Author results

2ZPB
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NITROSYLATED FE-TYPE NITRILE HYDRATASE
Descriptor:Nitrile hydratase subunit alpha, Nitrile hydratase subunit beta, FE (III) ION, ...
Authors:Hashimoto, K., Suzuki, H., Taniguchi, K., Noguchi, T., Yohda, M., Odaka, M.
Deposit date:2008-07-09
Release date:2008-10-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Catalytic mechanism of nitrile hydratase proposed by time-resolved X-ray crystallography using a novel substrate, tert-butylisonitrile
J.Biol.Chem., 283, 2008
2ZPE
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NITROSYLATED FE-TYPE NITRILE HYDRATASE WITH TERT-BUTYLISONITRILE
Descriptor:Nitrile hydratase subunit alpha, Nitrile hydratase subunit beta, FE (III) ION, ...
Authors:Hashimoto, K., Suzuki, H., Taniguchi, K., Noguchi, T., Yohda, M., Odaka, M.
Deposit date:2008-07-10
Release date:2008-10-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Catalytic mechanism of nitrile hydratase proposed by time-resolved X-ray crystallography using a novel substrate, tert-butylisonitrile
J.Biol.Chem., 283, 2008
2ZPF
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COMPLEX OF FE-TYPE NITRILE HYDRATASE WITH TERT-BUTYLISONITRILE, PHOTO-ACTIVATED FOR 18MIN AT 293K
Descriptor:Nitrile hydratase subunit alpha, Nitrile hydratase subunit beta, FE (III) ION, ...
Authors:Hashimoto, K., Suzuki, H., Taniguchi, K., Noguchi, T., Yohda, M., Odaka, M.
Deposit date:2008-07-11
Release date:2008-10-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.482 Å)
Cite:Catalytic mechanism of nitrile hydratase proposed by time-resolved X-ray crystallography using a novel substrate, tert-butylisonitrile
J.Biol.Chem., 283, 2008
2ZPG
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COMPLEX OF FE-TYPE NITRILE HYDRATASE WITH TERT-BUTYLISONITRILE, PHOTO-ACTIVATED FOR 120MIN AT 293K
Descriptor:Nitrile hydratase subunit alpha, Nitrile hydratase subunit beta, FE (III) ION, ...
Authors:Hashimoto, K., Suzuki, H., Taniguchi, K., Noguchi, T., Yohda, M., Odaka, M.
Deposit date:2008-07-11
Release date:2008-10-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:Catalytic mechanism of nitrile hydratase proposed by time-resolved X-ray crystallography using a novel substrate, tert-butylisonitrile
J.Biol.Chem., 283, 2008
2ZPH
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COMPLEX OF FE-TYPE NITRILE HYDRATASE WITH TERT-BUTYLISONITRILE, PHOTO-ACTIVATED FOR 340MIN AT 293K
Descriptor:Nitrile hydratase subunit alpha, Nitrile hydratase subunit beta, FE (III) ION, ...
Authors:Hashimoto, K., Suzuki, H., Taniguchi, K., Noguchi, T., Yohda, M., Odaka, M.
Deposit date:2008-07-11
Release date:2008-10-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Catalytic mechanism of nitrile hydratase proposed by time-resolved X-ray crystallography using a novel substrate, tert-butylisonitrile
J.Biol.Chem., 283, 2008
2ZPI
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COMPLEX OF FE-TYPE NITRILE HYDRATASE WITH TERT-BUTYLISONITRILE, PHOTO-ACTIVATED FOR 440MIN AT 293K
Descriptor:Nitrile hydratase subunit alpha, Nitrile hydratase subunit beta, FE (III) ION, ...
Authors:Hashimoto, K., Suzuki, H., Taniguchi, K., Noguchi, T., Yohda, M., Odaka, M.
Deposit date:2008-07-11
Release date:2008-10-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.491 Å)
Cite:Catalytic mechanism of nitrile hydratase proposed by time-resolved X-ray crystallography using a novel substrate, tert-butylisonitrile
J.Biol.Chem., 283, 2008
3WVD
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CRYSTAL STRUCTURE OF NITRILE HYDRATASE MUTANT BR56K COMPLEXED WITH TRIMETHYLACETONITRILE, PHOTO-ACTIVATED FOR 50 MIN
Descriptor:Nitrile hydratase subunit alpha, Nitrile hydratase subunit beta, FE (III) ION, ...
