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1ESK
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SOLUTION STRUCTURE OF NCP7 FROM HIV-1
Descriptor:GAG POLYPROTEIN, ZINC ION
Authors:Morellet, N., Demene, H., Teilleux, V., Huynh-Dinh, T., de Rocquigny, H., Fournie-Zaluski, M.-C., Roques, B.P.
Deposit date:2000-04-10
Release date:2000-04-26
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution Structure of (12-53)NCp7 of HIV-1
To be Published
249D
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STRUCTURAL COMPARISON BETWEEN THE D(CTAG) SEQUENCE IN OLIGONUCLEOTIDES AND TRP AND MET REPRESSOR-OPERATOR COMPLEXES
Descriptor:DNA (5'-D(*CP*GP*CP*TP*CP*TP*AP*GP*AP*GP*CP*G)-3'), CALCIUM ION
Authors:Urpi, L., Tereshko, V., Malinina, L., Huynh-Dinh, T., Subirana, J.A.
Deposit date:1996-02-22
Release date:1996-04-19
Last modified:2018-04-18
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural comparison between the d(CTAG) sequence in oligonucleotides and trp and met repressor-operator complexes.
Nat.Struct.Biol., 3, 1996
250D
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STRUCTURAL COMPARISON BETWEEN THE D(CTAG) SEQUENCE IN OLIGONUCLEOTIDES AND TRP AND MET REPRESSOR-OPERATOR COMPLEXES
Descriptor:DNA (5'-D(*CP*GP*CP*TP*AP*GP*CP*G)-3')
Authors:Urpi, L., Tereshko, V., Malinina, L., Huynh-Dinh, T., Subirana, J.A.
Deposit date:1996-02-22
Release date:1996-04-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Structural comparison between the d(CTAG) sequence in oligonucleotides and trp and met repressor-operator complexes.
Nat.Struct.Biol., 3, 1996
192D
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RECOMBINATION-LIKE STRUCTURE OF D(CCGCGG)
Descriptor:DNA (5'-D(*CP*CP*GP*CP*GP*G)-3'), SODIUM ION
Authors:Malinina, L., Urpi, L., Salas, X., Huynh-Dinh, T., Subirana, J.A.
Deposit date:1994-09-22
Release date:1995-02-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Recombination-like structure of d(CCGCGG).
J.Mol.Biol., 243, 1994
1BJ6
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1H NMR OF (12-53) NCP7/D(ACGCC) COMPLEX, 10 STRUCTURES
Descriptor:DNA (5'-D(*AP*CP*GP*CP*C)-3'), NUCLEOCAPSID PROTEIN 7, ZINC ION
Authors:Demene, H., Morellet, N., Teilleux, V., Huynh-Dinh, T., De Rocquigny, H., Fournie-Zaluski, M.C., Roques, B.P.
Deposit date:1998-07-03
Release date:1999-02-02
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structure of the complex between the HIV-1 nucleocapsid protein NCp7 and the single-stranded pentanucleotide d(ACGCC).
J.Mol.Biol., 283, 1998
1GQU
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CRYSTAL STRUCTURE OF AN ALTERNATING A-T OLIGONUCLEOTIDE FRAGMENT WITH HOOGSTEEN BASE PAIRING
Descriptor:DNA (5'(*AP*TP*AP*UP*AP*T)-3')
Authors:Abrescia, N.G.A., Thompson, A., Huynh-Dinh, T., Subirana, J.A.
Deposit date:2001-12-05
Release date:2002-12-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of an Antiparallel DNA Fragment with Hoogsteen Base Pairing
Proc.Natl.Acad.Sci.USA, 99, 2002
1JTJ
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SOLUTION STRUCTURE OF HIV-1LAI MUTATED SL1 HAIRPIN
Descriptor:HIV-1Lai SL1
Authors:Kieken, F., Arnoult, E., Barbault, F., Paquet, F., Huynh-Dinh, T., Paoletti, J., Genest, D., Lancelot, G.
Deposit date:2001-08-21
Release date:2002-12-11
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:HIV-1(Lai) genomic RNA: combined used of NMR and molecular dynamics simulation for studying the structure and internal dynamics of a mutated SL1 hairpin.
EUR.BIOPHYS.J., 31, 2002
1JU0
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NMR SOLUTION STRUCTURE OF A DNA KISSING COMPLEX
Descriptor:5'-D(*CP*TP*TP*GP*CP*TP*GP*AP*AP*GP*CP*GP*CP*GP*CP*AP*CP*GP*GP*CP*AP*AP*G)-3'
Authors:Barbault, F., Huynh-Dinh, T., Paoletti, J., Lancelot, G.
Deposit date:2001-08-23
Release date:2002-08-23
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:A new peculiar DNA structure: NMR solution structure of a DNA kissing complex.
