, Nakagawa, H, Ikeda, Y, Ishii, M, Igarashi, Y, Nishihara, H, Yoon, K.S, Ogo, S, Hirota, S, Higuchi, Y.
Deposit date:2017-04-09
Release date:2017-08-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis of the redox switches in the NAD(+)-reducing soluble [NiFe]-hydrogenase
Science, 357, 2017
5XF9
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BU of 5xf9 by Molmil
Crystal structure of NAD+-reducing [NiFe]-hydrogenase in the air-oxidized state
Descriptor: CARBONMONOXIDE-(DICYANO) IRON, FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, ...
Authors:Shomura, Y, Taketa, M, Nakashima, H, Tai, H, Nakagawa, H, Ikeda, Y, Ishii, M, Igarashi, Y, Nishihara, H, Yoon, K.S, Ogo, S, Hirota, S, Higuchi, Y.
Deposit date:2017-04-09
Release date:2017-08-23
Last modified:2017-09-20
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:Structural basis of the redox switches in the NAD(+)-reducing soluble [NiFe]-hydrogenase
Science, 357, 2017
8WUC
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BU of 8wuc by Molmil
Cryo-EM structure of H. thermoluteolus GroEL-GroES2 football complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Chaperonin GroEL, Co-chaperonin GroES, ...
Authors:Liao, Z, Gopalasingam, C.C, Kameya, M, Gerle, C, Shigematsu, H, Ishii, M, Arakawa, T, Fushinobu, S.
Deposit date:2023-10-20
Release date:2024-03-27
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Structural insights into thermophilic chaperonin complexes.
Structure, 2024
8WUW
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BU of 8wuw by Molmil
Cryo-EM structure of H. thermophilus GroEL-GroES2 asymmetric football complex
Descriptor: Chaperonin GroEL, Co-chaperonin GroES, MAGNESIUM ION, ...
Authors:Liao, Z, Gopalasingam, C.C, Kameya, M, Gerle, C, Shigematsu, H, Ishii, M, Arakawa, T, Fushinobu, S.
Deposit date:2023-10-21
Release date:2024-03-27
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Structural insights into thermophilic chaperonin complexes.
Structure, 2024
8WU4
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BU of 8wu4 by Molmil
Cryo-EM structure of native H. thermoluteolus TH-1 GroEL
Descriptor: Chaperonin GroEL
Authors:Liao, Z, Gopalasingam, C.C, Kameya, M, Gerle, C, Shigematsu, H, Ishii, M, Arakawa, T, Fushinobu, S.
Deposit date:2023-10-20
Release date:2024-03-27
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural insights into thermophilic chaperonin complexes.
Structure, 2024
8WUX
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BU of 8wux by Molmil
Cryo-EM structure of H. thermophilus GroEL-GroES bullet complex
Descriptor: Chaperonin GroEL, Co-chaperonin GroES, MAGNESIUM ION, ...
Authors:Liao, Z, Gopalasingam, C.C, Kameya, M, Gerle, C, Shigematsu, H, Ishii, M, Arakawa, T, Fushinobu, S.
Deposit date:2023-10-21
Release date:2024-03-27
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Structural insights into thermophilic chaperonin complexes.
Structure, 2024
6TLY
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BU of 6tly by Molmil
Crystal structure of the unconventional kinetochore protein Bodo saltans KKT2 central domain
Descriptor: CHLORIDE ION, Protein kinase, putative, ...
Authors:Marciano, G, Nerusheva, O, Ishii, M, Akiyoshi, B.
Deposit date:2019-12-03
Release date:2019-12-25
Last modified:2021-06-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Kinetoplastid kinetochore proteins KKT2 and KKT3 have unique centromere localization domains.
J.Cell Biol., 220, 2021
8QOH
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BU of 8qoh by Molmil
Crystal structure of the kinetoplastid kinetochore protein KKT14 C-terminal domain from Apiculatamorpha spiralis
Descriptor: kinetochore protein KKT14
Authors:Carter, W, Ballmer, D, Ishii, M, Ludzia, P, Akiyoshi, B.
Deposit date:2023-09-28
Release date:2024-01-17
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Kinetoplastid kinetochore proteins KKT14-KKT15 are divergent Bub1/BubR1-Bub3 proteins
Biorxiv, 2024
5H6S
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BU of 5h6s by Molmil
Crystal structure of Hydrazidase S179A mutant complexed with a substrate
Descriptor: 4-oxidanylbenzohydrazide, Amidase
Authors:Akiyama, T, Ishii, M, Takuwa, A, Oinuma, K, Sasaki, Y, Takaya, N, Yajima, S.
Deposit date:2016-11-15
Release date:2017-02-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis of the substrate recognition of hydrazidase isolated from Microbacterium sp. strain HM58-2, which catalyzes acylhydrazide compounds as its sole carbon source
Biochem. Biophys. Res. Commun., 482, 2017
6LDX
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BU of 6ldx by Molmil
Structure antibody E6 in complex with methylated peptide
Descriptor: CHLORIDE ION, Fab Heavy chain, Fab light chain, ...
Authors:Caaveiro, J.M.M, Tsumoto, K.
Deposit date:2019-11-23
Release date:2020-11-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for antigen recognition by methylated lysine-specific antibodies.