Authors:Yamanaka, Y., Hashimoto, K., Noguchi, K., Yohda, M., Odaka, M.
Deposit date:2014-05-17
Release date:2015-06-17
Last modified:2015-11-04
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:Time-Resolved Crystallography of the Reaction Intermediate of Nitrile Hydratase: Revealing a Role for the Cysteinesulfenic Acid Ligand as a Catalytic Nucleophile.
Angew.Chem.Int.Ed.Engl., 54, 2015
3WVE
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CRYSTAL STRUCTURE OF NITRILE HYDRATASE MUTANT BR56K COMPLEXED WITH TRIMETHYLACETONITRILE, BEFORE PHOTO-ACTIVATION
Descriptor:Nitrile hydratase subunit alpha, Nitrile hydratase subunit beta, FE (III) ION, ...
Authors:Yamanaka, Y., Hashimoto, K., Noguchi, K., Yohda, M., Odaka, M.
Deposit date:2014-05-17
Release date:2015-06-17
Last modified:2015-11-04
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Time-Resolved Crystallography of the Reaction Intermediate of Nitrile Hydratase: Revealing a Role for the Cysteinesulfenic Acid Ligand as a Catalytic Nucleophile.
Angew.Chem.Int.Ed.Engl., 54, 2015
3X20
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CRYSTAL STRUCTURE OF NITRILE HYDRATASE MUTANT BR56K COMPLEXED WITH TRIMETHYLACETONITRILE, PHOTO-ACTIVATED FOR 25 MIN
Descriptor:Nitrile hydratase subunit alpha, Nitrile hydratase subunit beta, FE (III) ION, ...
Authors:Yamanaka, Y., Hashimoto, K., Noguchi, N., Yohda, M., Odaka, M.
Deposit date:2014-12-03
Release date:2016-01-27
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:Time-Resolved Crystallography of the Reaction Intermediate of Nitrile Hydratase: Revealing a Role for the Cysteinesulfenic Acid Ligand as a Catalytic Nucleophile.
Angew.Chem.Int.Ed.Engl., 54, 2015
3X24
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CRYSTAL STRUCTURE OF NITRILE HYDRATASE MUTANT BR56K COMPLEXED WITH TRIMETHYLACETONITRILE, PHOTO-ACTIVATED FOR 120 MIN
Descriptor:Nitrile hydratase subunit alpha, Nitrile hydratase subunit beta, FE (III) ION, ...
Authors:Yamanaka, Y., Hashimoto, K., Noguchi, K., Yohda, M., Odaka, M.
Deposit date:2014-12-10
Release date:2016-01-27
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:Time-Resolved Crystallography of the Reaction Intermediate of Nitrile Hydratase: Revealing a Role for the Cysteinesulfenic Acid Ligand as a Catalytic Nucleophile.
Angew.Chem.Int.Ed.Engl., 54, 2015
3X25
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CRYSTAL STRUCTURE OF NITRILE HYDRATASE MUTANT BR56K COMPLEXED WITH TRIMETHYLACETONITRILE, PHOTO-ACTIVATED FOR 700 MIN
Descriptor:Nitrile hydratase subunit alpha, Nitrile hydratase subunit beta, FE (III) ION, ...
Authors:Yamanaka, Y., Hashimoto, K., Noguchi, K., Yohda, M., Odaka, M.
Deposit date:2014-12-10
Release date:2016-01-27
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Time-Resolved Crystallography of the Reaction Intermediate of Nitrile Hydratase: Revealing a Role for the Cysteinesulfenic Acid Ligand as a Catalytic Nucleophile.
Angew.Chem.Int.Ed.Engl., 54, 2015
3X26
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CRYSTAL STRUCTURE OF NITRILE HYDRATASE MUTANT BR56K COMPLEXED WITH TRIMETHYLACETONITRILE, PHOTO-ACTIVATED FOR 5 MIN
Descriptor:Nitrile hydratase subunit alpha, Nitrile hydratase subunit beta, FE (III) ION, ...
Authors:Yamanaka, Y., Hashimoto, K., Noguchi, K., Yohda, M., Odaka, M.
Deposit date:2014-12-10
Release date:2016-01-27
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Time-Resolved Crystallography of the Reaction Intermediate of Nitrile Hydratase: Revealing a Role for the Cysteinesulfenic Acid Ligand as a Catalytic Nucleophile.
