Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1BHU
DownloadVisualize
BU of 1bhu by Molmil
THE 3D STRUCTURE OF THE STREPTOMYCES METALLOPROTEINASE INHIBITOR, SMPI, ISOLATED FROM STREPTOMYCES NIGRESCENS TK-23, NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor: METALLOPROTEINASE INHIBITOR
Authors:Tate, S, Ohno, A, Seeram, S.S, Hiraga, K, Oda, K, Kainosho, M.
Deposit date:1998-06-10
Release date:1999-01-06
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:NMR structure of the Streptomyces metalloproteinase inhibitor, SMPI, isolated from Streptomyces nigrescens TK-23: another example of an ancestral beta gamma-crystallin precursor structure.
J.Mol.Biol., 282, 1998
1F53
DownloadVisualize
BU of 1f53 by Molmil
NMR STRUCTURE OF KILLER TOXIN-LIKE PROTEIN SKLP
Descriptor: YEAST KILLER TOXIN-LIKE PROTEIN
Authors:Ohki, S, Kariya, E, Hiraga, K, Wakamiya, A, Isobe, T, Oda, K, Kainosho, M.
Deposit date:2000-06-12
Release date:2000-12-27
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:NMR structure of Streptomyces killer toxin-like protein, SKLP: further evidence for the wide distribution of single-domain betagamma-crystallin superfamily proteins.
J.Mol.Biol., 305, 2001
5H6M
DownloadVisualize
BU of 5h6m by Molmil
DNA targeting ADP-ribosyltransferase Pierisin-1
Descriptor: 1,2-ETHANEDIOL, Pierisin-1
Authors:Oda, T, Hirabayashi, H, Shikauchi, G, Takamura, R, Hiraga, K, Minami, H, Hashimoto, H, Yamamoto, M, Wakabayashi, K, Sugimura, T, Shimizu, T, Sato, M.
Deposit date:2016-11-14
Release date:2017-08-09
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis of autoinhibition and activation of the DNA-targeting ADP-ribosyltransferase pierisin-1
J. Biol. Chem., 292, 2017
5H6J
DownloadVisualize
BU of 5h6j by Molmil
DNA targeting ADP-ribosyltransferase Pierisin-1 in complex with beta-NAD+
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Pierisin-1
Authors:Oda, T, Hirabayashi, H, Shikauchi, G, Takamura, R, Hiraga, K, Minami, H, Hashimoto, H, Yamamoto, M, Wakabayashi, K, Sugimura, T, Shimizu, T, Sato, M.
Deposit date:2016-11-14
Release date:2017-08-09
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis of autoinhibition and activation of the DNA-targeting ADP-ribosyltransferase pierisin-1
J. Biol. Chem., 292, 2017
5H6K
DownloadVisualize
BU of 5h6k by Molmil
DNA targeting ADP-ribosyltransferase Pierisin-1
Descriptor: 1,2-ETHANEDIOL, Pierisin-1
Authors:Oda, T, Hirabayashi, H, Shikauchi, G, Takamura, R, Hiraga, K, Minami, H, Hashimoto, H, Yamamoto, M, Wakabayashi, K, Sugimura, T, Shimizu, T, Sato, M.
Deposit date:2016-11-14
Release date:2017-08-09
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis of autoinhibition and activation of the DNA-targeting ADP-ribosyltransferase pierisin-1
J. Biol. Chem., 292, 2017
5H6N
DownloadVisualize
BU of 5h6n by Molmil
DNA targeting ADP-ribosyltransferase Pierisin-1, autoinhibitory form
Descriptor: Pierisin-1
Authors:Oda, T, Hirabayashi, H, Shikauchi, G, Takamura, R, Hiraga, K, Minami, H, Hashimoto, H, Yamamoto, M, Wakabayashi, K, Sugimura, T, Shimizu, T, Sato, M.