J.Biomol.Struct.Dyn., 19, 2002
1JUA
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SOLUTION STRUCTURE OF THE DEOXYRIBOSE HIV-1LAI INITIATION SEQUENCE STABLE DIMER
Descriptor:5'-D(*CP*TP*TP*GP*CP*TP*GP*AP*AP*GP*CP*GP*CP*GP*CP*AP*CP*GP*GP*CP*AP*AP*G)-3'
Authors:Barbault, F., Huynh-Dinh, T., Paoletti, J., Lancelot, G.
Deposit date:2001-08-24
Release date:2004-01-20
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:A new peculiar DNA structure: NMR solution structure of a DNA kissing complex.
J.Biomol.Struct.Dyn., 19, 2002
2D47
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MOLECULAR STRUCTURE OF A COMPLETE TURN OF A-DNA
Descriptor:DNA (5'-D(*CP*CP*CP*CP*CP*GP*CP*GP*GP*GP*GP*G)-3'), SPERMINE
Authors:Verdaguer, N., Aymami, J., Fernandez-Forner, D., Fita, I., Coll, M., Huynh-Dinh, T., Igolen, J., Subirana, J.A.
Deposit date:1991-10-02
Release date:1991-10-02
Last modified:2018-04-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Molecular structure of a complete turn of A-DNA.
J.Mol.Biol., 221, 1991
446D
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STRUCTURE OF THE OLIGONUCLEOTIDE D(CGTATATACG) AS A SITE SPECIFIC COMPLEX WITH NICKEL IONS
Descriptor:DNA (5'-D(*CP*GP*TP*AP*TP*AP*TP*AP*CP*G)-3'), NICKEL (II) ION
Authors:Abrescia, N.G.A., Malinina, L., Gonzaga, L.F., Huynh-Dinh, T., Neidle, S., Subirana, J.A.
Deposit date:1999-01-15
Release date:1999-03-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of the oligonucleotide d(CGTATATACG) as a site-specific complex with nickel ions.
Nucleic Acids Res., 27, 1999
1G3V
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CRYSTAL STRUCTURE OF NICKEL-D[CGTGTACACG]2
Descriptor:5'-D(*CP*GP*TP*GP*TP*AP*CP*AP*CP*G)-3', NICKEL (II) ION
Authors:Subirana, J.A., Abrescia, N.G.A.
Deposit date:2000-10-25
Release date:2002-01-11
Last modified:2018-01-31
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Nickel-guanine interactions in DNA: crystal structure of nickel-d[CGTGTACACG]2.
J.Biol.Inorg.Chem., 7, 2002
1JU1
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DIMER INITIATION SEQUENCE OF HIV-1LAI GENOMIC RNA: NMR SOLUTION STRUCTURE OF THE EXTENDED DUPLEX
Descriptor:HIV-1Lai SL1
Authors:Girard, F., Barbault, F., Lancelot, G.
Deposit date:2001-08-23
Release date:2002-08-23
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Dimer initiation sequence of HIV-1Lai genomic RNA: NMR solution structure of the extended duplex.
J.Biomol.Struct.Dyn., 16, 1999
399D
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STRUCTURE OF D(CGCCCGCGGGCG)
Descriptor:DNA (5'-D(*CP*GP*CP*CP*CP*GP*CP*GP*GP*GP*CP*G)-3')
Authors:Malinina, L., Fernandez, L.G., Subirana, J.A.
Deposit date:1998-05-11
Release date:1999-01-18
Last modified:2017-05-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of the d(CGCCCGCGGGCG) dodecamer: a kinked A-DNA molecule showing some B-DNA features.
J.Mol.Biol., 285, 1999
426D
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THE STRUCTURE OF MOST STUDIED DNA FRAGMENT CHANGES UNDER THE INFLUENCE OF IONS: A NEW PACKING OF D(CGCGAATTCGCG)
Descriptor:5'-D(CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3', CALCIUM ION
Authors:Liu, J., Malinina, L., Subirana, J.A.
Deposit date:1998-09-17
Release date:1998-11-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:The structure of the most studied DNA fragment changes under the influence of ions: a new packing of d(CGCGAATTCGCG).
FEBS Lett., 438, 1998
1RSB
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X-RAY STUDY OF THE DNA OLIGOMER D(ATATAT) IN P65 SPACE GROUP
Descriptor:5'-D(*AP*TP*AP*TP*AP*T)-3'
Authors:Abrescia, N.G., Gonzalez, C., Gouyette, C., Subirana, J.A.
Deposit date:2003-12-09
Release date:2004-05-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:X-ray and NMR studies of the DNA oligomer d(ATATAT): Hoogsteen base pairing in duplex DNA.
Biochemistry, 43, 2004
2F8W
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CRYSTAL STRUCTURE OF D(CACGTG)2
Descriptor:5'-D(*CP*AP*CP*GP*TP*G)-3', SPERMINE, 1,3-DIAMINOPROPANE
Authors:Narayana, N., Shamala, N., Ganesh, K.N., Viswamitra, M.A.
Deposit date:2005-12-04
Release date:2006-01-31
Last modified:2018-04-18
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Interaction between the Z-Type DNA Duplex and 1,3-Propanediamine: Crystal Structure of d(CACGTG)2 at 1.2 A Resolution
Biochemistry, 45, 2006