Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5KK4
DownloadVisualize
BU of 5kk4 by Molmil
Crystal Structure of the Plant Defensin NsD7 bound to Phosphatidic Acid
Descriptor: (2R)-3-(phosphonooxy)propane-1,2-diyl dihexanoate, 1,2-ETHANEDIOL, ACETATE ION, ...
Authors:Kvansakul, M, Hulett, M.D, Lay, F.T.
Deposit date:2016-06-21
Release date:2016-10-05
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Binding of phosphatidic acid by NsD7 mediates the formation of helical defensin-lipid oligomeric assemblies and membrane permeabilization.
Proc.Natl.Acad.Sci.USA, 113, 2016
4UJ0
DownloadVisualize
BU of 4uj0 by Molmil
Crystal structure of the tomato defensin TPP3
Descriptor: ACETATE ION, FLOWER-SPECIFIC GAMMA-THIONIN-LIKE PROTEIN/ACIDIC PROTEIN
Authors:Richter, V, Lay, F.T, Hulett, M.D, Kvansakul, M.
Deposit date:2015-04-07
Release date:2015-04-15
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Tomato Defensin Tpp3 Binds Phosphatidylinositol (4,5)-Bisphosphate Via a Conserved Dimeric Cationic Grip Conformation to Mediate Cell Lysis.
Mol.Cell.Biol., 35, 2015
4AB0
DownloadVisualize
BU of 4ab0 by Molmil
X-ray crystal structure of Nicotiana alata defensin NaD1
Descriptor: FLOWER-SPECIFIC DEFENSIN, PHOSPHATE ION
Authors:Mills, G.D, Lay, F.T, Hulett, M.D, Kvansakul, M.
Deposit date:2011-12-06
Release date:2012-04-25
Last modified:2012-06-20
Method:X-RAY DIFFRACTION (1.636 Å)
Cite:Dimerization of Plant Defensin Nad1 Enhances its Antifungal Activity.
J.Biol.Chem., 287, 2012
4AAZ
DownloadVisualize
BU of 4aaz by Molmil
X-ray structure of Nicotiana alata Defensin 1 NaD1
Descriptor: 1,2-ETHANEDIOL, FLOWER-SPECIFIC DEFENSIN, PHOSPHATE ION
Authors:Lay, F.T, Mills, G.D, Hulett, M.D, Kvansakul, M.
Deposit date:2011-12-06
Release date:2012-04-25
Last modified:2012-08-08
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Dimerization of Plant Defensin Nad1 Enhances its Antifungal Activity.
J.Biol.Chem., 287, 2012
4CQK
DownloadVisualize
BU of 4cqk by Molmil
Crystal structure of ligand-bound NaD1
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, FLOWER-SPECIFIC DEFENSIN, SULFATE ION, ...
Authors:Lay, F.T, Mills, G.M, Poon, I.K.H, Baxter, A.A, Hulett, M.D, Kvansakul, M.
Deposit date:2014-02-17
Release date:2014-04-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Phosphoinositide-Mediated Oligomerization of a Defensin Induces Cell Lysis.
Elife, 3, 2014
7T9Q
DownloadVisualize
BU of 7t9q by Molmil
Crystal structure of Crocodile defensin CpoBD13
Descriptor: 1,2-ETHANEDIOL, CITRATE ANION, CpoBD13
Authors:Kvansakul, M, Williams, S, Hulett, M.D.
Deposit date:2021-12-19
Release date:2023-01-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crocodile defensin (CpoBD13) antifungal activity via pH-dependent phospholipid targeting and membrane disruption.
Nat Commun, 14, 2023
7T9R
DownloadVisualize
BU of 7t9r by Molmil
Crystal structure of Crocodile defensin CpoBD13:phosphatidic acid complex
Descriptor: (R)-2-(FORMYLOXY)-3-(PHOSPHONOOXY)PROPYL PENTANOATE, 1,2-ETHANEDIOL, CpoBD13, ...
Authors:Kvansakul, M, Williams, S, Hulett, M.D.
Deposit date:2021-12-19
Release date:2023-01-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crocodile defensin (CpoBD13) antifungal activity via pH-dependent phospholipid targeting and membrane disruption.
Nat Commun, 14, 2023
6B55
DownloadVisualize
BU of 6b55 by Molmil
Crystal structure of the Plant Defensin NaD1 complexed with phosphatidic acid
Descriptor: 1,2-DIOCTANOYL-SN-GLYCERO-3-PHOSPHATE, 1,2-ETHANEDIOL, Flower-specific defensin, ...
