Author results

2BRD
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CRYSTAL STRUCTURE OF BACTERIORHODOPSIN IN PURPLE MEMBRANE
Descriptor:BACTERIORHODOPSIN, PHOSPHORIC ACID 2,3-BIS-(3,7,11,15-TETRAMETHYL-HEXADECYLOXY)-PROPYL ESTER 2-HYDROXO-3-PHOSPHONOOXY-PROPYL ESTER, RETINAL
Authors:Henderson, R., Grigorieff, N.
Deposit date:1995-12-27
Release date:1996-06-10
Modification date:2012-05-30
Method:ELECTRON CRYSTALLOGRAPHY (3.5 Å)
Cite:Electron-crystallographic refinement of the structure of bacteriorhodopsin.
J.Mol.Biol., 259, 1996
1XI4
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CLATHRIN D6 COAT
Descriptor:Clathrin heavy chain, Clathrin light chain A
Authors:Fotin, A., Cheng, Y., Sliz, P., Grigorieff, N., Harrison, S.C., Kirchhausen, T., Walz, T.
Deposit date:2004-09-21
Release date:2004-11-02
Modification date:2011-05-04
Method:ELECTRON MICROSCOPY (7.9 Å)
Cite:Molecular model for a complete clathrin lattice from electron cryomicroscopy
Nature, 432, 2004
1XI5
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CLATHRIN D6 COAT WITH AUXILIN J-DOMAIN
Descriptor:Clathrin heavy chain, Auxilin J-domain
Authors:Fotin, A., Cheng, Y., Grigorieff, N., Walz, T., Harrison, S.C., Kirchhausen, T.
Deposit date:2004-09-21
Release date:2004-11-02
Modification date:2011-05-04
Method:ELECTRON MICROSCOPY (12 Å)
Cite:Structure of an auxilin-bound clathrin coat and its implications for the mechanism of uncoating
Nature, 432, 2004
3IYV
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CLATHRIN D6 COAT AS FULL-LENGTH TRISKELIONS
Descriptor:Clathrin heavy chain 1, Clathrin light chain A
Authors:Johnson, G.T., Fotin, A., Cheng, Y., Sliz, P., Grigorieff, N., Harrison, S.C., Kirchhausen, T., Walz, T.
Deposit date:2010-06-17
Release date:2010-07-21
Modification date:2010-07-28
Method:ELECTRON MICROSCOPY (7.9 Å)
Cite:Molecular model for a complete clathrin lattice from electron cryomicroscopy.
Nature, 432, 2004
5B3J
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ACTIVATION OF NMDA RECEPTORS AND THE MECHANISM OF INHIBITION BY IFENPRODIL
Descriptor:NMDA glutamate receptor subunit, Glutamate receptor ionotropic, NMDA 2B, Fab, heavy chain, Fab, light chain
Authors:Tajima, N., Karakas, E., Grant, T., Simorowski, N., Diaz-Avalos, R., Grigorieff, N., Furukawa, H.
Deposit date:2016-03-01
Release date:2016-05-11
Modification date:2016-06-15
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Activation of NMDA receptors and the mechanism of inhibition by ifenprodil
Nature, 534, 2016
5FXG
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GLUN1B-GLUN2B NMDA RECEPTOR IN ACTIVE CONFORMATION
Descriptor:N-METHYL-D-ASPARTATE RECEPTOR GLUN1, N-METHYL-D-ASPARTATE RECEPTOR GLUN2B
Authors:Tajima, N., Karakas, E., Grant, T., Simorowski, N., Diaz-Avalos, R., Grigorieff, N., Furukawa, H.
Deposit date:2016-03-02
Release date:2016-05-11
Modification date:2016-06-15
Method:ELECTRON MICROSCOPY (6.8 Å)
Cite:Activation of Nmda Receptors and the Mechanism of Inhibition by Ifenprodil.
Nature, 534, 2016
5FXH
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GLUN1B-GLUN2B NMDA RECEPTOR IN NON-ACTIVE-1 CONFORMATION
Descriptor:N-METHYL-D-ASPARTATE RECEPTOR GLUN1, N-METHYL-D-ASPARTATE RECEPTOR GLUN2B
Authors:Tajima, N., Karakas, E., Grant, T., Simorowski, N., Diaz-Avalos, R., Grigorieff, N., Furukawa, H.