Deposit date:2016-11-14
Release date:2017-08-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis of autoinhibition and activation of the DNA-targeting ADP-ribosyltransferase pierisin-1
J. Biol. Chem., 292, 2017
5H6L
DownloadVisualize
BU of 5h6l by Molmil
DNA targeting ADP-ribosyltransferase Pierisin-1 in complex with beta-NAD+
Descriptor: 1,2-ETHANEDIOL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Pierisin-1
Authors:Oda, T, Hirabayashi, H, Shikauchi, G, Takamura, R, Hiraga, K, Minami, H, Hashimoto, H, Yamamoto, M, Wakabayashi, K, Sugimura, T, Shimizu, T, Sato, M.
Deposit date:2016-11-14
Release date:2017-08-09
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis of autoinhibition and activation of the DNA-targeting ADP-ribosyltransferase pierisin-1
J. Biol. Chem., 292, 2017
2IFW
DownloadVisualize
BU of 2ifw by Molmil
Crystal structure of scytalido-glutamic peptidase with a transition state analog inhibitor
Descriptor: ACETIC ACID, GLYCEROL, Heptapeptide, ...
Authors:Pillai, B, Cherney, M.M, Hiraga, K, Takada, K, Oda, K, James, M.N.
Deposit date:2006-09-21
Release date:2006-10-03
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of scytalidoglutamic peptidase with its first potent inhibitor provides insights into substrate specificity and catalysis.
J.Mol.Biol., 365, 2007
2IFR
DownloadVisualize
BU of 2ifr by Molmil
Crystal structure of Scytalido-glutamic peptidase with a peptide based transition state analog
Descriptor: ACETIC ACID, Octapeptide, Scytalidopepsin B
Authors:Pillai, B, Cherney, M.M, Hiraga, K, Takada, K, Oda, K, James, M.N.
Deposit date:2006-09-21
Release date:2006-10-03
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of scytalidoglutamic peptidase with its first potent inhibitor provides insights into substrate specificity and catalysis.
J.Mol.Biol., 365, 2007
3IFJ
DownloadVisualize
BU of 3ifj by Molmil
Crystal structure of Mtu recA intein, splicing domain
Descriptor: Endonuclease PI-MtuI, ZINC ION
Authors:Van Roey, P, Belfort, M.
Deposit date:2009-07-24
Release date:2009-10-06
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Selection and structure of hyperactive inteins: peripheral changes relayed to the catalytic center.
J.Mol.Biol., 393, 2009
3IGD
DownloadVisualize
BU of 3igd by Molmil
Crystal structure of Mtu recA intein, splicing domain
Descriptor: Endonuclease PI-MtuI, ZINC ION
Authors:Van Roey, P, Belfort, M.
Deposit date:2009-07-27
Release date:2009-10-06
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Selection and structure of hyperactive inteins: peripheral changes relayed to the catalytic center.
J.Mol.Biol., 393, 2009
7MHC
DownloadVisualize
BU of 7mhc by Molmil
Structure of human STING in complex with MK-1454
Descriptor: (2R,5R,7R,8S,10R,12aR,14R,15S,15aR,16R)-7-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)-14-(6-amino-9H-purin-9-yl)-15,16-difluoro-2,10-bis(sulfanyl)octahydro-2H,10H,12H-5,8-methano-2lambda~5~,10lambda~5~-furo[3,2-l][1,3,6,9,11,2,10]pentaoxadiphosphacyclotetradecine-2,10-dione, Stimulator of interferon genes protein
Authors:Lesburg, C.A.
Deposit date:2021-04-15
Release date:2022-04-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:A kinase-cGAS cascade to synthesize a therapeutic STING activator.
Nature, 603, 2022
8HX9
DownloadVisualize
BU of 8hx9 by Molmil
Crystal structure of 4-amino-4-deoxychorismate synthase from Streptomyces venezuelae with chorismate
Descriptor: (3R,4R)-3-[(1-carboxyethenyl)oxy]-4-hydroxycyclohexa-1,5-diene-1-carboxylic acid, 4-amino-4-deoxychorismate synthase, FORMIC ACID, ...
