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7UQ6
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BU of 7uq6 by Molmil
tRNA T-box antiterminator fusion, construct #4
Descriptor: BARIUM ION, POTASSIUM ION, RNA (86-MER)
Authors:Grigg, J.C, Price, I.R, Ke, A.
Deposit date:2022-04-19
Release date:2022-06-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.951 Å)
Cite:tRNA Fusion to Streamline RNA Structure Determination: Case Studies in Probing Aminoacyl-tRNA Sensing Mechanisms by the T-Box Riboswitch
Crystals, 12, 2022
3LI2
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BU of 3li2 by Molmil
Closed Conformation of HtsA Complexed with Staphyloferrin A
Descriptor: (2R)-2-(2-{[(1R)-1-carboxy-4-{[(3S)-3,4-dicarboxy-3-hydroxybutanoyl]amino}butyl]amino}-2-oxoethyl)-2-hydroxybutanedioic acid, ACETATE ION, FE (III) ION, ...
Authors:Grigg, J.C, Murphy, M.E.P.
Deposit date:2010-01-23
Release date:2010-02-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Staphylococcus aureus siderophore receptor HtsA undergoes localized conformational changes to enclose staphyloferrin A in an arginine-rich binding pocket.
J.Biol.Chem., 285, 2010
3LHS
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BU of 3lhs by Molmil
Open Conformation of HtsA Complexed with Staphyloferrin A
Descriptor: (2R)-2-(2-{[(1R)-1-carboxy-4-{[(3S)-3,4-dicarboxy-3-hydroxybutanoyl]amino}butyl]amino}-2-oxoethyl)-2-hydroxybutanedioic acid, FE (III) ION, Ferrichrome ABC transporter lipoprotein, ...
Authors:Grigg, J.C, Murphy, M.E.P.
Deposit date:2010-01-23
Release date:2010-02-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:The Staphylococcus aureus siderophore receptor HtsA undergoes localized conformational changes to enclose staphyloferrin A in an arginine-rich binding pocket.
J.Biol.Chem., 285, 2010
3BDG
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BU of 3bdg by Molmil
Crystal structure of wild-type/T155V mixed dimer of E. coli alkaline phosphatase
Descriptor: Alkaline phosphatase, SULFATE ION
Authors:Grigg, J.C, Murphy, M.E.
Deposit date:2007-11-14
Release date:2008-11-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The Active-Site Trimetallic Cluster of Alkaline Phosphatase is Lost Upon Isosteric Mutation at the Mg2+-Coordinating Residue Threonine-155
To be Published
3BDF
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BU of 3bdf by Molmil
Crystal structure of metal-free E. coli alkaline phosphatase (T155V)
Descriptor: Alkaline phosphatase, SULFATE ION
Authors:Grigg, J.C, Murphy, M.E.
Deposit date:2007-11-14
Release date:2008-11-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The Active-Site Trimetallic Cluster of Alkaline Phosphatase is Lost Upon Isosteric Mutation at the Mg2+-Coordinating Residue Threonine-155
To be Published
2ITF
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BU of 2itf by Molmil
Crystal structure IsdA NEAT domain from Staphylococcus aureus with heme bound
Descriptor: Iron-regulated surface determinant protein A, PROTOPORPHYRIN IX CONTAINING FE
Authors:Grigg, J.C, Vermeiren, C.L, Heinrichs, D.E, Murphy, M.E.
Deposit date:2006-10-19
Release date:2006-12-26
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Haem recognition by a Staphylococcus aureus NEAT domain.
Mol.Microbiol., 63, 2007
2ITE
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BU of 2ite by Molmil
Crystal structure of the IsdA NEAT domain from Staphylococcus aureus
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, Iron-regulated surface determinant protein A
Authors:Grigg, J.C, Vermeiren, C.L, Heinrichs, D.E, Murphy, M.E.
Deposit date:2006-10-19
Release date:2006-12-26
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Haem recognition by a Staphylococcus aureus NEAT domain.
Mol.Microbiol., 63, 2007
4JRC
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BU of 4jrc by Molmil
Distal Stem I region from G. kaustophilus glyQS T box RNA
Descriptor: Distal Stem I region of the glyQS T box leader RNA, MAGNESIUM ION
Authors:Grigg, J.C, Ke, A.