Deposit date:2016-03-02
Release date:2016-05-11
Modification date:2016-06-15
Method:ELECTRON MICROSCOPY (6.1 Å)
Cite:Activation of Nmda Receptors and the Mechanism of Inhibition by Ifenprodil.
Nature, 534, 2016
5FXI
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GLUN1B-GLUN2B NMDA RECEPTOR STRUCTURE IN NON-ACTIVE-2 CONFORMATION
Descriptor:N-METHYL-D-ASPARTATE RECEPTOR GLUN1, N-METHYL-D-ASPARTATE RECEPTOR GLUN2B
Authors:Tajima, N., Karakas, E., Grant, T., Simorowski, N., Diaz-Avalos, R., Grigorieff, N., Furukawa, H.
Deposit date:2016-03-02
Release date:2016-05-11
Modification date:2016-06-15
Method:ELECTRON MICROSCOPY (6.4 Å)
Cite:Activation of Nmda Receptors and the Mechanism of Inhibition by Ifenprodil.
Nature, 534, 2016
5FXJ
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GLUN1B-GLUN2B NMDA RECEPTOR STRUCTURE-CLASS X
Descriptor:GLUTAMATE RECEPTOR IONOTROPIC, NMDA 1, GLUTAMATE RECEPTOR IONOTROPIC, NMDA 2B
Authors:Tajima, N., Karakas, E., Grant, T., Simorowski, N., Diaz-Avalos, R., Grigorieff, N., Furukawa H, H.
Deposit date:2016-03-02
Release date:2016-05-25
Modification date:2016-06-15
Method:ELECTRON MICROSCOPY (6.5 Å)
Cite:Activation of Nmda Receptors and the Mechanism of Inhibition by Ifenprodil.
Nature, 534, 2016
5FXK
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GLUN1B-GLUN2B NMDA RECEPTOR STRUCTURE-CLASS Y
Descriptor:N-METHYL-D-ASPARTATE RECEPTOR GLUN1, N-METHYL-D-ASPARTATE RECEPTOR GLUN2B
Authors:Tajima, N., Karakas, E., Grant, T., Simorowski, N., Diaz-Avalos, R., Grigorieff, N., Furukawa, H.
Deposit date:2016-03-02
Release date:2016-05-11
Modification date:2016-06-15
Method:ELECTRON MICROSCOPY (6.4 Å)
Cite:Activation of Nmda Receptors and the Mechanism of Inhibition by Ifenprodil.
Nature, 534, 2016
5J0N
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LAMBDA EXCISION HJ INTERMEDIATE
Descriptor:Integrase, Integration host factor subunit alpha, Integration host factor subunit beta, Excisionase/DNA Complex
Authors:Van Duyne, G., Grigorieff, N., Landy, A.
Deposit date:2016-03-28
Release date:2017-02-08
Method:ELECTRON MICROSCOPY (11 Å)
Cite:Structure of a Holliday junction complex reveals mechanisms governing a highly regulated DNA transaction.
Elife, 5, 2016
3GZT
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VP7 RECOATED ROTAVIRUS DLP
Descriptor:Outer capsid glycoprotein VP7
Authors:Chen, J.Z., Settembre, E.C., Harrison, S.C., Grigorieff, N.
Deposit date:2009-04-07
Release date:2009-07-14
Modification date:2011-07-13
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Molecular interactions in rotavirus assembly and uncoating seen by high-resolution cryo-EM
Proc.Natl.Acad.Sci.USA, 106, 2009
3GZU
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VP7 RECOATED ROTAVIRUS DLP
Descriptor:Inner capsid protein VP2, Intermediate capsid protein VP6
Authors:Chen, J.Z., Settembre, E.C., Harrison, S.C., Grigorieff, N.
Deposit date:2009-04-07
Release date:2009-07-14
Modification date:2009-08-18
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Molecular interactions in rotavirus assembly and uncoating seen by high-resolution cryo-EM.
Proc.Natl.Acad.Sci.USA, 106, 2009
3IYJ
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BOVINE PAPILLOMAVIRUS TYPE 1 OUTER CAPSID
Descriptor:Major capsid protein L1
Authors:Wolf, M., Garcea, R.L., Grigorieff, N., Harrison, S.C.