Authors:Nakamichi, Y, Watanabe, M.
Deposit date:2023-01-04
Release date:2023-10-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Structural basis for the allosteric pathway of 4-amino-4-deoxychorismate synthase.
Acta Crystallogr D Struct Biol, 79, 2023
8HX6
DownloadVisualize
BU of 8hx6 by Molmil
Crystal structure of 4-amino-4-deoxychorismate synthase from Streptomyces venezuelae
Descriptor: 4-amino-4-deoxychorismate synthase, D-MALATE, MAGNESIUM ION, ...
Authors:Nakamichi, Y, Watanabe, M.
Deposit date:2023-01-04
Release date:2023-10-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Structural basis for the allosteric pathway of 4-amino-4-deoxychorismate synthase.
Acta Crystallogr D Struct Biol, 79, 2023
8HX8
DownloadVisualize
BU of 8hx8 by Molmil
Crystal structure of 4-amino-4-deoxychorismate synthase from Streptomyces venezuelae co-crystallized with chorismate
Descriptor: 4-amino-4-deoxychorismate synthase, MAGNESIUM ION, SUCCINIC ACID, ...
Authors:Nakamichi, Y, Watanabe, M.
Deposit date:2023-01-04
Release date:2023-10-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structural basis for the allosteric pathway of 4-amino-4-deoxychorismate synthase.
Acta Crystallogr D Struct Biol, 79, 2023
8HX7
DownloadVisualize
BU of 8hx7 by Molmil
Crystal structure of 4-amino-4-deoxychorismate synthase from Streptomyces venezuelae co-crystallized with L-glutamine
Descriptor: 4-amino-4-deoxychorismate synthase, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Nakamichi, Y, Watanabe, M.
Deposit date:2023-01-04
Release date:2023-10-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural basis for the allosteric pathway of 4-amino-4-deoxychorismate synthase.
Acta Crystallogr D Struct Biol, 79, 2023
2IN0
DownloadVisualize
BU of 2in0 by Molmil
crystal structure of Mtu recA intein splicing domain
Descriptor: Endonuclease PI-MtuI
Authors:Van Roey, P.
Deposit date:2006-10-05
Release date:2007-05-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystallographic and mutational studies of Mycobacterium tuberculosis recA mini-inteins suggest a pivotal role for a highly conserved aspartate residue.
J.Mol.Biol., 367, 2007
2IN9
DownloadVisualize
BU of 2in9 by Molmil
crystal structure of Mtu recA intein, splicing domain
Descriptor: Endonuclease PI-MtuI, SULFATE ION
Authors:Van Roey, P.
Deposit date:2006-10-06
Release date:2007-05-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystallographic and mutational studies of Mycobacterium tuberculosis recA mini-inteins suggest a pivotal role for a highly conserved aspartate residue.
J.Mol.Biol., 367, 2007
2IMZ
DownloadVisualize
BU of 2imz by Molmil
Crystal structure of Mtu recA intein splicing domain
Descriptor: Endonuclease PI-MtuI, ZINC ION
Authors:Van Roey, P.
Deposit date:2006-10-05
Release date:2007-05-01
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystallographic and mutational studies of Mycobacterium tuberculosis recA mini-inteins suggest a pivotal role for a highly conserved aspartate residue.
J.Mol.Biol., 367, 2007
2IN8
DownloadVisualize
BU of 2in8 by Molmil
crystal structure of Mtu recA intein, splicing domain
Descriptor: Endonuclease PI-MtuI, SULFATE ION
Authors:Van Roey, P.
Deposit date:2006-10-06
Release date:2007-05-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystallographic and mutational studies of Mycobacterium tuberculosis recA mini-inteins suggest a pivotal role for a highly conserved aspartate residue.
J.Mol.Biol., 367, 2007

218500

PDB entries from 2024-04-17

PDB statisticsPDBj update infoContact PDBjnumon