Angew.Chem.Int.Ed.Engl., 54, 2015
1IPA
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CRYSTAL STRUCTURE OF RNA 2'-O RIBOSE METHYLTRANSFERASE
Descriptor:RNA 2'-O-RIBOSE METHYLTRANSFERASE
Authors:Nureki, O., Shirouzu, M., Hashimoto, K., Ishitani, R., Terada, T., Tamakoshi, M., Oshima, T., Chijimatsu, M., Takio, K., Vassylyev, D.G., Shibata, T., Inoue, Y., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2001-05-02
Release date:2002-07-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:An enzyme with a deep trefoil knot for the active-site architecture.
Acta Crystallogr.,Sect.D, 58, 2002
1RRB
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THE RAS-BINDING DOMAIN OF RAF-1 FROM RAT, NMR, 1 STRUCTURE
Descriptor:RAF PROTO-ONCOGENE SERINE/THREONINE-PROTEIN KINASE
Authors:Terada, T., Ito, Y., Shirouzu, M., Tateno, M., Hashimoto, K., Kigawa, T., Ebisuzaki, T., Takio, K., Shibata, T., Yokoyama, S., Smith, B.O., Laue, E.D., Cooper, J.A., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:1998-03-26
Release date:1999-03-30
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Nuclear magnetic resonance and molecular dynamics studies on the interactions of the Ras-binding domain of Raf-1 with wild-type and mutant Ras proteins.
J.Mol.Biol., 286, 1999
2CVP
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CRYSTAL STRUCTURE OF MOUSE AMF
Descriptor:Glucose-6-phosphate isomerase, ACETATE ION, GLYCEROL
Authors:Tanaka, N., Haga, A., Naba, N., Shiraiwa, K., Kusakabe, Y., Hashimoto, K., Funasaka, T., Nagase, H., Raz, A., Nakamura, K.T.
Deposit date:2005-06-10
Release date:2006-05-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of mouse autocrine motility factor in complex with carbohydrate phosphate inhibitors provide insight into structure-activity relationship of the inhibitors
J.Mol.Biol., 356, 2006
2CXN
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CRYSTAL STRUCTURE OF MOUSE AMF / PHOSPHATE COMPLEX
Descriptor:Glucose-6-phosphate isomerase, PHOSPHATE ION, GLYCEROL
Authors:Tanaka, N., Haga, A., Naba, N., Shiraiwa, K., Kusakabe, Y., Hashimoto, K., Funasaka, T., Nagase, H., Raz, A., Nakamura, K.T.
Deposit date:2005-06-30
Release date:2006-05-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structures of mouse autocrine motility factor in complex with carbohydrate phosphate inhibitors provide insight into structure-activity relationship of the inhibitors
J.Mol.Biol., 356, 2006
2CXO
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CRYSTAL STRUCTURE OF MOUSE AMF / E4P COMPLEX
Descriptor:Glucose-6-phosphate isomerase, D-4-PHOSPHOERYTHRONIC ACID, GLYCEROL
Authors:Tanaka, N., Haga, A., Naba, N., Shiraiwa, K., Kusakabe, Y., Hashimoto, K., Funasaka, T., Nagase, H., Raz, A., Nakamura, K.T.
Deposit date:2005-06-30
Release date:2006-05-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of mouse autocrine motility factor in complex with carbohydrate phosphate inhibitors provide insight into structure-activity relationship of the inhibitors
J.Mol.Biol., 356, 2006
2CXP
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CRYSTAL STRUCTURE OF MOUSE AMF / A5P COMPLEX
Descriptor:Glucose-6-phosphate isomerase, ARABINOSE-5-PHOSPHATE, GLYCEROL
Authors:Tanaka, N., Haga, A., Naba, N., Shiraiwa, K., Kusakabe, Y., Hashimoto, K., Funasaka, T., Nagase, H., Raz, A., Nakamura, K.T.