Authors:Jarva, M, Phan, K, Humble, C, Lay, F.T, Hulett, M, Kvansakul, M.
Deposit date:2017-09-28
Release date:2018-05-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:X-ray structure of a carpet-like antimicrobial defensin-phospholipid membrane disruption complex.
Nat Commun, 9, 2018
6MRY
DownloadVisualize
BU of 6mry by Molmil
NoD173 plant defensin
Descriptor: 1,2-ETHANEDIOL, 5-amino-2,4,6-triiodobenzene-1,3-dicarboxylic acid, CHLORIDE ION, ...
Authors:Caria, S, Kvansakul, M.
Deposit date:2018-10-15
Release date:2019-04-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and functional characterization of the membrane-permeabilizing activity ofNicotiana occidentalisdefensin NoD173 and protein engineering to enhance oncolysis.
Faseb J., 33, 2019
6CS9
DownloadVisualize
BU of 6cs9 by Molmil
Crystal structure of human beta-defensin 2 in complex with PIP2
Descriptor: Beta-defensin 4A, [(2R)-2-octanoyloxy-3-[oxidanyl-[(1R,2R,3S,4R,5R,6S)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] octanoate
Authors:Jarva, M, Phan, K, Lay, F.T, Humble, C, Hulett, M, Kvansakul, M.
Deposit date:2018-03-20
Release date:2018-07-25
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Human beta-defensin 2 killsCandida albicansthrough phosphatidylinositol 4,5-bisphosphate-mediated membrane permeabilization.
Sci Adv, 4, 2018
5VYP
DownloadVisualize
BU of 5vyp by Molmil
Crystal structure of the Plant Defensin NsD7 bound to PIP2
Descriptor: Defensin NsD7, GLYCEROL, SULFATE ION, ...
Authors:Jarva, M, Lay, F.T, Hulett, M, Kvansakul, M.
Deposit date:2017-05-25
Release date:2017-08-02
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of the defensin NsD7 in complex with PIP2 reveals that defensin : lipid oligomer topologies are dependent on lipid type.
FEBS Lett., 591, 2017
7MDS
DownloadVisualize
BU of 7mds by Molmil
Crystal structure of AtDHDPS1 in complex with MBDTA-2
Descriptor: 4-hydroxy-tetrahydrodipicolinate synthase 1, chloroplastic, CHLORIDE ION, ...
Authors:Hall, C.J, Soares da Costa, T.P, Panjikar, S.
Deposit date:2021-04-06
Release date:2021-08-04
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.295 Å)
Cite:Towards novel herbicide modes of action by inhibiting lysine biosynthesis in plants.
Elife, 10, 2021
1FCG
DownloadVisualize
BU of 1fcg by Molmil
ECTODOMAIN OF HUMAN FC GAMMA RECEPTOR, FCGRIIA
Descriptor: PROTEIN (FC RECEPTOR FC(GAMMA)RIIA)
Authors:Maxwell, K.F, Powell, M.S, Garrett, T.P, Hogarth, P.M.
Deposit date:1999-04-07
Release date:2000-04-12
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the human leukocyte Fc receptor, Fc gammaRIIa.
Nat.Struct.Biol., 6, 1999
5WOS
DownloadVisualize
BU of 5wos by Molmil
Structural and functional insights into Canarypox Virus CNP058 regulation of apoptosis
Descriptor: Bcl-2-like protein 11, CNPV058 bcl-2 like protein
Authors:Anasir, M.I, Kvansakul, M.
Deposit date:2017-08-02
Release date:2017-11-01
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structural and Functional Insight into Canarypox Virus CNP058 Mediated Regulation of Apoptosis.
Viruses, 9, 2017
6DMZ
DownloadVisualize
BU of 6dmz by Molmil
Solution structure of ZmD32
Descriptor: Flower-specific gamma-thionin
Authors:Harvey, P.J, Craik, D.J.
Deposit date:2018-06-05
Release date:2019-05-15
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Salt-Tolerant Antifungal and Antibacterial Activities of the Corn Defensin ZmD32.
Front Microbiol, 10, 2019
7T34
DownloadVisualize
BU of 7t34 by Molmil
Crystal structure of AtDHDPR1 from Arabidopsis thaliana
Descriptor: 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic
Authors:Mackie, E.R.R, Panjikar, S, Soares da Costa, T.P.
Deposit date:2021-12-06
Release date:2022-12-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:From bacteria to plants: a repurposing strategy in the pursuit for novel herbicides
To be published

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon