Author results

2ZAM
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CRYSTAL STRUCTURE OF MOUSE SKD1/VPS4B APO-FORM
Descriptor:Vacuolar protein sorting-associating protein 4B
Authors:Inoue, M., Kawasaki, M., Kamikubo, H., Kataoka, M., Kato, R., Yoshimori, T., Wakatsuki, S.
Deposit date:2007-10-08
Release date:2008-10-07
Last modified:2014-01-22
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Nucleotide-dependent conformational changes and assembly of the AAA ATPase SKD1/VPS4B
Traffic, 9, 2008
2ZAN
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CRYSTAL STRUCTURE OF MOUSE SKD1/VPS4B ATP-FORM
Descriptor:Vacuolar protein sorting-associating protein 4B, MAGNESIUM ION, ADENOSINE-5'-TRIPHOSPHATE
Authors:Inoue, M., Kawasaki, M., Kamikubo, H., Kataoka, M., Kato, R., Yoshimori, T., Wakatsuki, S.
Deposit date:2007-10-08
Release date:2008-10-07
Last modified:2014-01-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Nucleotide-dependent conformational changes and assembly of the AAA ATPase SKD1/VPS4B
Traffic, 9, 2008
2ZAO
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CRYSTAL STRUCTURE OF MOUSE SKD1/VPS4B ADP-FORM
Descriptor:Vacuolar protein sorting-associating protein 4B, ADENOSINE-5'-DIPHOSPHATE
Authors:Inoue, M., Kawasaki, M., Kamikubo, H., Kataoka, M., Kato, R., Yoshimori, T., Wakatsuki, S.
Deposit date:2007-10-08
Release date:2008-10-07
Last modified:2014-01-22
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Nucleotide-dependent conformational changes and assembly of the AAA ATPase SKD1/VPS4B
Traffic, 9, 2008
1FNX
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SOLUTION STRUCTURE OF THE HUC RBD1-RBD2 COMPLEXED WITH THE AU-RICH ELEMENT
Descriptor:AU-RICH RNA ELEMENT, HU ANTIGEN C
Authors:Inoue, M., Hirao, M., Kasashima, K., Kim, I.-S., Kawai, G., Kigawa, T., Sakamoto, H., Muto, Y., Yokoyama, S.
Deposit date:2000-08-24
Release date:2003-06-24
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of mouse HuC RNA-binding domains complexed with an AU-Rich element reveals determinants of neuronal differentiation
To be Published, 2000
2DWX
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CO-CRYSTAL STRUCTURE ANALYSIS OF GGA1-GAE WITH THE WNSF MOTIF
Descriptor:ADP-ribosylation factor-binding protein GGA1, hinge peptide from ADP-ribosylation factor binding protein GGA1
Authors:Inoue, M., Shiba, T., Yamada, Y., Ihara, K., Kawasaki, M., Kato, R., Nakayama, K., Wakatsuki, S.
Deposit date:2006-08-21
Release date:2007-04-17
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Molecular Basis for Autoregulatory Interaction Between GAE Domain and Hinge Region of GGA1
Traffic, 8, 2007
2DWY
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CRYSTAL STRUCTURE ANALYSIS OF GGA1-GAE
Descriptor:ADP-RIBOSYLATION FACTOR BINDING PROTEIN GGA1
Authors:Inoue, M., Shiba, T., Yamada, Y., Ihara, K., Kawasaki, M., Kato, R., Nakayama, K., Wakatsuki, S.
Deposit date:2006-08-21
Release date:2007-04-17
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Molecular Basis for Autoregulatory Interaction Between GAE Domain and Hinge Region of GGA1
Traffic, 8, 2007
2SXL
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SEX-LETHAL RBD1, NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor:SEX-LETHAL PROTEIN
Authors:Inoue, M., Muto, Y., Sakamoto, H., Kigawa, T., Takio, K., Shimura, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:1997-07-16
Release date:1998-07-22
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:A characteristic arrangement of aromatic amino acid residues in the solution structure of the amino-terminal RNA-binding domain of Drosophila sex-lethal.
J.Mol.Biol., 272, 1997
1D8Z
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SOLUTION STRUCTURE OF THE FIRST RNA-BINDING DOMAIN (RBD1) OF HU ANTIGEN C (HUC)
Descriptor:HU ANTIGEN C
Authors:Inoue, M., Muto, Y., Sakamoto, H., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:1999-10-26
Release date:2000-04-07
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:NMR studies on functional structures of the AU-rich element-binding domains of Hu antigen C.
Nucleic Acids Res., 28, 2000
1D9A
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SOLUTION STRUCTURE OF THE SECOND RNA-BINDING DOMAIN (RBD2) OF HU ANTIGEN C (HUC)
Descriptor:HU ANTIGEN C
Authors:Inoue, M., Muto, Y., Sakamoto, H., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:1999-10-26
Release date:2000-04-07
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:NMR studies on functional structures of the AU-rich element-binding domains of Hu antigen C.
