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7VOS
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BU of 7vos by Molmil
High-resolution neutron and X-ray joint refined structure of high-potential iron-sulfur protein in the oxidized state
Descriptor: AMMONIUM ION, GLYCEROL, High-potential iron-sulfur protein, ...
Authors:Hanazono, Y, Hirano, Y, Takeda, K, Kusaka, K, Tamada, T, Miki, K.
Deposit date:2021-10-14
Release date:2022-06-01
Last modified:2024-04-03
Method:NEUTRON DIFFRACTION (0.66 Å), X-RAY DIFFRACTION
Cite:Revisiting the concept of peptide bond planarity in an iron-sulfur protein by neutron structure analysis.
Sci Adv, 8, 2022
3W1Z
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BU of 3w1z by Molmil
Heat shock protein 16.0 from Schizosaccharomyces pombe
Descriptor: Heat shock protein 16
Authors:Hanazono, Y, Takeda, K, Akiyama, N, Aikawa, Y, Miki, K.
Deposit date:2012-11-26
Release date:2013-03-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.401 Å)
Cite:Nonequivalence Observed for the 16-Meric Structure of a Small Heat Shock Protein, SpHsp16.0, from Schizosaccharomyces pombe
Structure, 21, 2013
5ZCA
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BU of 5zca by Molmil
Crystal structure of lambda repressor (1-20) fused with maltose-binding protein
Descriptor: CITRIC ACID, Repressor protein cI,Maltose-binding periplasmic protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Hanazono, Y, Takeda, K, Miki, K.
Deposit date:2018-02-16
Release date:2018-08-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:Co-translational folding of alpha-helical proteins: structural studies of intermediate-length variants of the lambda repressor
Febs Open Bio, 8, 2018
6AIR
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BU of 6air by Molmil
High resolution structure of perdeuterated high-potential iron-sulfur protein
Descriptor: GLYCEROL, High-potential iron-sulfur protein, IRON/SULFUR CLUSTER, ...
Authors:Hanazono, Y, Takeda, K, Miki, K.
Deposit date:2018-08-24
Release date:2019-08-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (0.85 Å)
Cite:Characterization of perdeuterated high-potential iron-sulfur protein with high-resolution X-ray crystallography.
Proteins, 88, 2020
6AIQ
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BU of 6aiq by Molmil
High resolution structure of recombinant high-potential iron-sulfur protein
Descriptor: GLYCEROL, High-potential iron-sulfur protein, IRON/SULFUR CLUSTER, ...
Authors:Hanazono, Y, Takeda, K, Miki, K.
Deposit date:2018-08-24
Release date:2019-08-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (0.85 Å)
Cite:Characterization of perdeuterated high-potential iron-sulfur protein with high-resolution X-ray crystallography.
Proteins, 88, 2020
3VQL
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BU of 3vql by Molmil
Small heat shock protein hsp14.0 of C-terminal deletion variant
Descriptor: Small heat shock protein StHsp14.0
Authors:Hanazono, Y, Takeda, K, Miki, K.
Deposit date:2012-03-26
Release date:2012-06-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural studies on the oligomeric transition of a small heat shock protein, StHsp14.0
J.Mol.Biol., 422, 2012
3VQK
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BU of 3vqk by Molmil
Small heat shock protein hsp14.0 of wild type
Descriptor: Small heat shock protein StHsp14.0
Authors:Hanazono, Y, Takeda, K, Miki, K.
Deposit date:2012-03-26
Release date:2012-06-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (4.5 Å)
Cite:Structural studies on the oligomeric transition of a small heat shock protein, StHsp14.0
J.Mol.Biol., 422, 2012
3VQM
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BU of 3vqm by Molmil
Small heat shock protein hsp14.0 of C-terminal deletion variant with C-terminal peptide
Descriptor: C-terminal peptide from Small heat shock protein StHsp14.0, Small heat shock protein StHsp14.0
Authors:Hanazono, Y, Takeda, K, Miki, K.
Deposit date:2012-03-26
Release date:2012-06-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structural studies on the oligomeric transition of a small heat shock protein, StHsp14.0
J.Mol.Biol., 422, 2012
3WOA
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BU of 3woa by Molmil
Crystal structure of lambda repressor (1-45) fused with maltose-binding protein
Descriptor: Repressor protein CI, Maltose-binding periplasmic protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Hanazono, Y, Takeda, K, Miki, K.
