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1TRH
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BU of 1trh by Molmil
TWO CONFORMATIONAL STATES OF CANDIDA RUGOSA LIPASE
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, LIPASE
Authors:Grochulski, P, Cygler, M.
Deposit date:1993-11-18
Release date:1994-01-31
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Two conformational states of Candida rugosa lipase.
Protein Sci., 3, 1994
1CIY
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BU of 1ciy by Molmil
INSECTICIDAL TOXIN: STRUCTURE AND CHANNEL FORMATION
Descriptor: CRYIA(A)
Authors:Grochulski, P, Cygler, M.
Deposit date:1995-06-01
Release date:1997-01-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Bacillus thuringiensis CryIA(a) insecticidal toxin: crystal structure and channel formation.
J.Mol.Biol., 254, 1995
1CRL
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BU of 1crl by Molmil
INSIGHTS INTO INTERFACIAL ACTIVATION FROM AN 'OPEN' STRUCTURE OF CANDIDA RUGOSA LIPASE
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, LIPASE
Authors:Grochulski, P, Cygler, M.
Deposit date:1993-03-02
Release date:1994-01-31
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Insights into interfacial activation from an open structure of Candida rugosa lipase.
J.Biol.Chem., 268, 1993
3RAR
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BU of 3rar by Molmil
X-ray structure of a bound phosphonate transition state analog and enantioselectivity of Candida rugosa lipase toward chiral carboxylic acids
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Grochulski, P, Kazlauskas, R.
Deposit date:2011-03-28
Release date:2011-04-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Insights into the molecular basis of chiral acid recognition by Candida rugosa lipase from an X-ray crystal structure of a bound phosphonate transition state analog
Adv.Synth.Catal., 353, 2011
1AJ5
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BU of 1aj5 by Molmil
CALPAIN DOMAIN VI APO
Descriptor: CALPAIN
Authors:Cygler, M, Grochulski, P, Blanchard, H.
Deposit date:1997-05-15
Release date:1998-05-20
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of a calpain Ca(2+)-binding domain reveals a novel EF-hand and Ca(2+)-induced conformational changes.
Nat.Struct.Biol., 4, 1997
4QPX
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BU of 4qpx by Molmil
NV polymerase post-incorporation-like complex
Descriptor: GLYCEROL, MANGANESE (II) ION, Polyprotein, ...
Authors:Zamyatkin, D.F, Parra, F, Grochulski, P, Ng, K.K.S.
Deposit date:2014-06-25
Release date:2015-04-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Structure of a backtracked state reveals conformational changes similar to the state following nucleotide incorporation in human norovirus polymerase.
Acta Crystallogr.,Sect.D, 70, 2014
5V48
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BU of 5v48 by Molmil
Soluble rabbit neprilysin in complex with thiorphan
Descriptor: (2-MERCAPTOMETHYL-3-PHENYL-PROPIONYL)-GLYCINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Labiuk, S.L, Grochulski, P, Sygusch, J.
Deposit date:2017-03-08
Release date:2018-03-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.9965 Å)
Cite:Structures of soluble rabbit neprilysin complexed with phosphoramidon or thiorphan.
Acta Crystallogr.,Sect.F, 75, 2019
7N02
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BU of 7n02 by Molmil
X-ray crystallographic structure model of Lactococcus lactis prolidase mutant D36S
Descriptor: Aminopeptidase P family protein, MANGANESE (II) ION
Authors:Xu, S, Grochulski, P, Tanaka, T.
Deposit date:2021-05-24
Release date:2021-06-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystallographic structure of recombinant Lactococcus lactis prolidase to support proposed structure-function relationships.
Biochim Biophys Acta Proteins Proteom, 1865, 2017
6XMR
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BU of 6xmr by Molmil
X-ray crystallographic structure model of Lactococcus lactis prolidase mutant H38S
Descriptor: Aminopeptidase P family protein, MANGANESE (II) ION
Authors:Xu, S, Grochulski, P, Tanaka, T.
Deposit date:2020-06-30
Release date:2020-07-15
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystallographic structure of recombinant Lactococcus lactis prolidase to support proposed structure-function relationships.
Biochim Biophys Acta Proteins Proteom, 1865, 2017
4G54
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BU of 4g54 by Molmil
Crystal structure of a periplasmic domain of the EpsAB fusion protein of the Vibrio vulnificus type II secretion system
Descriptor: General Secretion Pathway Protein
Authors:Martynnowski, D, Grochulski, P, Howard, S.P.
