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6IKN
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BU of 6ikn by Molmil
Crystal structure of the GAS7 F-BAR domain
Descriptor: Growth arrest-specific protein 7
Authors:Hanawa-Suetsugu, K, Itoh, Y, Kohda, D, Shimada, A, Suetsugu, S.
Deposit date:2018-10-16
Release date:2019-10-16
Last modified:2019-10-30
Method:X-RAY DIFFRACTION (3 Å)
Cite:Phagocytosis is mediated by two-dimensional assemblies of the F-BAR protein GAS7.
Nat Commun, 10, 2019
6IKO
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BU of 6iko by Molmil
Crystal structure of mouse GAS7cb
Descriptor: Growth arrest-specific protein 7
Authors:Hanawa-Suetsugu, K, Itoh, Y, Kohda, D, Shimada, A, Suetsugu, S.
Deposit date:2018-10-16
Release date:2019-10-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.756 Å)
Cite:Phagocytosis is mediated by two-dimensional assemblies of the F-BAR protein GAS7.
Nat Commun, 10, 2019
1UEB
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BU of 1ueb by Molmil
Crystal structure of translation elongation factor P from Thermus thermophilus HB8
Descriptor: elongation factor P
Authors:Hanawa-Suetsugu, K, Sekine, S, Sakai, H, Hori-Takemoto, C, Terada, T, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-05-09
Release date:2004-05-25
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of elongation factor P from Thermus thermophilus HB8
Proc.Natl.Acad.Sci.USA, 101, 2004
3A98
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BU of 3a98 by Molmil
Crystal structure of the complex of the interacting regions of DOCK2 and ELMO1
Descriptor: Dedicator of cytokinesis protein 2, Engulfment and cell motility protein 1
Authors:Hanawa-Suetsugu, K, Kukimoto-Niino, M, Sekine, S, Ito, T, Mishima-Tsumagari, C, Terada, T, Shirouzu, M, Fukui, Y, Yokoyama, S.
Deposit date:2009-10-21
Release date:2010-10-27
Last modified:2019-09-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for mutual relief of the Rac guanine nucleotide exchange factor DOCK2 and its partner ELMO1 from their autoinhibited forms.
Proc.Natl.Acad.Sci.USA, 109, 2012
3B13
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BU of 3b13 by Molmil
Crystal structure of the DHR-2 domain of DOCK2 in complex with Rac1 (T17N mutant)
Descriptor: Dedicator of cytokinesis protein 2, Ras-related C3 botulinum toxin substrate 1
Authors:Hanawa-Suetsugu, K, Kukimoto-Niino, M, Mishima-Tsumagari, C, Terada, T, Shirouzu, M, Fukui, Y, Yokoyama, S.
Deposit date:2011-06-24
Release date:2012-03-14
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.006 Å)
Cite:Structural basis for mutual relief of the Rac guanine nucleotide exchange factor DOCK2 and its partner ELMO1 from their autoinhibited forms.
Proc.Natl.Acad.Sci.USA, 109, 2012
3VHL
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BU of 3vhl by Molmil
Crystal structure of the DHR-2 domain of DOCK8 in complex with Cdc42 (T17N mutant)
Descriptor: Cell division control protein 42 homolog, Dedicator of cytokinesis protein 8, PHOSPHATE ION
Authors:Hanawa-Suetsugu, K, Kukimoto-Niino, M, Nishizak, T, Terada, T, Shirouzu, M, Fukui, Y, Yokoyama, S.
Deposit date:2011-08-26
Release date:2012-06-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.085 Å)
Cite:DOCK8 is a Cdc42 activator critical for interstitial dendritic cell migration during immune responses.
Blood, 119, 2012
3ABH
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BU of 3abh by Molmil
Crystal structure of the EFC/F-BAR domain of human PACSIN2/Syndapin II (2.0 A)
Descriptor: Protein kinase C and casein kinase substrate in neurons protein 2
Authors:Shimada, A, Shirouzu, M, Hanawa-Suetsugu, K, Terada, T, Umehara, T, Suetsugu, S, Yamamoto, M, Yokoyama, S.
Deposit date:2009-12-11
Release date:2010-04-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Mapping of the basic amino-acid residues responsible for tubulation and cellular protrusion by the EFC/F-BAR domain of pacsin2/Syndapin II
Febs Lett., 584, 2010
3ACO
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BU of 3aco by Molmil
Crystal structure of the EFC/F-BAR domain of human PACSIN2/Syndapin II (2.7 A)
Descriptor: CALCIUM ION, Protein kinase C and casein kinase substrate in neurons protein 2
Authors:Shimada, A, Shirouzu, M, Hanawa-Suetsugu, K, Terada, T, Umehara, T, Suetsugu, S, Yamamoto, M, Yokoyama, S.