Deposit date:2013-12-25
Release date:2015-04-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Co-translational folding of alpha-helical proteins: structural studies of intermediate-length variants of the lambda repressor.
FEBS Open Bio, 8, 2018
5B3Q
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BU of 5b3q by Molmil
Nqo5 of the trypsin-resistant fragment (1-134) in P63 form
Descriptor: NADH-quinone oxidoreductase subunit 5
Authors:Hanazono, Y, Takeda, K, Miki, K.
Deposit date:2016-03-09
Release date:2016-07-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.003 Å)
Cite:Characterization of the Nqo5 subunit of bacterial complex I in the isolated state
Febs Open Bio, 6, 2016
5B3Y
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BU of 5b3y by Molmil
Crystal structure of hPin1 WW domain (5-23) fused with maltose-binding protein
Descriptor: Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1,Maltose-binding periplasmic protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Hanazono, Y, Takeda, K, Miki, K.
Deposit date:2016-03-17
Release date:2016-10-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.901 Å)
Cite:Structural studies of the N-terminal fragments of the WW domain: Insights into co-translational folding of a beta-sheet protein
Sci Rep, 6, 2016
5B3W
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BU of 5b3w by Molmil
Crystal structure of hPin1 WW domain (5-15) fused with maltose-binding protein in C2221 form
Descriptor: CITRIC ACID, Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1,Maltose-binding periplasmic protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Hanazono, Y, Takeda, K, Miki, K.
Deposit date:2016-03-17
Release date:2016-10-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural studies of the N-terminal fragments of the WW domain: Insights into co-translational folding of a beta-sheet protein
Sci Rep, 6, 2016
5B3X
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BU of 5b3x by Molmil
Crystal structure of hPin1 WW domain (5-15) fused with maltose-binding protein in P41212 form
Descriptor: Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1,Maltose-binding periplasmic protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Hanazono, Y, Takeda, K, Miki, K.
Deposit date:2016-03-17
Release date:2016-10-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural studies of the N-terminal fragments of the WW domain: Insights into co-translational folding of a beta-sheet protein
Sci Rep, 6, 2016
5B3Z
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BU of 5b3z by Molmil
Crystal structure of hPin1 WW domain (5-39) fused with maltose-binding protein
Descriptor: Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1,Maltose-binding periplasmic protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Hanazono, Y, Takeda, K, Miki, K.
Deposit date:2016-03-17
Release date:2016-10-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural studies of the N-terminal fragments of the WW domain: Insights into co-translational folding of a beta-sheet protein
Sci Rep, 6, 2016
5B3P
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BU of 5b3p by Molmil
Nqo5 of the trypsin-resistant fragment (1-134) in P212121 form
Descriptor: CALCIUM ION, NADH-quinone oxidoreductase subunit 5
Authors:Hanazono, Y, Takeda, K, Miki, K.
Deposit date:2016-03-09
Release date:2016-07-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.652 Å)
Cite:Characterization of the Nqo5 subunit of bacterial complex I in the isolated state
Febs Open Bio, 6, 2016
5BMY
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BU of 5bmy by Molmil
Crystal structure of hPin1 WW domain (5-21) fused with maltose-binding protein
Descriptor: Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1,Maltose-binding periplasmic protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Hanazono, Y, Takeda, K, Miki, K.
Deposit date:2015-05-25
Release date:2016-10-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Structural studies of the N-terminal fragments of the WW domain: Insights into co-translational folding of a beta-sheet protein
Sci Rep, 6, 2016
5ZUI
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BU of 5zui by Molmil
Crystal Structure of HSP104 from Chaetomium thermophilum
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Heat Shock Protein 104, SULFATE ION
Authors:Hanazono, Y, Inoue, Y, Noguchi, K, Yohda, M, Shinohara, K, Takeda, K, Miki, K.
Deposit date:2018-05-07
Release date:2019-06-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.701 Å)
Cite:Split conformation of Chaetomium thermophilum Hsp104 disaggregase.
Structure, 2021
7CG3
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BU of 7cg3 by Molmil
Staggered ring conformation of CtHsp104 (Hsp104 from Chaetomium Thermophilum)
Descriptor: Heat shock protein 104
Authors:Inoue, Y, Hanazono, Y, Noi, K, Kawamoto, A, Kimatsuka, M, Harada, R, Takeda, K, Iwamasa, N, Shibata, K, Noguchi, K, Shigeta, Y, Namba, K, Ogura, T, Miki, K, Shinohara, K, Yohda, M.