Deposit date:2009-12-15
Release date:2010-01-26
Modification date:2010-05-05
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Subunit interactions in bovine papillomavirus.
Proc.Natl.Acad.Sci.USA, 107, 2010
3IZ0
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HUMAN NDC80 BONSAI DECORATED MICROTUBULE
Descriptor:hain B, Beta tubulin from PDB 1JFF hain C, D, Ndc80-SPC25 Chimera from PDB 2VE7, residues 79-437 hain E, F, NUF2-SPC24 Chimera from PDB 2VE7, residues 4-156 (C
Authors:Alushin, G.M., Ramey, V.H., Pasqualato, S., Ball, D.A., Grigorieff, N., Musacchio, A., Nogales, E.
Deposit date:2010-08-09
Release date:2010-10-13
Modification date:2013-06-19
Method:ELECTRON MICROSCOPY (8.6 Å)
Cite:The Ndc80 kinetochore complex forms oligomeric arrays along microtubules.
Nature, 467, 2010
3J6X
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S. CEREVISIAE 80S RIBOSOME BOUND WITH TAURA SYNDROME VIRUS (TSV) IRES, 5 DEGREE ROTATION (CLASS II)
Descriptor:PROTEIN/RNA Complex
Authors:Koh, C.S., Brilot, A.F., Grigorieff, N., Korostelev, A.A.
Deposit date:2014-04-16
Release date:2014-06-11
Modification date:2014-12-17
Method:ELECTRON MICROSCOPY (6.1 Å)
Cite:Taura syndrome virus IRES initiates translation by binding its tRNA-mRNA-like structural element in the ribosomal decoding center.
Proc.Natl.Acad.Sci.USA, 111, 2014
3J6Y
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S. CEREVISIAE 80S RIBOSOME BOUND WITH TAURA SYNDROME VIRUS (TSV) IRES, 2 DEGREE ROTATION (CLASS I)
Descriptor:PROTEIN/RNA Complex
Authors:Koh, C.S., Brilot, A.F., Grigorieff, N., Korostelev, A.A.
Deposit date:2014-04-16
Release date:2014-06-11
Modification date:2014-12-17
Method:ELECTRON MICROSCOPY (6.1 Å)
Cite:Taura syndrome virus IRES initiates translation by binding its tRNA-mRNA-like structural element in the ribosomal decoding center.
Proc.Natl.Acad.Sci.USA, 111, 2014
3J77
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STRUCTURES OF YEAST 80S RIBOSOME-TRNA COMPLEXES IN THE ROTATED AND NON-ROTATED CONFORMATIONS (CLASS II - ROTATED RIBOSOME WITH 1 TRNA)
Descriptor:60S ribosomal protein L1, 60S ribosomal protein L2, 60S ribosomal protein L3, 60S ribosomal protein L4, 60S ribosomal protein L5, 60S ribosomal protein L6, 60S ribosomal protein L7, 60S ribosomal protein L8, 60S ribosomal protein L9, 60S ribosomal protein L10, 60S ribosomal protein L11, 60S ribosomal protein L12, 60S ribosomal protein L13, 60S ribosomal protein L14, 60S ribosomal protein L15, 60S ribosomal protein L16, 60S ribosomal protein L17, 60S ribosomal protein L18, 60S ribosomal protein L19, 60S ribosomal protein L20, 60S ribosomal protein L21, 60S ribosomal protein L22, 60S ribosomal protein L23, 60S ribosomal protein L24, 60S ribosomal protein L25, 60S ribosomal protein L26, 60S ribosomal protein L27, 60S ribosomal protein L28, 60S ribosomal protein L29, 60S ribosomal protein L30, 60S ribosomal protein L31, 60S ribosomal protein L32, 60S ribosomal protein L33, 60S ribosomal protein L34, 60S ribosomal protein L35, 60S ribosomal protein L36, 60S ribosomal protein L37, 60S ribosomal protein L38, 60S ribosomal protein L39, 60S ribosomal protein L40, 60S ribosomal protein L41, 60S ribosomal protein L42, 60S ribosomal protein L43, 60S acidic ribosomal protein P0, Guanine nucleotide-binding protein subunit beta-like protein, 40S ribosomal protein S0, 40S ribosomal protein S1, 40S ribosomal protein S2, 40S ribosomal protein S3, 40S ribosomal protein S4, 40S ribosomal protein S5, 40S ribosomal protein S6, 40S ribosomal protein S7, 40S ribosomal protein S8, 40S ribosomal protein S9, 40S ribosomal protein S10, 40S ribosomal protein S11, 40S ribosomal protein S12, 40S ribosomal protein S13, 40S ribosomal protein S14, 40S ribosomal protein S15, 40S ribosomal protein S16, 40S ribosomal protein S17, 40S ribosomal protein S18, 40S ribosomal protein S19, 40S ribosomal protein S20, 40S ribosomal protein S21, 40S ribosomal protein S22, 40S ribosomal protein S23, 40S ribosomal protein S24, 40S ribosomal protein S25, 40S ribosomal protein S26, 40S ribosomal protein S27, 40S ribosomal protein S28, 40S ribosomal protein S29, 40S ribosomal protein S30, 40S ribosomal protein S31
Authors:Svidritskiy, E., Brilot, A.F., Koh, C.S., Grigorieff, N., Korostelev, A.A.