Deposit date:2010-01-07
Release date:2010-04-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Mapping of the basic amino-acid residues responsible for tubulation and cellular protrusion by the EFC/F-BAR domain of pacsin2/Syndapin II
Febs Lett., 584, 2010
2CZK
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BU of 2czk by Molmil
Crystal structure of human myo-inositol monophosphatase 2 (IMPA2) (trigonal form)
Descriptor: Inositol monophosphatase 2
Authors:Arai, R, Ito, K, Hanawa-Suetsugu, K, Ohnishi, T, Ohba, H, Yoshikawa, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-07-13
Release date:2006-07-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of human myo-inositol monophosphatase 2, the product of the putative susceptibility gene for bipolar disorder, schizophrenia, and febrile seizures
Proteins, 67, 2007
2YWH
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BU of 2ywh by Molmil
Crystal structure of GDP-bound LepA from Aquifex aeolicus
Descriptor: GTP-binding protein LepA, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
Authors:Kawazoe, M, Takemoto, C, Kaminishi, T, Nishino, A, Nakayama-Ushikoshi, R, Hanawa-Suetsugu, K, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-20
Release date:2008-04-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Crystal structures of GTP-binding protein LepA from Aquifex aeolicus.
To be Published
2YV5
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BU of 2yv5 by Molmil
Crystal structure of Yjeq from Aquifex aeolicus
Descriptor: CHLORIDE ION, GUANOSINE-5'-DIPHOSPHATE, YjeQ protein, ...
Authors:Wang, H, Kaminishi, T, Hanawa-Suetsugu, K, Takemoto, C, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-09
Release date:2008-04-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of YjeQ from Aquifex aeolicus
To be Published
2YWF
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BU of 2ywf by Molmil
Crystal structure of GMPPNP-bound LepA from Aquifex aeolicus
Descriptor: GTP-binding protein lepA, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
Authors:Kawazoe, M, Takemoto, C, Kaminishi, T, Nishino, A, Nakayama-Ushikoshi, R, Hanawa-Suetsugu, K, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-20
Release date:2008-04-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Crystal structures of GTP-binding protein LepA from Aquifex aeolicus
To be Published
2YWE
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BU of 2ywe by Molmil
Crystal structure of LepA from Aquifex aeolicus
Descriptor: GTP-binding protein lepA
Authors:Kawazoe, M, Takemoto, C, Kaminishi, T, Nishino, A, Nakayama-Ushikoshi, R, Hanawa-Suetsugu, K, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-20
Release date:2008-04-29
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structures of GTP-binding protein LepA from Aquifex aeolicus
To be Published
2YWG
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BU of 2ywg by Molmil
Crystal structure of GTP-bound LepA from Aquifex aeolicus
Descriptor: GTP-binding protein LepA, GUANOSINE-5'-TRIPHOSPHATE
Authors:Kawazoe, M, Takemoto, C, Kaminishi, T, Nishino, A, Nakayama-Ushikoshi, R, Hanawa-Suetsugu, K, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-20
Release date:2008-04-29
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.94 Å)
Cite:Crystal structures of GTP-binding protein LepA from Aquifex aeolicus
To be Published
2ZET
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BU of 2zet by Molmil
Crystal structure of the small GTPase Rab27B complexed with the Slp homology domain of Slac2-a/melanophilin
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Melanophilin, ...
Authors:Kukimoto-Niino, M, Sakamoto, A, Kanno, E, Hanawa-Suetsugu, K, Terada, T, Shirouzu, M, Fukuda, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-12-17
Release date:2008-09-30
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis for the exclusive specificity of Slac2-a/melanophilin for the Rab27 GTPases.