J.Biol.Chem., 296, 2020
6LDY
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BU of 6ldy by Molmil
Structure antibody D6 in complex with methylated peptide
Descriptor: CALCIUM ION, CHLORIDE ION, Fab heavy chain, ...
Authors:Caaveiro, J.M.M, Tsumoto, K.
Deposit date:2019-11-23
Release date:2020-11-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Structural basis for antigen recognition by methylated lysine-specific antibodies.
J.Biol.Chem., 296, 2020
6LDW
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BU of 6ldw by Molmil
Structure of antibody C9 in complex with methylated peptide
Descriptor: CHLORIDE ION, Fab heavy chain, Fab light chain, ...
Authors:Caaveiro, J.M.M, Tsumoto, K.
Deposit date:2019-11-23
Release date:2020-11-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural basis for antigen recognition by methylated lysine-specific antibodies.
J.Biol.Chem., 296, 2020
6LDV
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BU of 6ldv by Molmil
Structure antibody F9 in complex with methylated peptide
Descriptor: Fab heavy chain, Fab light chain, GLY-M3L-GLY-GLY-THR-TYR-PRO, ...
Authors:Caaveiro, J.M.M, Tsumoto, K.
Deposit date:2019-11-23
Release date:2020-11-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for antigen recognition by methylated lysine-specific antibodies.
J.Biol.Chem., 296, 2020
1NRN
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BU of 1nrn by Molmil
CRYSTALLOGRAPHIC STRUCTURES OF THROMBIN COMPLEXED WITH THROMBIN RECEPTOR PEPTIDES: EXISTENCE OF EXPECTED AND NOVEL BINDING MODES
Descriptor: ALPHA-THROMBIN (LARGE SUBUNIT), ALPHA-THROMBIN (SMALL SUBUNIT), RECEPTOR BASED PEPTIDE NRS
Authors:Tulinsky, A, Mathews, I.I.
Deposit date:1994-01-18
Release date:1994-05-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystallographic structures of thrombin complexed with thrombin receptor peptides: existence of expected and novel binding modes.
Biochemistry, 33, 1994
1NRO
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BU of 1nro by Molmil
CRYSTALLOGRAPHIC STRUCTURES OF THROMBIN COMPLEXED WITH THROMBIN RECEPTOR PEPTIDES: EXISTENCE OF EXPECTED AND NOVEL BINDING MODES
Descriptor: ALPHA-THROMBIN (LARGE SUBUNIT), ALPHA-THROMBIN (SMALL SUBUNIT), RECEPTOR BASED PEPTIDE NRP
Authors:Tulinsky, A, Mathews, I.I.
Deposit date:1994-01-18
Release date:1994-05-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystallographic structures of thrombin complexed with thrombin receptor peptides: existence of expected and novel binding modes.
Biochemistry, 33, 1994
1NRP
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BU of 1nrp by Molmil
CRYSTALLOGRAPHIC STRUCTURES OF THROMBIN COMPLEXED WITH THROMBIN RECEPTOR PEPTIDES: EXISTENCE OF EXPECTED AND NOVEL BINDING MODES
Descriptor: ALPHA-THROMBIN (LARGE SUBUNIT), ALPHA-THROMBIN (SMALL SUBUNIT), RECEPTOR BASED PEPTIDE NR'S
Authors:Tulinsky, A, Mathews, I.I.
Deposit date:1994-01-18
Release date:1994-05-31
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystallographic structures of thrombin complexed with thrombin receptor peptides: existence of expected and novel binding modes.
Biochemistry, 33, 1994
1NRQ
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BU of 1nrq by Molmil
CRYSTALLOGRAPHIC STRUCTURES OF THROMBIN COMPLEXED WITH THROMBIN RECEPTOR PEPTIDES: EXISTENCE OF EXPECTED AND NOVEL BINDING MODES
Descriptor: ALPHA-THROMBIN (LARGE SUBUNIT), ALPHA-THROMBIN (SMALL SUBUNIT), RECEPTOR BASED PEPTIDE D-FPR'S
Authors:Tulinsky, A, Mathews, I.I.
Deposit date:1994-01-18
Release date:1994-05-31
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Crystallographic structures of thrombin complexed with thrombin receptor peptides: existence of expected and novel binding modes.
Biochemistry, 33, 1994
7DC8
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BU of 7dc8 by Molmil
Crystal structure of Switch Ab Fab and hIL6R in complex with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Interleukin-6 receptor subunit alpha, SULFATE ION, ...
Authors:Kadono, S, Fukami, T.A, Kawauchi, H, Torizawa, T, Mimoto, F.
Deposit date:2020-10-23
Release date:2021-01-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.757 Å)
Cite:Exploitation of Elevated Extracellular ATP to Specifically Direct Antibody to Tumor Microenvironment.
Cell Rep, 33, 2020
7DC7
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BU of 7dc7 by Molmil
Crystal structure of D12 Fab-ATP complex
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, D12 Fab heavy chain, D12 Fab light chain
Authors:Kawauchi, H, Fukami, T.A, Tatsumi, K, Torizawa, T, Mimoto, F.
Deposit date:2020-10-23
Release date:2021-01-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Exploitation of Elevated Extracellular ATP to Specifically Direct Antibody to Tumor Microenvironment.
Cell Rep, 33, 2020

 

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