Nucleic Acids Res., 28, 2000
1IUY
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SOLUTION STRUCTURE OF THE CULLIN-3 HOMOLOGUE
Descriptor:cullin-3 homologue
Authors:Inoue, M., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-03-08
Release date:2003-10-07
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of the cullin-3 homologue
To be published
1IV0
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SOLUTION STRUCTURE OF THE YQGF-FAMILY PROTEIN (N-TERMINAL FRAGMENT)
Descriptor:hypothetical protein
Authors:Inoue, M., Kigawa, T., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-03-08
Release date:2003-10-07
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of the YqgF-family protein (N-terminal fragment)
To be published
5H45
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CRYSTAL STRUCTURE OF THE C-TERMINAL LON PROTEASE-LIKE DOMAIN OF THERMUS THERMOPHILUS RADA/SMS
Descriptor:DNA repair protein RadA
Authors:Inoue, M., Fukui, K., Fujii, Y., Nakagawa, N., Yano, T., Kuramitsu, S., Masui, R.
Deposit date:2016-10-30
Release date:2017-05-03
Last modified:2017-06-21
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The Lon protease-like domain in the bacterial RecA paralog RadA is required for DNA binding and repair.
J. Biol. Chem., 292, 2017
5ZTF
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STRUCTURE OF CA2+ ATPASE
Descriptor:Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, MAGNESIUM ION, ...
Authors:Inoue, M., Watanabe, S., Inaba, K.
Deposit date:2018-05-03
Release date:2019-05-22
Method:X-RAY DIFFRACTION (3.45 Å)
Cite:Structural Basis of Sarco/Endoplasmic Reticulum Ca2+-ATPase 2b Regulation via Transmembrane Helix Interplay.
Cell Rep, 27, 2019
6JJU
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STRUCTURE OF CA2+ ATPASE
Descriptor:Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, MAGNESIUM ION, ...
Authors:Inoue, M., Sakuta, N., Watanabe, S., Inaba, K.
Deposit date:2019-02-27
Release date:2019-05-22
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural Basis of Sarco/Endoplasmic Reticulum Ca2+-ATPase 2b Regulation via Transmembrane Helix Interplay.
Cell Rep, 27, 2019
1UGV
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SOLUTION STRUCTURE OF THE SH3 DOMAIN OF HUMAN OLYGOPHREIN-1 LIKE PROTEIN (KIAA0621)
Descriptor:Olygophrenin-1 like protein
Authors:Inoue, K., Hayashi, F., Shirouzu, M., Terada, T., Kigawa, T., Inoue, M., Yabuki, T., Aoki, M., Seki, E., Matsuda, T., Hirota, H., Yoshida, M., Tanaka, A., Osanai, T., Matsuo, Y., Ohara, O., Nagase, T., Kikuno, R., Nakayama, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-06-20
Release date:2003-12-20
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of the SH3 domain of human olygophrein-1 like protein (KIAA0621)
To be Published
1UHW
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SOLUTION STRUCTURE OF THE DEP DOMAIN OF MOUSE PLECKSTRIN
Descriptor:Pleckstrin
Authors:Inoue, K., Yoshida, M., Hatta, R., Hayashi, F., Shirouzu, M., Terada, T., Kigawa, T., Inoue, M., Yabuki, T., Aoki, M., Seki, E., Matsuda, T., Hirota, H., Tanaka, A., Osanai, T., Matsuo, Y., Arakawa, T., Carninci, P., Kawai, J., Hayashizaki, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-07-11
Release date:2004-01-11
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of the DEP domain of mouse pleckstrin
To be Published
1PE6
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REFINED X-RAY STRUCTURE OF PAPAIN(DOT)E-64-C COMPLEX AT 2.1-ANGSTROMS RESOLUTION
Descriptor:PAPAIN, N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-2-METHYL-BUTANE, METHANOL
Authors:Yamamoto, D., Matsumoto, K., Ohishi, H., Ishida, T., Inoue, M., Kitamura, K., Mizuno, H.
Deposit date:1991-05-14
Release date:1993-04-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Refined x-ray structure of papain.E-64-c complex at 2.1-A resolution.
