Author results

5JDK
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CRYSTAL STRUCTURE OF THE DNA BINDING DOMAIN OF SAP1 IN FISSION YEAST S.POMBE
Descriptor:Switch-activating protein 1, GLYCEROL
Authors:He, P., Wang, T.
Deposit date:2016-04-17
Release date:2017-02-22
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (0.998 Å)
Cite:Sap1 is a replication-initiation factor essential for the assembly of pre-replicative complex in the fission yeast Schizosaccharomyces pombe.
J. Biol. Chem., 292, 2017
4OD6
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STRUCTURE OF SMR DOMAIN OF MUTS2 FROM DEINOCOCCUS RADIODURANS, MN2+ SOAKED
Descriptor:Endonuclease MutS2
Authors:Zhang, H., Zhao, Y., Xu, Q., Hua, Y.J.
Deposit date:2014-01-10
Release date:2014-06-25
Last modified:2014-08-20
Method:X-RAY DIFFRACTION (1.199 Å)
Cite:Structural and functional studies of MutS2 from Deinococcus radiodurans.
Dna Repair, 21, 2014
4OCH
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APO STRUCTURE OF SMR DOMAIN OF MUTS2 FROM DEINOCOCCUS RADIODURANS
Descriptor:Endonuclease MutS2, GLYCEROL
Authors:Zhang, H., Zhao, Y., Xu, Q., Hua, Y.J.
Deposit date:2014-01-09
Release date:2014-06-25
Last modified:2014-08-20
Method:X-RAY DIFFRACTION (1.4001 Å)
Cite:Structural and functional studies of MutS2 from Deinococcus radiodurans.
Dna Repair, 21, 2014
5H7E
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CRYSTAL STRUCTURE OF NATIVE DRCPDASE
Descriptor:RNA 2',3'-cyclic phosphodiesterase, GLYCEROL, SULFATE ION
Authors:Han, W., Hua, Y., Zhao, Y.
Deposit date:2016-11-18
Release date:2017-09-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of the RNA 2',3'-cyclic phosphodiesterase from Deinococcus radiodurans
Acta Crystallogr F Struct Biol Commun, 73, 2017
5H7F
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CRYSTAL STRUCTURE OF MN-DERIVATIVE DRCPDASE
Descriptor:RNA 2',3'-cyclic phosphodiesterase, SULFATE ION
Authors:Han, W., Hua, Y., Zhao, Y.
Deposit date:2016-11-18
Release date:2017-11-22
Method:X-RAY DIFFRACTION (1.601 Å)
Cite:Crystal Structure of Mn-derivative drCPDase
To be published
5BVU
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CRYSTAL STRUCTURE OF THERMOANAEROBACTERIUM XYLOLYTICUM GH116 BETA-GLUCOSIDASE
Descriptor:beta-glucosidase, GLYCEROL, CALCIUM ION, ...
Authors:Charoenwattanasatien, R., Pengthaisong, S., Sansenya, S., Mutoh, R., Tanaka, H., Kurisu, G., Ketudat Cairns, J.R.
Deposit date:2015-06-05
Release date:2016-05-18
Last modified:2016-07-27
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Bacterial beta-Glucosidase Reveals the Structural and Functional Basis of Genetic Defects in Human Glucocerebrosidase 2 (GBA2).
Acs Chem.Biol., 11, 2016
5BX2
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CRYSTAL STRUCTURE OF THERMOANAEROBACTERIUM XYLANOLYTICUM GH116 BETA-GLUCOSIDASE WITH 2-DEOXY-2-FLUOROGLUCOSIDE
Descriptor:beta-glucosidase, 2-deoxy-2-fluoro-alpha-D-glucopyranose, GLYCEROL, ...
Authors:Charoenwattanasatien, R., Pengthaisong, S., Sansenya, S., Mutoh, R., Tanaka, H., Kurisu, G., Ketudat Cairns, J.R.