Deposit date:2012-07-17
Release date:2013-01-30
Last modified:2013-03-27
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structure of a periplasmic domain of the EpsAB fusion protein of the Vibrio vulnificus type II secretion system.
Acta Crystallogr.,Sect.D, 69, 2013
7K3U
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BU of 7k3u by Molmil
X-ray crystallographic structure model of Lactococcus lactis prolidase mutant R293S
Descriptor: Aminopeptidase P family protein, GLYCEROL, MANGANESE (II) ION
Authors:Xu, S, Grochulski, P, Tanaka, T.
Deposit date:2020-09-13
Release date:2020-09-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystallographic structure of recombinant Lactococcus lactis prolidase to support proposed structure-function relationships.
Biochim Biophys Acta Proteins Proteom, 1865, 2017
3H5X
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BU of 3h5x by Molmil
Crystal Structure of 2'-amino-2'-deoxy-cytidine-5'-triphosphate bound to Norovirus GII RNA polymerase
Descriptor: 2'-amino-2'-deoxycytidine 5'-(tetrahydrogen triphosphate), 5'-R(*UP*GP*CP*CP*CP*GP*GP*G)-3', 5'-R(P*UP*GP*CP*CP*CP*GP*GP*GP*C)-3', ...
Authors:Zamyatkin, D.F, Parra, F, Machin, A, Grochulski, P, Ng, K.K.S.
Deposit date:2009-04-22
Release date:2009-05-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Binding of 2'-amino-2'-deoxycytidine-5'-triphosphate to norovirus polymerase induces rearrangement of the active site.
J.Mol.Biol., 390, 2009
3H5Y
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BU of 3h5y by Molmil
Norovirus polymerase+primer/template+CTP complex at 6 mM MnCl2
Descriptor: 5'-R(*UP*GP*CP*CP*CP*GP*GP*G)-3', 5'-R(P*UP*GP*CP*CP*CP*GP*GP*GP*C)-3', CYTIDINE-5'-TRIPHOSPHATE, ...
Authors:Zamyatkin, D.F, Parra, F, Machin, A, Grochulski, P, Ng, K.K.S.
Deposit date:2009-04-22
Release date:2009-05-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Binding of 2'-amino-2'-deoxycytidine-5'-triphosphate to norovirus polymerase induces rearrangement of the active site.
J.Mol.Biol., 390, 2009
1NP8
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BU of 1np8 by Molmil
18-k C-terminally trunucated small subunit of calpain
Descriptor: CADMIUM ION, Calcium-dependent protease, small subunit
Authors:Leinala, E.K, Arthur, J.S, Grochulski, P, Davies, P.L, Elce, J.S, Jia, Z.
Deposit date:2003-01-17
Release date:2003-11-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:A second binding site revealed by C-terminal truncation of calpain small subunit, a penta-EF-hand protein
PROTEINS: STRUCT.,FUNCT.,GENET., 53, 2003
4XBH
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BU of 4xbh by Molmil
Soluble rabbit neprilysin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Neprilysin, ...
Authors:Labiuk, S.L, Grochulski, P, Sygusch, J.
Deposit date:2014-12-16
Release date:2016-05-25
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.114 Å)
Cite:Structures of soluble rabbit neprilysin complexed with phosphoramidon or thiorphan.
Acta Crystallogr.,Sect.F, 75, 2019
4ZNG
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BU of 4zng by Molmil
X-ray crystallography of recombinant Lactococcus lactis prolidase
Descriptor: CACODYLATE ION, GLYCEROL, MANGANESE (II) ION, ...
Authors:Kgosisejo, O, Grochulski, P, Tanaka, T.
Deposit date:2015-05-04
Release date:2016-08-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:X-ray crystallography of recombinant Lactococcus lactis prolidase
To Be Published
4ZR5
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BU of 4zr5 by Molmil
Soluble rabbit neprilysin in complex with phosphoramidon
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, N-ALPHA-L-RHAMNOPYRANOSYLOXY(HYDROXYPHOSPHINYL)-L-LEUCYL-L-TRYPTOPHAN, ...
Authors:Labiuk, S.L, Grochulski, P, Sygusch, J.
Deposit date:2015-05-11
Release date:2016-06-08
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.8016 Å)
Cite:Structures of soluble rabbit neprilysin complexed with phosphoramidon or thiorphan.