Deposit date:2005-06-30
Release date:2006-05-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structures of mouse autocrine motility factor in complex with carbohydrate phosphate inhibitors provide insight into structure-activity relationship of the inhibitors
J.Mol.Biol., 356, 2006
2CXQ
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CRYSTAL STRUCTURE OF MOUSE AMF / S6P COMPLEX
Descriptor:Glucose-6-phosphate isomerase, D-SORBITOL-6-PHOSPHATE, GLYCEROL
Authors:Tanaka, N., Haga, A., Naba, N., Shiraiwa, K., Kusakabe, Y., Hashimoto, K., Funasaka, T., Nagase, H., Raz, A., Nakamura, K.T.
Deposit date:2005-06-30
Release date:2006-05-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structures of mouse autocrine motility factor in complex with carbohydrate phosphate inhibitors provide insight into structure-activity relationship of the inhibitors
J.Mol.Biol., 356, 2006
2CXR
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CRYSTAL STRUCTURE OF MOUSE AMF / 6PG COMPLEX
Descriptor:Glucose-6-phosphate isomerase, 6-PHOSPHOGLUCONIC ACID, GLYCEROL
Authors:Tanaka, N., Haga, A., Naba, N., Shiraiwa, K., Kusakabe, Y., Hashimoto, K., Funasaka, T., Nagase, H., Raz, A., Nakamura, K.T.
Deposit date:2005-06-30
Release date:2006-05-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structures of mouse autocrine motility factor in complex with carbohydrate phosphate inhibitors provide insight into structure-activity relationship of the inhibitors
J.Mol.Biol., 356, 2006
2CXS
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CRYSTAL STRUCTURE OF MOUSE AMF / F6P COMPLEX
Descriptor:Glucose-6-phosphate isomerase, FRUCTOSE-6-PHOSPHATE, GLYCEROL
Authors:Tanaka, N., Haga, A., Naba, N., Shiraiwa, K., Kusakabe, Y., Hashimoto, K., Funasaka, T., Nagase, H., Raz, A., Nakamura, K.T.
Deposit date:2005-06-30
Release date:2006-05-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structures of mouse autocrine motility factor in complex with carbohydrate phosphate inhibitors provide insight into structure-activity relationship of the inhibitors
J.Mol.Biol., 356, 2006
2CXT
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CRYSTAL STRUCTURE OF MOUSE AMF / F6P COMPLEX
Descriptor:Glucose-6-phosphate isomerase, FRUCTOSE-6-PHOSPHATE, GLYCEROL
Authors:Tanaka, N., Haga, A., Naba, N., Shiraiwa, K., Kusakabe, Y., Hashimoto, K., Funasaka, T., Nagase, H., Raz, A., Nakamura, K.T.
Deposit date:2005-06-30
Release date:2006-05-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structures of mouse autocrine motility factor in complex with carbohydrate phosphate inhibitors provide insight into structure-activity relationship of the inhibitors
J.Mol.Biol., 356, 2006
2CXU
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CRYSTAL STRUCTURE OF MOUSE AMF / M6P COMPLEX
Descriptor:Glucose-6-phosphate isomerase, PHOSPHATE ION, GLYCEROL
Authors:Tanaka, N., Haga, A., Naba, N., Shiraiwa, K., Kusakabe, Y., Hashimoto, K., Funasaka, T., Nagase, H., Raz, A., Nakamura, K.T.
Deposit date:2005-06-30
Release date:2006-05-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structures of mouse autocrine motility factor in complex with carbohydrate phosphate inhibitors provide insight into structure-activity relationship of the inhibitors
J.Mol.Biol., 356, 2006
2CYZ
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PHOTO-ACTIVATION STATE OF FE-TYPE NHASE IN ANAEROBIC CONDITION
Descriptor:Nitrile hydratase subunit alpha, Nitrile hydratase subunit beta, FE (III) ION, ...
Authors:Kawano, Y., Hashimoto, K., Odaka, M., Nakayama, H., Takio, K., Endo, I., Kamiya, N., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-07-09
Release date:2006-01-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:photo-activation state of Fe-type NHase in anaerobic condition
To be Published
2CZ0
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PHOTO-ACTIVATION STATE OF FE-TYPE NHASE IN AEROBIC CONDITION
Descriptor:Nitrile hydratase subunit alpha, Nitrile hydratase subunit beta, FE (III) ION, ...
Authors:Kawano, Y., Hashimoto, K., Odaka, M., Nakayama, H., Takio, K., Endo, I., Kamiya, N., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-07-09
Release date:2006-01-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:photo-activation state of Fe-type NHase in aerobic condition
To be Published
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