Deposit date:2015-06-08
Release date:2016-05-18
Last modified:2016-07-27
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Bacterial beta-Glucosidase Reveals the Structural and Functional Basis of Genetic Defects in Human Glucocerebrosidase 2 (GBA2)
Acs Chem.Biol., 11, 2016
5BX4
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CRYSTAL STRUCTURE OF THERMOANAEROBACTERIUM XYLANOLYTICUM GH116 BETA-GLUCOSIDASE WITH GLUCOIMIDAZOLE
Descriptor:beta-glucosidase, GLUCOIMIDAZOLE, GLYCEROL, ...
Authors:Charoenwattanasatien, R., Pengthaisong, S., Sansenya, S., Mutoh, R., Tankrathok, A., Tanaka, H., Kurisu, G., Ketudat Cairns, J.R.
Deposit date:2015-06-08
Release date:2016-05-18
Last modified:2016-07-27
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Bacterial beta-Glucosidase Reveals the Structural and Functional Basis of Genetic Defects in Human Glucocerebrosidase 2 (GBA2)
Acs Chem.Biol., 11, 2016
4XWW
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CRYSTAL STRUCTURE OF RNASE J COMPLEXED WITH RNA
Descriptor:DR2417, RNA (5'-D(UP*UP*UP*UP*UP*UP*U)-3'), ZINC ION, ...
Authors:Lu, M., Zhang, H., Xu, Q., Hua, Y., Zhao, Y.
Deposit date:2015-01-29
Release date:2015-12-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural insights into catalysis and dimerization enhanced exonuclease activity of RNase J
Nucleic Acids Res., 43, 2015
4JM4
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CRYSTAL STRUCTURE OF PGT 135 FAB
Descriptor:PGT 135 Heavy Chain, PGT 135 Light Chain
Authors:Kong, L., Wilson, I.A.
Deposit date:2013-03-13
Release date:2013-05-29
Last modified:2013-07-17
Method:X-RAY DIFFRACTION (1.751 Å)
Cite:Supersite of immune vulnerability on the glycosylated face of HIV-1 envelope glycoprotein gp120.
Nat.Struct.Mol.Biol., 20, 2013
4J9L
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HUMAN DNA POLYMERASE ETA-DNA TERNARY COMPLEX: MISINCORPORATION G OPPOSITE T AFTER A C AT THE PRIMER 3' END (CA/G)
Descriptor:DNA polymerase eta, DNA, MAGNESIUM ION, ...
Authors:Zhao, Y., Gregory, M., Biertumpfel, C., Hua, Y., Hanaoka, F., Yang, W.
Deposit date:2013-02-16
Release date:2013-05-01
Last modified:2013-08-28
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Mechanism of somatic hypermutation at the WA motif by human DNA polymerase eta.
Proc.Natl.Acad.Sci.USA, 110, 2013
5BX5
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CRYSTAL STRUCTURE OF THERMOANAEROBACTERIUM XYLANOLYTICUM GH116 BETA-GLUCOSIDASE WITH GLUCOSE
Descriptor:beta-glucosidase, BETA-D-GLUCOSE, GLYCEROL, ...
Authors:Charoenwattanasatien, R., Pengthaisong, S., Sansenya, S., Mutoh, R., Hua, Y., Tanaka, H., Kurisu, G., Ketudat Cairns, J.R.
Deposit date:2015-06-08
Release date:2016-05-18
Last modified:2016-07-27
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Bacterial beta-Glucosidase Reveals the Structural and Functional Basis of Genetic Defects in Human Glucocerebrosidase 2 (GBA2)
Acs Chem.Biol., 11, 2016
3H47
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X-RAY STRUCTURE OF HEXAMERIC HIV-1 CA
Descriptor:Capsid protein p24
Authors:Pornillos, O.
Deposit date:2009-04-18
Release date:2009-06-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:X-ray structures of the hexameric building block of the HIV capsid.