J.Biol.Chem., 266, 1991
1J26
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SOLUTION STRUCTURE OF A PUTATIVE PEPTIDYL-TRNA HYDROLASE DOMAIN IN A MOUSE HYPOTHETICAL PROTEIN
Descriptor:immature colon carcinoma transcript 1
Authors:Nameki, N., Kigawa, T., Koshiba, S., Kobayashi, N., Tochio, N., Inoue, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-12-25
Release date:2004-06-01
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of the catalytic domain of the mitochondrial protein ICT1 that is essential for cell vitality
J.Mol.Biol., 2010
1VDY
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NMR STRUCTURE OF THE HYPOTHETICAL ENTH-VHS DOMAIN AT3G16270 FROM ARABIDOPSIS THALIANA
Descriptor:hypothetical protein (RAFL09-17-B18)
Authors:Lopez-Mendez, B., Pantoja-Uceda, D., Tomizawa, T., Koshiba, S., Kigawa, T., Shirouzu, M., Terada, T., Inoue, M., Yabuki, T., Aoki, M., Seki, E., Matsuda, T., Hirota, H., Yoshida, M., Tanaka, A., Osanai, T., Seki, M., Shinozaki, K., Yokoyama, S., Guntert, P., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-03-25
Release date:2005-05-03
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of the hypothetical ENTH-VHS domain AT3G16270 from arabidopsis thaliana
To be Published
1VEE
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NMR STRUCTURE OF THE HYPOTHETICAL RHODANESE DOMAIN AT4G01050 FROM ARABIDOPSIS THALIANA
Descriptor:proline-rich protein family
Authors:Pantoja-Uceda, D., Lopez-Mendez, B., Koshiba, S., Inoue, M., Kigawa, T., Terada, T., Shirouzu, M., Tanaka, A., Seki, M., Shinozaki, K., Yokoyama, S., Guntert, P., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-03-30
Release date:2005-01-25
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of the rhodanese homology domain At4g01050(175-295) from Arabidopsis thaliana
Protein Sci., 14, 2005
1WQU
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SOLUTION STRUCTURE OF THE HUMAN FES SH2 DOMAIN
Descriptor:Proto-oncogene tyrosine-protein kinase FES/FPS
Authors:Scott, A., Pantoja-Uceda, D., Koshiba, S., Inoue, M., Kigawa, T., Terada, T., Shirouzu, M., Tanaka, A., Sugano, S., Yokoyama, S., Guntert, P., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-10-02
Release date:2005-06-14
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of the Src homology 2 domain from the human feline sarcoma oncogene Fes
J.Biomol.NMR, 31, 2005
1N27
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SOLUTION STRUCTURE OF THE PWWP DOMAIN OF MOUSE HEPATOMA-DERIVED GROWTH FACTOR, RELATED PROTEIN 3
Descriptor:Hepatoma-derived growth factor, related protein 3
Authors:Nameki, N., Kigawa, T., Koshiba, S., Kobayashi, N., Tochio, N., Inoue, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-10-22
Release date:2003-12-23
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of the PWWP domain of the hepatoma-derived growth factor family.
Protein Sci., 14, 2005
1UDX
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CRYSTAL STRUCTURE OF THE CONSERVED PROTEIN TT1381 FROM THERMUS THERMOPHILUS HB8
Descriptor:the GTP-binding protein Obg, ACETATE ION, (4S)-2-METHYL-2,4-PENTANEDIOL
Authors:Kukimoto-Niino, M., Shirouzu, M., Murayama, K., Inoue, M., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-05-07
Release date:2004-03-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Crystal structure of the GTP-binding protein Obg from Thermus thermophilus HB8.
J.Mol.Biol., 337, 2004
1UFN
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SOLUTION STRUCTURE OF THE SAND DOMAIN OF THE PUTATIVE NUCLEAR PROTEIN HOMOLOG (5830484A20RIK)
Descriptor:putative nuclear protein homolog 5830484A20Rik
Authors:Tochio, N., Kobayashi, N., Koshiba, S., Kigawa, T., Inoue, M., Shirouzu, M., Terada, T., Yabuki, T., Aoki, M., Seki, E., Matsuda, T., Hirota, H., Yoshida, M., Tanaka, A., Osanai, T., Matsuo, Y., Arakawa, T., Carninci, P., Kawai, J., Hayashizaki, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-06-02
Release date:2004-06-22
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of the SAND domain of the putative nuclear protein homolog (5830484A20Rik)
To be Published
1UFW
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SOLUTION STRUCTURE OF RNP DOMAIN IN SYNAPTOJANIN 2
Descriptor:Synaptojanin 2
Authors:He, F., Muto, Y., Ushikoshi, R., Shirouzu, M., Terada, T., Kigawa, T., Inoue, M., Yabuki, T., Aoki, M., Seki, E., Matsuda, T., Hirota, H., Yoshida, M., Kobayashi, N., Tanaka, A., Osanai, T., Matsuo, Y., Ohara, O., Nagase, T., Kikuno, R., Nakayama, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-06-10
Release date:2003-12-10
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of RNP domain in Synaptojanin 2
To be Published