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4YHZ
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BU of 4yhz by Molmil
Crystal structure of 304M3-B Fab in complex with H3K4me3 peptide
Descriptor: Fab Heavy Chain, Fab Light Chain, GLYCEROL, ...
Authors:Hattori, T, Dementieva, I.S, Montano, S.P, Koide, S.
Deposit date:2015-02-27
Release date:2016-02-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.304 Å)
Cite:Antigen clasping by two antigen-binding sites of an exceptionally specific antibody for histone methylation.
Proc.Natl.Acad.Sci.USA, 113, 2016
4YHY
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BU of 4yhy by Molmil
Crystal structure of 309M3-B in complex with trimethylated Lys
Descriptor: Fab Heavy Chain, Fab Light Chain, N-TRIMETHYLLYSINE
Authors:Hattori, T, Dementieva, I.S, Montano, S.P, Koide, S.
Deposit date:2015-02-27
Release date:2016-02-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Antigen clasping by two antigen-binding sites of an exceptionally specific antibody for histone methylation.
Proc.Natl.Acad.Sci.USA, 113, 2016
4YHP
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BU of 4yhp by Molmil
Crystal structure of 309M3-B Fab in complex with H3K9me3 peptide
Descriptor: Fab Heavy Chain, Fab Light Chain, H3K9me3 peptide
Authors:Hattori, T, Dementieva, I.S, Montano, S.P, Koide, S.
Deposit date:2015-02-27
Release date:2016-02-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:Antigen clasping by two antigen-binding sites of an exceptionally specific antibody for histone methylation.
Proc.Natl.Acad.Sci.USA, 113, 2016
8EZG
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BU of 8ezg by Molmil
Monobody 12D1 bound to KRAS(G12D)
Descriptor: GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Hattori, T, Glasser, E, Akkapeddi, P, Ketavarapu, G, Teng, K.W, Koide, A, Koide, S.
Deposit date:2022-10-31
Release date:2023-07-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Exploring switch II pocket conformation of KRAS(G12D) with mutant-selective monobody inhibitors.
Proc.Natl.Acad.Sci.USA, 120, 2023
8F0M
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BU of 8f0m by Molmil
Monobody 12D5 bound to KRAS(G12D)
Descriptor: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, GUANOSINE-5'-DIPHOSPHATE, Isoform 2B of GTPase KRas, ...
Authors:Hattori, T, Glasser, E, Akkapeddi, P, Ketavarapu, G, Teng, K.W, Koide, A, Koide, S.
Deposit date:2022-11-03
Release date:2023-07-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Exploring switch II pocket conformation of KRAS(G12D) with mutant-selective monobody inhibitors.
Proc.Natl.Acad.Sci.USA, 120, 2023
7L0F
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BU of 7l0f by Molmil
Monobody 12VC3 Bound to HRAS(WT)
Descriptor: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, GTPase HRas, MAGNESIUM ION, ...
Authors:Teng, K.W, Hattori, T, Tsai, S, Koide, S.
Deposit date:2020-12-11
Release date:2021-03-24
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Selective and noncovalent targeting of RAS mutants for inhibition and degradation.
Nat Commun, 12, 2021
7L0G
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BU of 7l0g by Molmil
Monobody 12VC1 Bound to HRAS(G12C)
Descriptor: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, GTPase HRas, MAGNESIUM ION, ...
Authors:Teng, K.W, Hattori, T, Tsai, S, Koide, S.
Deposit date:2020-12-11
Release date:2021-03-24
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Selective and noncovalent targeting of RAS mutants for inhibition and degradation.
Nat Commun, 12, 2021
7SFX
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BU of 7sfx by Molmil
10A1 Fab in complex with CD99 peptide
Descriptor: 10A1 Fab heavy chain, 10A1 Fab light chain, CD99 antigen peptide
Authors:Romero, L.A, Hattori, T, Koide, S.
Deposit date:2021-10-04
Release date:2021-12-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:High-valency Anti-CD99 Antibodies Toward the Treatment of T Cell Acute Lymphoblastic Leukemia.
J.Mol.Biol., 434, 2021
1EHL
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BU of 1ehl by Molmil
64M-2 ANTIBODY FAB COMPLEXED WITH D(5HT)(6-4)T
Descriptor: 5'-(D(5HT)P*(6-4)T)-3', ANTI-(6-4) PHOTOPRODUCT ANTIBODY 64M-2 FAB (HEAVY CHAIN), ANTI-(6-4) PHOTOPRODUCT ANTIBODY 64M-2 FAB (LIGHT CHAIN)
Authors:Yokoyama, H, Mizutani, R, Satow, Y, Komatsu, Y, Ohtsuka, E, Nikaido, O.
Deposit date:2000-02-21
Release date:2001-02-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the 64M-2 antibody Fab fragment in complex with a DNA dT(6-4)T photoproduct formed by ultraviolet radiation.
J.Mol.Biol., 299, 2000
1KEG
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BU of 1keg by Molmil
Antibody 64M-2 Fab complexed with dTT(6-4)TT
Descriptor: 5'-D(*TP*(64T)P*TP*T)-3', Anti-(6-4) photoproduct antibody 64M-2 Fab (heavy chain), Anti-(6-4) photoproduct antibody 64M-2 Fab (light chain), ...
Authors:Yokoyama, H, Mizutani, R, Satow, Y, Sato, K, Komatsu, Y, Ohtsuka, E, Nikaido, O.
Deposit date:2001-11-15
Release date:2002-11-15
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of the DNA (6-4) photoproduct dTT(6-4)TT in complex with the 64M-2 antibody Fab fragment implies increased antibody-binding affinity by the flanking nucleotides.
Acta Crystallogr.,Sect.D, 68, 2012
6KR0
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BU of 6kr0 by Molmil
Crystal structure of HL homo-diabody
Descriptor: HL diabody
Authors:Tanaka, Y.
Deposit date:2019-08-20
Release date:2020-08-26
Last modified:2021-09-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Association behavior and control of the quality of cancer therapeutic bispecific diabodies expressed in Escherichia coli
Biochem Eng J, 160, 2020

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PDB entries from 2024-03-27

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