Author results

1FBM
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ASSEMBLY DOMAIN OF CARTILAGE OLIGOMERIC MATRIX PROTEIN IN COMPLEX WITH ALL-TRANS RETINOL
Descriptor:PROTEIN (CARTILAGE OLIGOMERIC MATRIX PROTEIN), RETINOL
Authors:Guo, Y., Bozic, D., Malashkevich, V.N., Kammerer, R.A., Schulthess, T.
Deposit date:2000-07-16
Release date:2000-08-02
Last modified:2018-02-28
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:All-trans retinol, vitamin D and other hydrophobic compounds bind in the axial pore of the five-stranded coiled-coil domain of cartilage oligomeric matrix protein.
EMBO J., 17, 1998
1Q5V
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APO-NIKR
Descriptor:Nickel responsive regulator
Authors:Schreiter, E.R., Sintchak, M.D., Guo, Y., Chivers, P.T., Sauer, R.T., Drennan, C.L.
Deposit date:2003-08-11
Release date:2003-09-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of the Nickel-Responsive Transcription Factor NikR
Nat.Struct.Biol., 10, 2003
1Q5Y
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NICKEL-BOUND C-TERMINAL REGULATORY DOMAIN OF NIKR
Descriptor:Nickel responsive regulator, NICKEL (II) ION, 1,2-ETHANEDIOL
Authors:Schreiter, E.R., Sintchak, M.D., Guo, Y., Chivers, P.T., Sauer, R.T., Drennan, C.L.
Deposit date:2003-08-11
Release date:2003-09-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal Structure of the Nickel-Responsive Transcription Factor NikR
Nat.Struct.Biol., 10, 2003
1R5I
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CRYSTAL STRUCTURE OF THE MAM-MHC COMPLEX
Descriptor:HLA class II histocompatibility antigen, DR alpha chain, DRB1-1 beta chain, ...
Authors:Zhao, Y., Li, Z., Drozd, S.J., Guo, Y., Mourad, W., Li, H.
Deposit date:2003-10-10
Release date:2004-03-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of Mycoplasma arthritidis mitogen complexed with HLA-DR1 reveals a novel superantigen fold and a dimerized superantigen-MHC complex.
Structure, 12, 2004
1SL4
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CRYSTAL STRUCTURE OF DC-SIGN CARBOHYDRATE RECOGNITION DOMAIN COMPLEXED WITH MAN4
Descriptor:mDC-SIGN1B type I isoform, ALPHA-D-MANNOSE, CALCIUM ION
Authors:Guo, Y., Feinberg, H., Conroy, E., Mitchell, D.A., Alvarez, R., Blixt, O., Taylor, M.E., Weis, W.I., Drickamer, K.
Deposit date:2004-03-05
Release date:2004-06-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural basis for distinct ligand-binding and targeting properties of the receptors DC-SIGN and DC-SIGNR
Nat.Struct.Mol.Biol., 11, 2004
1SL5
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CRYSTAL STRUCTURE OF DC-SIGN CARBOHYDRATE RECOGNITION DOMAIN COMPLEXED WITH LNFP III (DEXTRA L504).
Descriptor:mDC-SIGN1B type I isoform, BETA-D-GALACTOSE, N-ACETYL-D-GLUCOSAMINE, ...
Authors:Guo, Y., Feinberg, H., Conroy, E., Mitchell, D.A., Alvarez, R., Blixt, O., Taylor, M.E., Weis, W.I., Drickamer, K.
Deposit date:2004-03-05
Release date:2004-06-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for distinct ligand-binding and targeting properties of the receptors DC-SIGN and DC-SIGNR
Nat.Struct.Mol.Biol., 11, 2004
1SL6
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CRYSTAL STRUCTURE OF A FRAGMENT OF DC-SIGNR (CONTAING THE CARBOHYDRATE RECOGNITION DOMAIN AND TWO REPEATS OF THE NECK) COMPLEXED WITH LEWIS-X.