Cell(Cambridge,Mass.), 137, 2009
3MGE
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X-RAY STRUCTURE OF HEXAMERIC HIV-1 CA
Descriptor:Capsid protein p24, 1,2-ETHANEDIOL
Authors:Pornillos, O.
Deposit date:2010-04-05
Release date:2010-07-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Disulfide Bond Stabilization of the Hexameric Capsomer of Human Immunodeficiency Virus.
J.Mol.Biol., 401, 2010
3WBA
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RICE OS3BGLU6 E178Q WITH COVALENT GLUCOSYL MOIETY FROM P-NITROPHENYL GLUCOPYRANOSIDE.
Descriptor:Beta-glucosidase 6, ALPHA-D-GLUCOSE, GLYCEROL
Authors:Sansenya, S., Hua, Y., Cairns, J.R.K.
Deposit date:2013-05-14
Release date:2013-09-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Enzymatic and structural characterization of hydrolysis of gibberellin A4 glucosyl ester by a rice beta-d-glucosidase
Arch.Biochem.Biophys., 537, 2013
5ZOD
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CRYSTAL STRUCTURE OF HFEN1 IN APO FORM
Descriptor:Flap endonuclease 1, MAGNESIUM ION, POTASSIUM ION
Authors:Han, W., Hua, Y., Zhao, Y.
Deposit date:2018-04-13
Release date:2019-01-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis of 5' flap recognition and protein-protein interactions of human flap endonuclease 1.
Nucleic Acids Res., 46, 2018
4J9S
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HUMAN DNA POLYMERASE ETA-DNA TRANSLOCATED BINARY COMPLEX: WITH TA BASE PAIR
Descriptor:DNA polymerase eta, DNA (5'-D(*T*AP*TP*TP*TP*AP*TP*GP*AP*CP*GP*T)-3'), DNA (5'-D(*TP*AP*CP*GP*TP*CP*AP*TP*A)-3'), ...
Authors:Zhao, Y., Gregory, M., Biertumpfel, C., Hua, Y., Hanaoka, F., Yang, W.
Deposit date:2013-02-16
Release date:2013-05-01
Last modified:2013-08-28
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Mechanism of somatic hypermutation at the WA motif by human DNA polymerase eta.
Proc.Natl.Acad.Sci.USA, 110, 2013
5ZOE
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CRYSTAL STRUCTURE OF D181A HFEN1 IN COMPLEX WITH DNA
Descriptor:Flap endonuclease 1, DNA (5'-D(*CP*CP*TP*CP*TP*GP*CP*CP*TP*CP*AP*AP*GP*AP*CP*GP*GP*G)-3'), DNA (5'-D(*GP*CP*CP*CP*GP*TP*CP*C)-3'), ...
Authors:Han, W., Hua, Y., Zhao, Y.
Deposit date:2018-04-13
Release date:2019-01-30
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural basis of 5' flap recognition and protein-protein interactions of human flap endonuclease 1.
Nucleic Acids Res., 46, 2018
4J9N
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HUMAN DNA POLYMERASE ETA-DNA TERNARY COMPLEX: MISINCORPORATION G OPPOSITE T AFTER A G AT THE PRIMER 3' END (GA/G)
Descriptor:DNA polymerase eta, DNA, MAGNESIUM ION, ...
Authors:Zhao, Y., Gregory, M., Biertumpfel, C., Hua, Y., Hanaoka, F., Yang, W.
Deposit date:2013-02-16
Release date:2013-05-01
Last modified:2013-08-28
Method:X-RAY DIFFRACTION (1.956 Å)
Cite:Mechanism of somatic hypermutation at the WA motif by human DNA polymerase eta.
Proc.Natl.Acad.Sci.USA, 110, 2013
4J9Q
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HUMAN DNA POLYMERASE ETA-DNA POSTINSERTION BINARY COMPLEX WITH TG MISPAIR
Descriptor:DNA polymerase eta, DNA (5'-D(*TP*C*AP*TP*TP*AP*TP*GP*AP*CP*GP*CP*T)-3'), DNA (5'-D(*TP*AP*GP*CP*GP*TP*CP*AP*TP*G)-3'), ...