Acta Crystallogr.,Sect.F, 75, 2019
2I1Q
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BU of 2i1q by Molmil
RadA Recombinase in complex with Calcium
Descriptor: CALCIUM ION, DNA repair and recombination protein radA, MAGNESIUM ION, ...
Authors:Qian, X, He, Y, Ma, X, Fodje, M.N, Grochulski, P, Luo, Y.
Deposit date:2006-08-14
Release date:2006-10-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Calcium Stiffens Archaeal Rad51 Recombinase from Methanococcus voltae for Homologous Recombination.
J.Biol.Chem., 281, 2006
1MIR
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BU of 1mir by Molmil
RAT PROCATHEPSIN B
Descriptor: PROCATHEPSIN B
Authors:Cygler, M, Sivaraman, J, Grochulski, P, Coulombe, R, Storer, A.C, Mort, J.S.
Deposit date:1996-01-12
Release date:1997-01-11
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of rat procathepsin B: model for inhibition of cysteine protease activity by the proregion.
Structure, 4, 1996
1CJL
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BU of 1cjl by Molmil
CRYSTAL STRUCTURE OF A CYSTEINE PROTEASE PROFORM
Descriptor: PROCATHEPSIN L
Authors:Coulombe, R, Grochulski, P, Sivaraman, J, Cygler, M.
Deposit date:1996-07-24
Release date:1997-08-12
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of human procathepsin L reveals the molecular basis of inhibition by the prosegment.
EMBO J., 15, 1996
1DVI
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BU of 1dvi by Molmil
CALPAIN DOMAIN VI WITH CALCIUM BOUND
Descriptor: CALCIUM ION, CALPAIN
Authors:Cygler, M, Blanchard, H, Grochulski, P.
Deposit date:1997-05-15
Release date:1998-05-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of a calpain Ca(2+)-binding domain reveals a novel EF-hand and Ca(2+)-induced conformational changes.
Nat.Struct.Biol., 4, 1997
1EUN
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BU of 1eun by Molmil
STRUCTURE OF 2-KETO-3-DEOXY-6-PHOSPHOGLUCONATE ALDOLASE FROM ESCHERICHIA COLI
Descriptor: KDPG ALDOLASE, SULFATE ION
Authors:Allard, J, Grochulski, P, Sygusch, J.
Deposit date:2000-04-17
Release date:2001-02-07
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Covalent intermediate trapped in 2-keto-3-deoxy-6- phosphogluconate (KDPG) aldolase structure at 1.95-A resolution.
Proc.Natl.Acad.Sci.USA, 98, 2001
1EUA
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BU of 1eua by Molmil
SCHIFF BASE INTERMEDIATE IN KDPG ALDOLASE FROM ESCHERICHIA COLI
Descriptor: ACETATE ION, KDPG ALDOLASE, PYRUVIC ACID, ...
Authors:Allard, J, Grochulski, P, Sygusch, J.
Deposit date:2000-04-14
Release date:2001-02-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Covalent intermediate trapped in 2-keto-3-deoxy-6- phosphogluconate (KDPG) aldolase structure at 1.95-A resolution.
Proc.Natl.Acad.Sci.USA, 98, 2001
1F2E
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BU of 1f2e by Molmil
STRUCTURE OF SPHINGOMONAD, GLUTATHIONE S-TRANSFERASE COMPLEXED WITH GLUTATHIONE
Descriptor: GLUTATHIONE, GLUTATHIONE S-TRANSFERASE
Authors:Nishio, T, Watanabe, T, Patel, A, Wang, Y, Lau, P.C.K, Grochulski, P, Li, Y, Cygler, M.
Deposit date:2000-05-24
Release date:2000-06-21
Last modified:2011-12-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Properties of a Sphingomonad and Marine Bacterium Beta-Class Glutathione S-Transferases and Crystal Structure of the Former Complex with Glutathione
To be published
1LPP
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BU of 1lpp by Molmil
ANALOGS OF REACTION INTERMEDIATES IDENTIFY A UNIQUE SUBSTRATE BINDING SITE IN CANDIDA RUGOSA LIPASE
Descriptor: 1-HEXADECANOSULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Grochulski, P.G, Cygler, M.C.
Deposit date:1995-01-17
Release date:1995-04-20
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Analogs of reaction intermediates identify a unique substrate binding site in Candida rugosa lipase.
Biochemistry, 33, 1994

 

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