Descriptor:C-type lectin DC-SIGNR, BETA-D-GALACTOSE, 2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE, ...
Authors:Guo, Y., Feinberg, H., Conroy, E., Mitchell, D.A., Alvarez, R., Blixt, O., Taylor, M.E., Weis, W.I., Drickamer, K.
Deposit date:2004-03-05
Release date:2004-06-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural basis for distinct ligand-binding and targeting properties of the receptors DC-SIGN and DC-SIGNR
Nat.Struct.Mol.Biol., 11, 2004
1XAR
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CRYSTAL STRUCTURE OF A FRAGMENT OF DC-SIGNR (CONTAINING THE CARBOHYDRATE RECOGNITION DOMAIN AND TWO REPEATS OF THE NECK).
Descriptor:CD209 antigen-like protein 1, SODIUM ION
Authors:Feinberg, H., Guo, Y., Mitchell, D.A., Drickamer, K., Weis, W.I.
Deposit date:2004-08-26
Release date:2004-11-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Extended Neck Regions Stabilize Tetramers of the Receptors DC-SIGN and DC-SIGNR
J.Biol.Chem., 280, 2005
1ZKY
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HUMAN ESTROGEN RECEPTOR ALPHA LIGAND-BINDING DOMAIN IN COMPLEX WITH OBCP-3M AND A GLUCOCORTICOID RECEPTOR INTERACTING PROTEIN 1 NR BOX II PEPTIDE
Descriptor:Estrogen receptor, Nuclear receptor coactivator 2, 4-[(1S,2S,5S)-5-(HYDROXYMETHYL)-6,8,9-TRIMETHYL-3-OXABICYCLO[3.3.1]NON-7-EN-2-YL]PHENOL
Authors:Rajan, S.S., Hsieh, R.W., Sharma, S.K., Hahm, J.B., Nettles, K.W., Greene, G.L.
Deposit date:2005-05-04
Release date:2006-05-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Identification of ligands with bicyclic scaffolds provides insights into mechanisms of estrogen receptor subtype selectivity.
J.Biol.Chem., 281, 2006
1ZP5
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CRYSTAL STRUCTURE OF THE COMPLEX BETWEEN MMP-8 AND A N-HYDROXYUREA INHIBITOR
Descriptor:Neutrophil collagenase, CALCIUM ION, ZINC ION, ...
Authors:Campestre, C., Agamennone, M., Tortorella, P., Preziuso, S., Biasone, A., Gavuzzo, E., Pochetti, G., Mazza, F., Tschesche, H., Gallina, C.
Deposit date:2005-05-16
Release date:2005-12-06
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:N-Hydroxyurea as zinc binding group in matrix metalloproteinase inhibition: Mode of binding in a complex with MMP-8.
Bioorg.Med.Chem.Lett., 16, 2006
2AXH
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CRYSTAL STRUCTURES OF T CELL RECEPTOR BETA CHAINS RELATED TO RHEUMATOID ARTHRITIS
Descriptor:T cell receptor beta chain
Authors:Li, H., Van Vranken, S., Zhao, Y., Li, Z., Guo, Y., Eisele, L., Li, Y.
Deposit date:2005-09-05
Release date:2005-09-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structures of T cell receptor (beta) chains related to rheumatoid arthritis.
Protein Sci., 14, 2005
2AXJ
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CRYSTAL STRUCTURES OF T CELL RECEPTOR BETA CHAINS RELATED TO RHEUMATOID ARTHRITIS
Descriptor:SF4 T cell receptor beta chain
Authors:Li, H., Van Vranken, S., Zhao, Y., Li, Z., Guo, Y., Eisele, L., Li, Y.
Deposit date:2005-09-05
Release date:2005-09-20
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal structures of T cell receptor (beta) chains related to rheumatoid arthritis.