Deposit date:2014-05-29
Release date:2014-08-06
Modification date:2014-12-17
Method:ELECTRON MICROSCOPY (6.2 Å)
Cite:Structures of Yeast 80S Ribosome-tRNA Complexes in the Rotated and Nonrotated Conformations.
Structure, 22, 2014
3J78
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STRUCTURES OF YEAST 80S RIBOSOME-TRNA COMPLEXES IN THE ROTATED AND NON-ROTATED CONFORMATIONS (CLASS I - NON-ROTATED RIBOSOME WITH 2 TRNAS)
Descriptor:60S ribosomal protein L1, 60S ribosomal protein L2, 60S ribosomal protein L3, 60S ribosomal protein L4, 60S ribosomal protein L5, 60S ribosomal protein L6, 60S ribosomal protein L7, 60S ribosomal protein L8, 60S ribosomal protein L9, 60S ribosomal protein L10, 60S ribosomal protein L11, 60S ribosomal protein L12, 60S ribosomal protein L13, 60S ribosomal protein L14, 60S ribosomal protein L15, 60S ribosomal protein L16, 60S ribosomal protein L17, 60S ribosomal protein L18, 60S ribosomal protein L19, 60S ribosomal protein L20, 60S ribosomal protein L21, 60S ribosomal protein L22, 60S ribosomal protein L23, 60S ribosomal protein L24, 60S ribosomal protein L25, 60S ribosomal protein L26, 60S ribosomal protein L27, 60S ribosomal protein L28, 60S ribosomal protein L29, 60S ribosomal protein L30, 60S ribosomal protein L31, 60S ribosomal protein L32, 60S ribosomal protein L33, 60S ribosomal protein L34, 60S ribosomal protein L35, 60S ribosomal protein L36, 60S ribosomal protein L37, 60S ribosomal protein L38, 60S ribosomal protein L39, 60S ribosomal protein L40, 60S ribosomal protein L41, 60S ribosomal protein L42, 60S ribosomal protein L43, 60S acidic ribosomal protein P0, Guanine nucleotide-binding protein subunit beta-like protein, 40S ribosomal protein S0, 40S ribosomal protein S1, 40S ribosomal protein S2, 40S ribosomal protein S3, 40S ribosomal protein S4, 40S ribosomal protein S5, 40S ribosomal protein S6, 40S ribosomal protein S7, 40S ribosomal protein S8, 40S ribosomal protein S9, 40S ribosomal protein S10, 40S ribosomal protein S11, 40S ribosomal protein S12, 40S ribosomal protein S13, 40S ribosomal protein S14, 40S ribosomal protein S15, 40S ribosomal protein S16, 40S ribosomal protein S17, 40S ribosomal protein S18, 40S ribosomal protein S19, 40S ribosomal protein S20, 40S ribosomal protein S21, 40S ribosomal protein S22, 40S ribosomal protein S23, 40S ribosomal protein S24, 40S ribosomal protein S25, 40S ribosomal protein S26, 40S ribosomal protein S27, 40S ribosomal protein S28, 40S ribosomal protein S29, 40S ribosomal protein S30, 40S ribosomal protein S31
Authors:Svidritskiy, E., Brilot, A.F., Koh, C.S., Grigorieff, N., Korostelev, A.A.