Authors:Zhao, Y., Gregory, M., Biertumpfel, C., Hua, Y., Hanaoka, F., Yang, W.
Deposit date:2013-02-16
Release date:2013-05-01
Last modified:2013-08-28
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Mechanism of somatic hypermutation at the WA motif by human DNA polymerase eta.
Proc.Natl.Acad.Sci.USA, 110, 2013
5BX3
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CRYSTAL STRUCTURE OF THERMOANAEROBACTERIUM XYLANOLYTICUM GH116 BETA-GLUCOSIDASE WITH DEOXYNOJIRIMYCIN
Descriptor:beta-glucosidase, 1-DEOXYNOJIRIMYCIN, GLYCEROL, ...
Authors:Charoenwattanasatien, R., Pengthaisong, S., Sansenya, S., Mutoh, R., Tankrathok, A., Tanaka, H., Kurisu, G., Ketudat Cairns, J.R.
Deposit date:2015-06-08
Release date:2016-05-18
Last modified:2016-07-27
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Bacterial beta-Glucosidase Reveals the Structural and Functional Basis of Genetic Defects in Human Glucocerebrosidase 2 (GBA2)
Acs Chem.Biol., 11, 2016
3WBE
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RICE OS3BGLU6 BETA-GLUCOSIDASE E178Q MUTANT IN A COVALENT COMPLEX WITH GLC FROM GA4GE.
Descriptor:Beta-glucosidase 6, ALPHA-D-GLUCOSE, GLYCEROL
Authors:Sansenya, S., Hua, Y., Cairns, J.R.K.
Deposit date:2013-05-14
Release date:2013-09-04
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Enzymatic and structural characterization of hydrolysis of gibberellin A4 glucosyl ester by a rice beta-d-glucosidase
Arch.Biochem.Biophys., 537, 2013
4DL7
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HUMAN DNA POLYMERASE ETA FAILS TO EXTEND PRIMER 2 NUCLEOTIDE AFTER CISPLATIN CROSSLINK (PT-GG4).
Descriptor:DNA polymerase eta, DNA (5'-D(*TP*AP*CP*TP*CP*GP*GP*TP*CP*AP*CP*T)-3'), DNA (5'-D(*TP*AP*GP*TP*GP*AP*CP*CP*G)-3'), ...
Authors:Zhao, Y., Biertumpfel, C., Gregory, M., Hua, Y., Hanaoka, F., Yang, W.
Deposit date:2012-02-05
Release date:2012-05-09
Last modified:2013-07-17
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structural Basis for Chemoresistance to Cisplatin Mediated by DNA Polymerase eta
Proc.Natl.Acad.Sci.USA, 109, 2012
4XWT
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CRYSTAL STRUCTURE OF RNASE J COMPLEXED WITH UMP
Descriptor:DR2417, ZINC ION, MANGANESE (II) ION, ...
Authors:Lu, M., Zhang, H., Xu, Q., Hua, Y., Zhao, Y.
Deposit date:2015-01-29
Release date:2015-12-16
Method:X-RAY DIFFRACTION (2.003 Å)
Cite:Structural insights into catalysis and dimerization enhanced exonuclease activity of RNase J
Nucleic Acids Res., 43, 2015
4J9K
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HUMAN DNA POLYMERASE ETA-DNA TERNARY COMPLEX: MISINCORPORATION G OPPOSITE T AFTER A T AT THE PRIMER 3' END (TA/G)
Descriptor:DNA polymerase eta, DNA, MAGNESIUM ION, ...
Authors:Zhao, Y., Gregory, M., Biertumpfel, C., Hua, Y., Hanaoka, F., Yang, W.
Deposit date:2013-02-16
Release date:2013-05-01
Last modified:2013-08-28
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Mechanism of somatic hypermutation at the WA motif by human DNA polymerase eta.
Proc.Natl.Acad.Sci.USA, 110, 2013
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