Protein Sci., 14, 2005
2B1V
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HUMAN ESTROGEN RECEPTOR ALPHA LIGAND-BINDING DOMAIN IN COMPLEX WITH OBCP-1M AND A GLUCOCORTICOID RECEPTOR INTERACTING PROTEIN 1 NR BOX II PEPTIDE
Descriptor:Estrogen receptor, Nuclear receptor coactivator 2, 4-[(1S,2S,5S)-5-(HYDROXYMETHYL)-8-METHYL-3-OXABICYCLO[3.3.1]NON-7-EN-2-YL]PHENOL
Authors:Rajan, S.S., Hsieh, R.W., Sharma, S.K., Greene, G.L.
Deposit date:2005-09-16
Release date:2006-05-09
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Identification of ligands with bicyclic scaffolds provides insights into mechanisms of estrogen receptor subtype selectivity.
J.Biol.Chem., 281, 2006
2FAI
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HUMAN ESTROGEN RECEPTOR ALPHA LIGAND-BINDING DOMAIN IN COMPLEX WITH OBCP-2M AND A GLUCOCORTICOID RECEPTOR INTERACTING PROTEIN 1 NR BOX II PEPTIDE
Descriptor:Estrogen receptor, Nuclear receptor coactivator 2, 4-[(1S,2S,5S,9R)-5-(HYDROXYMETHYL)-8,9-DIMETHYL-3-OXABICYCLO[3.3.1]NON-7-EN-2-YL]PHENOL
Authors:Rajan, S.S., Hsieh, R.W., Sharma, S.K., Greene, G.L.
Deposit date:2005-12-07
Release date:2006-05-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Identification of ligands with bicyclic scaffolds provides insights into mechanisms of estrogen receptor subtype selectivity.
J.Biol.Chem., 281, 2006
2ICW
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CRYSTAL STRUCTURE OF A COMPLETE TERNARY COMPLEX BETWEEN TCR, SUPERANTIGEN, AND PEPTIDE-MHC CLASS II MOLECULE
Descriptor:HLA class II histocompatibility antigen, DR alpha chain, DRB1-1 beta chain, ...
Authors:Wang, L., Zhao, Y., Li, H.
Deposit date:2006-09-13
Release date:2007-03-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Crystal structure of a complete ternary complex of TCR, superantigen and peptide-MHC.
Nat.Struct.Mol.Biol., 14, 2007
2N17
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NMR STRUCTURE OF A KAZAL-TYPE SERINE PROTEASE INHIBITOR FROM THE SUBTERRANEAN TERMITE DEFENSE GLAND OF COPTOTERMES FORMOSANUS SHIRAKI SOLDIERS
Descriptor:Lysozyme-Protease Inhibitor Protein
Authors:Negulescu, H., Guo, Y., Garner, T.P., Goodwin, O.Y., Henderson, G., Laine, R.A., Macnaughtan, M.A.
Deposit date:2015-03-23
Release date:2015-05-06
Last modified:2015-05-27
Method:SOLUTION NMR
Cite:A Kazal-Type Serine Protease Inhibitor from the Defense Gland Secretion of the Subterranean Termite Coptotermes formosanus Shiraki.
Plos One, 10, 2015
2OJE
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MYCOPLASMA ARTHRITIDIS-DERIVED MITOGEN COMPLEXED WITH CLASS II MHC MOLECULE HLA-DR1/HA COMPLEX IN THE PRESENCE OF EDTA
Descriptor:HLA class II histocompatibility antigen, DR alpha chain precursor, DRB1-1 beta chain precursor, ...
Authors:Li, H., Zhao, Y., Guo, Y., Li, Z., Eisele, L., Mourad, W.
Deposit date:2007-01-12
Release date:2007-01-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Zinc induces dimerization of the class II major histocompatibility complex molecule that leads to cooperative binding to a superantigen.