Deposit date:2014-05-29
Release date:2014-08-06
Modification date:2014-12-17
Method:ELECTRON MICROSCOPY (6.3 Å)
Cite:Structures of Yeast 80S Ribosome-tRNA Complexes in the Rotated and Nonrotated Conformations.
Structure, 22, 2014
3J9S
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SINGLE PARTICLE CRYO-EM STRUCTURE OF ROTAVIRUS VP6 AT 2.6 ANGSTROM RESOLUTION
Descriptor:Intermediate capsid protein VP6
Authors:Grant, T., Grigorieff, N.
Deposit date:2015-02-19
Release date:2015-03-11
Modification date:2015-09-02
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Measuring the optimal exposure for single particle cryo-EM using a 2.6 angstrom reconstruction of rotavirus VP6.
Elife, 4, 2015
4AU6
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LOCATION OF THE DSRNA-DEPENDENT POLYMERASE, VP1, IN ROTAVIRUS PARTICLES
Descriptor:RNA-DEPENDENT RNA POLYMERASE (E.C.2.7.7.48)
Authors:Estrozi, L.F., Settembre, E.C., Goret, G., McClain, B., Zhang, X., Chen, J.Z., Grigorieff, N., Harrison, S.C.
Deposit date:2012-05-14
Release date:2012-06-13
Modification date:2013-03-20
Method:ELECTRON MICROSCOPY (6 Å)
Cite:Location of the Dsrna-Dependent Polymerase, Vp1, in Rotavirus Particles.
J.Mol.Biol., 425, 2013
4DFC
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CORE UVRA/TRCF COMPLEX
Descriptor:Transcription-repair-coupling factor (E.C.3.6.4.-), UvrABC system protein A (E.C.3.6.1.3 )
Authors:Deaconescu, A.M., Grigorieff, N.
Deposit date:2012-01-23
Release date:2012-05-02
Method:X-RAY DIFFRACTION (2.803 Å)
Cite:Nucleotide excision repair (NER) machinery recruitment by the transcription-repair coupling factor involves unmasking of a conserved intramolecular interface.
Proc.Natl.Acad.Sci.USA, 109, 2012
4F5X
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LOCATION OF THE DSRNA-DEPENDENT POLYMERASE, VP1, IN ROTAVIRUS PARTICLES
Descriptor:Inner capsid protein VP2, Intermediate capsid protein VP6, RNA-directed RNA polymerase (E.C.2.7.7.48)
Authors:Estrozi, L.F., Settembre, E.C., Goret, G., McClain, B., Zhang, X., Chen, J.Z., Grigorieff, N., Harrison, S.C.
Deposit date:2012-05-13
Release date:2012-10-24
Modification date:2013-01-16
Method:X-RAY DIFFRACTION (5 Å)
Cite:Location of the dsRNA-Dependent Polymerase, VP1, in Rotavirus Particles.
J.Mol.Biol., 425, 2013
4V7C
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STRUCTURE OF THE RIBOSOME WITH ELONGATION FACTOR G TRAPPED IN THE PRE-TRANSLOCATION STATE (PRE-TRANSLOCATION 70S*TRNA STRUCTURE)
Descriptor:PROTEIN/RNA Complex
Authors:Brilot, A.F., Korostelev, A.A., Ermolenko, D.N., Grigorieff, N.
Deposit date:2013-11-20
Release date:2014-07-09
Modification date:2014-12-10
Method:ELECTRON MICROSCOPY (7.6 Å)
Cite:Structure of the ribosome with elongation factor G trapped in the pretranslocation state.
Proc.Natl.Acad.Sci.USA, 110, 2013
4V7D
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STRUCTURE OF THE RIBOSOME WITH ELONGATION FACTOR G TRAPPED IN THE PRE-TRANSLOCATION STATE (PRE-TRANSLOCATION 70S*TRNA*EF-G STRUCTURE)
Descriptor:PROTEIN/RNA Complex
Authors:Brilot, A.F., Korostelev, A.A., Ermolenko, D.N., Grigorieff, N.
Deposit date:2013-11-21
Release date:2014-07-09
Modification date:2014-12-17
Method:ELECTRON MICROSCOPY (7.6 Å)
Cite:Structure of the ribosome with elongation factor G trapped in the pretranslocation state.
Proc.Natl.Acad.Sci.USA, 110, 2013
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