Deposit date:2020-06-30
Release date:2021-04-28
Last modified:2021-07-14
Method:ELECTRON MICROSCOPY (5.1 Å)
Cite:Split conformation of Chaetomium thermophilum Hsp104 disaggregase.
Structure, 29, 2021
3AAC
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BU of 3aac by Molmil
Small heat shock protein hsp14.0 with the mutations of I120F and I122F in the form II crystal
Descriptor: Putative uncharacterized protein ST1653
Authors:Takeda, K, Hayashi, T, Abe, T, Hirano, Y, Hanazono, Y, Yohda, M, Miki, K.
Deposit date:2009-11-13
Release date:2010-11-17
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Dimer structure and conformational variability in the N-terminal region of an archaeal small heat shock protein, StHsp14.0
J.Struct.Biol., 174, 2011
3AAB
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BU of 3aab by Molmil
Small heat shock protein hsp14.0 with the mutations of I120F and I122F in the form I crystal
Descriptor: GLYCEROL, ISOPROPYL ALCOHOL, Putative uncharacterized protein ST1653
Authors:Takeda, K, Hayashi, T, Abe, T, Hirano, Y, Hanazono, Y, Yohda, M, Miki, K.
Deposit date:2009-11-13
Release date:2010-11-17
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.851 Å)
Cite:Dimer structure and conformational variability in the N-terminal region of an archaeal small heat shock protein, StHsp14.0
J.Struct.Biol., 174, 2011
5WQR
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BU of 5wqr by Molmil
High resolution structure of high-potential iron-sulfur protein in the reduced state
Descriptor: GLYCEROL, High-potential iron-sulfur protein, IRON/SULFUR CLUSTER, ...
Authors:Ohno, H, Takeda, K, Niwa, S, Tsujinaka, T, Hanazono, Y, Hirano, Y, Miki, K.
Deposit date:2016-11-28
Release date:2017-06-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (0.8 Å)
Cite:Crystallographic characterization of the high-potential iron-sulfur protein in the oxidized state at 0.8 angstrom resolution
PLoS ONE, 12, 2017
5WQQ
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BU of 5wqq by Molmil
High resolution structure of high-potential iron-sulfur protein in the oxidized state
Descriptor: GLYCEROL, High-potential iron-sulfur protein, IRON/SULFUR CLUSTER, ...
Authors:Ohno, H, Takeda, K, Niwa, S, Tsujinaka, T, Hanazono, Y, Hirano, Y, Miki, K.
Deposit date:2016-11-28
Release date:2017-06-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (0.8 Å)
Cite:Crystallographic characterization of the high-potential iron-sulfur protein in the oxidized state at 0.8 angstrom resolution
PLoS ONE, 12, 2017
6JGJ
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BU of 6jgj by Molmil
Crystal structure of the F99S/M153T/V163A/E222Q variant of GFP at 0.78 A
Descriptor: Green fluorescent protein, MAGNESIUM ION
Authors:Takaba, K, Tai, Y, Hanazono, Y, Miki, K, Takeda, K.
Deposit date:2019-02-14
Release date:2019-04-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (0.78 Å)
Cite:Subatomic resolution X-ray structures of green fluorescent protein.
Iucrj, 6, 2019
6JGH
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BU of 6jgh by Molmil
Crystal structure of the F99S/M153T/V163A/T203I variant of GFP at 0.94 A
Descriptor: CHLORIDE ION, Green fluorescent protein
Authors:Eki, H, Tai, Y, Takaba, K, Hanazono, Y, Miki, K, Takeda, K.
Deposit date:2019-02-14
Release date:2019-04-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (0.94 Å)
Cite:Subatomic resolution X-ray structures of green fluorescent protein.
Iucrj, 6, 2019
6JGI
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BU of 6jgi by Molmil
Crystal structure of the S65T/F99S/M153T/V163A variant of GFP at 0.85 A
Descriptor: Green fluorescent protein
Authors:Tai, Y, Takaba, K, Hanazono, Y, Miki, K, Takeda, K.
Deposit date:2019-02-14
Release date:2019-04-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (0.85 Å)
Cite:Subatomic resolution X-ray structures of green fluorescent protein.
Iucrj, 6, 2019

 

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