J.Biol.Chem., 282, 2007
2OSL
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CRYSTAL STRUCTURE OF RITUXIMAB FAB IN COMPLEX WITH AN EPITOPE PEPTIDE
Descriptor:light chain of the Rituximab Fab fragment, heavy chain of the Rituximab Fab fragment, B-lymphocyte antigen CD20
Authors:Du, J., Zhong, C., Ding, J.
Deposit date:2007-02-06
Release date:2007-04-10
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis for recognition of CD20 by therapeutic antibody Rituximab
J.Biol.Chem., 282, 2007
2OY0
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CRYSTAL STRUCTURE OF THE WEST NILE VIRUS METHYLTRANSFERASE
Descriptor:Methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Li, H.M., Zhao, Y.W., Guo, Y., Shi, P.Y.
Deposit date:2007-02-21
Release date:2007-04-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure and Function of Flavivirus NS5 Methyltransferase.
J.Virol., 81, 2007
2P15
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CRYSTAL STRUCTURE OF THE ER ALPHA LIGAND BINDING DOMAIN WITH THE AGONIST ORTHO-TRIFLUOROMETHYLPHENYLVINYL ESTRADIOL
Descriptor:Estrogen receptor, GRIP peptide, (17BETA)-17-{(E)-2-[2-(TRIFLUOROMETHYL)PHENYL]VINYL}ESTRA-1(10),2,4-TRIENE-3,17-DIOL
Authors:Bruning, J.B., Nettles, K.W., Greene, G.L., Kim, Y.
Deposit date:2007-03-02
Release date:2007-05-01
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Structural plasticity in the oestrogen receptor ligand-binding domain.
Embo Rep., 8, 2007
2PVE
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NMR AND X-RAY ANALYSIS OF STRUCTURAL ADDITIVITY IN METAL BINDING SITE-SWAPPED HYBRIDS OF RUBREDOXIN
Descriptor:Rubredoxin, ZINC ION, ACETATE ION, ...
Authors:LeMaster, D.M., Anderson, J.S., Wang, L., Guo, Y., Li, H., Hernandez, G.
Deposit date:2007-05-09
Release date:2007-12-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (0.79 Å)
Cite:NMR and X-ray analysis of structural additivity in metal binding site-swapped hybrids of rubredoxin.
Bmc Struct.Biol., 7, 2007
2PVX
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NMR AND X-RAY ANALYSIS OF STRUCTURAL ADDITIVITY IN METAL BINDING SITE-SWAPPED HYBRIDS OF RUBREDOXIN
Descriptor:Rubredoxin, ZINC ION
Authors:Wang, L., LeMaster, D.M., Hernandez, G., Li, H.
Deposit date:2007-05-10
Release date:2007-12-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.04 Å)
Cite:NMR and X-ray analysis of structural additivity in metal binding site-swapped hybrids of rubredoxin
Bmc Struct.Biol., 7, 2007
3BKF
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ZINC-BOUND C-TERMINAL DOMAIN OF NIKR
Descriptor:Nickel-responsive regulator, ZINC ION
Authors:Phillips, C.M., Schreiter, E.R., Drennan, C.L.
Deposit date:2007-12-06
Release date:2008-02-19
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Basis of the Metal Specificity for Nickel Regulatory Protein NikR.
Biochemistry, 47, 2008
3BKT
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COPPER-BOUND C-TERMINAL DOMAIN OF NIKR
Descriptor:Nickel-responsive regulator, COPPER (II) ION
Authors:Phillips, C.M., Schreiter, E.R., Drennan, C.L.
Deposit date:2007-12-07
Release date:2008-02-19
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural Basis of the Metal Specificity for Nickel Regulatory Protein NikR.
Biochemistry, 47, 2008
3BKU
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APO C-TERMINAL DOMAIN OF NIKR
Descriptor:Nickel-responsive regulator
Authors:Phillips, C.M., Schreiter, E.R., Drennan, C.L.
Deposit date:2007-12-07
Release date:2008-02-19
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Basis of the Metal Specificity for Nickel Regulatory Protein NikR.
Biochemistry, 47, 2008