Structure, 16, 2008
2ZM6
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BU of 2zm6 by Molmil
Crystal structure of the Thermus thermophilus 30S ribosomal subunit
Descriptor: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Kaminishi, T, Wang, H, Kawazoe, M, Ishii, R, Schluenzen, F, Hanawa-Suetsugu, K, Wilson, D.N, Nomura, M, Takemoto, C, Shirouzu, M, Fucini, P, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2008-04-11
Release date:2009-04-14
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Crystal structure of the Thermus thermophilus 30S ribosomal subunit
To be Published
2CXH
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BU of 2cxh by Molmil
Crystal structure of probable ribosomal biogenesis protein from Aeropyrum pernix K1
Descriptor: Probable brix-domain ribosomal biogenesis protein
Authors:Kawazoe, M, Takemoto, C, Hanawa-Suetsugu, K, Kaminishi, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-06-29
Release date:2005-12-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of probable ribosomal biogenesis protein from Aeropyrum pernix K1
To be Published
2E5L
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BU of 2e5l by Molmil
A snapshot of the 30S ribosomal subunit capturing mRNA via the Shine- Dalgarno interaction
Descriptor: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Kaminishi, T, Wilson, D.N, Takemoto, C, Harms, J.M, Kawazoe, M, Schluenzen, F, Hanawa-Suetsugu, K, Shirouzu, M, Fucini, P, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-12-21
Release date:2007-05-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:A snapshot of the 30S ribosomal subunit capturing mRNA via the Shine-Dalgarno interaction
Structure, 15, 2007
2RQR
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BU of 2rqr by Molmil
The solution structure of human DOCK2 SH3 domain - ELMO1 peptide chimera complex
Descriptor: Engulfment and cell motility protein 1,Dedicator of cytokinesis protein 2
Authors:Yokoyama, S, Tochio, N, Koshiba, S, Kigawa, T, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2009-10-21
Release date:2010-10-27
Last modified:2020-01-22
Method:SOLUTION NMR
Cite:Structural basis for mutual relief of the Rac guanine nucleotide exchange factor DOCK2 and its partner ELMO1 from their autoinhibited forms.
Proc.Natl.Acad.Sci.USA, 109, 2012
1WDV
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BU of 1wdv by Molmil
Crystal structure of hypothetical protein APE2540
Descriptor: hypothetical protein APE2540
Authors:Murayama, K, Kato-Murayama, M, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-18
Release date:2004-11-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of a putative trans-editing enzyme for prolyl-tRNA synthetase from Aeropyrum pernix K1 at 1.7 A resolution.
Acta Crystallogr.,Sect.F, 61, 2005
2HHH
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BU of 2hhh by Molmil
Crystal structure of kasugamycin bound to the 30S ribosomal subunit
Descriptor: (1S,2R,3S,4R,5S,6S)-2,3,4,5,6-PENTAHYDROXYCYCLOHEXYL 2-AMINO-4-{[CARBOXY(IMINO)METHYL]AMINO}-2,3,4,6-TETRADEOXY-ALPHA-D-ARABINO-HEXOPYRANOSIDE, 16S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Schluenzen, F.
Deposit date:2006-06-28
Release date:2006-09-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:The antibiotic kasugamycin mimics mRNA nucleotides to destabilize tRNA binding and inhibit canonical translation initiation.
Nat.Struct.Mol.Biol., 13, 2006
3W9F
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BU of 3w9f by Molmil
Crystal structure of the ankyrin repeat domain of chicken TRPV4 in complex with IP3
Descriptor: D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE, Vanilloid receptor-related osmotically activated channel protein
Authors:Itoh, Y, Hamada-nakahara, S, Suetsugu, S.
Deposit date:2013-04-04
Release date:2014-04-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:TRPV4 channel activity is modulated by direct interaction of the ankyrin domain to PI(4,5)P2
Nat Commun, 5, 2014
3W9G
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BU of 3w9g by Molmil
Crystal structure of the ankyrin repeat domain of chicken TRPV4
Descriptor: Vanilloid receptor-related osmotically activated channel protein
Authors:Itoh, Y, Hamada-nakahara, S, Suetsugu, S.
Deposit date:2013-04-04
Release date:2014-04-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:TRPV4 channel activity is modulated by direct interaction of the ankyrin domain to PI(4,5)P2
Nat Commun, 5, 2014
2EFL
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BU of 2efl by Molmil
Crystal structure of the EFC domain of formin-binding protein 17
Descriptor: Formin-binding protein 1
Authors:Shimada, A, Niwa, H, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-23
Release date:2007-05-29
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Curved EFC/F-BAR-Domain Dimers Are Joined End to End into a Filament for Membrane Invagination in Endocytosis
Cell(Cambridge,Mass.), 129, 2007
2EFK
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BU of 2efk by Molmil
Crystal structure of the EFC domain of Cdc42-interacting protein 4
Descriptor: Cdc42-interacting protein 4
Authors:Shimada, A, Niwa, H, Chen, L, Liu, Z.-J, Wang, B.-C, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-23
Release date:2007-05-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Curved EFC/F-BAR-Domain Dimers Are Joined End to End into a Filament for Membrane Invagination in Endocytosis
Cell(Cambridge,Mass.), 129, 2007

 

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