Deposit date:2013-03-21
Release date:2013-04-24
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.673 Å)
Cite:T box RNA decodes both the information content and geometry of tRNA to affect gene expression.
Proc.Natl.Acad.Sci.USA, 110, 2013
3BDH
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BU of 3bdh by Molmil
Crystal structure of zinc-deficient wild-type E. coli alkaline phosphatase
Descriptor: Alkaline phosphatase, MAGNESIUM ION
Authors:Grigg, J.C, Murphy, M.E.
Deposit date:2007-11-14
Release date:2008-11-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The Active-Site Trimetallic Cluster of Alkaline Phosphatase is Lost Upon Isosteric Mutation at the Mg2+-Coordinating Residue Threonine-155
To be Published
2Q8Q
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BU of 2q8q by Molmil
Crystal Structure of S. aureus IsdE complexed with heme
Descriptor: Iron-regulated surface determinant E, PROTOPORPHYRIN IX CONTAINING FE
Authors:Grigg, J.C, Murphy, M.E.
Deposit date:2007-06-11
Release date:2007-07-31
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Heme Coordination by Staphylococcus aureus IsdE.
J.Biol.Chem., 282, 2007
2Q8P
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BU of 2q8p by Molmil
Crystal Structure of selenomethionine labelled S. aureus IsdE complexed with heme
Descriptor: Iron-regulated surface determinant E, PROTOPORPHYRIN IX CONTAINING FE
Authors:Grigg, J.C, Murphy, M.E.
Deposit date:2007-06-11
Release date:2007-07-31
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Heme Coordination by Staphylococcus aureus IsdE.
J.Biol.Chem., 282, 2007
4MGM
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BU of 4mgm by Molmil
Crystal structure of the in vitro transcribed G. kaustophilus tRNA-Gly
Descriptor: MAGNESIUM ION, tRNA glycine
Authors:Grigg, J.C, Ke, A.
Deposit date:2013-08-28
Release date:2013-10-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural Determinants for Geometry and Information Decoding of tRNA by T Box Leader RNA.
Structure, 21, 2013
4MGN
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BU of 4mgn by Molmil
Co-crystal structure of the G. kaustophilus glyQS T box riboswitch Stem I in complex with tRNA
Descriptor: MAGNESIUM ION, glyQS T box riboswitch, tRNA-glycine
Authors:Grigg, J.C, Ke, A.
Deposit date:2013-08-28
Release date:2013-10-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural Determinants for Geometry and Information Decoding of tRNA by T Box Leader RNA.
Structure, 21, 2013
3MWG
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BU of 3mwg by Molmil
Crystal structure of Staphylococcus aureus SirA
Descriptor: Iron-regulated ABC transporter siderophore-binding protein SirA
Authors:Grigg, J.C, Murphy, M.E.P.
Deposit date:2010-05-05
Release date:2010-09-01
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Staphylococcus aureus SirA specificity for staphyloferrin B is driven by localized conformational change
To be Published
3MWF
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BU of 3mwf by Molmil
Crystal structure of Staphylococcus aureus SirA complexed with staphyloferrin B
Descriptor: 5-[(2-{[(3S)-5-{[(2S)-2-amino-2-carboxyethyl]amino}-3-carboxy-3-hydroxy-5-oxopentanoyl]amino}ethyl)amino]-2,5-dioxopentanoic acid, FE (III) ION, Iron-regulated ABC transporter siderophore-binding protein SirA
Authors:Grigg, J.C, Murphy, M.E.P.
Deposit date:2010-05-05
Release date:2010-09-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Staphylococcus aureus SirA specificity for staphyloferrin B is driven by localized conformational change
To be Published
3QZP
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BU of 3qzp by Molmil
Staphylococcus aureus IsdA NEAT domain in complex with cobalt-protoporphyrin IX
Descriptor: GLYCEROL, Iron-regulated surface determinant protein A, PROTOPORPHYRIN IX CONTAINING CO, ...
Authors:Grigg, J.C, Mao, C.X, Murphy, M.E.P.
Deposit date:2011-03-06
Release date:2011-08-31
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Iron-Coordinating Tyrosine Is a Key Determinant of NEAT Domain Heme Transfer.
J.Mol.Biol., 413, 2011
3QZM
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BU of 3qzm by Molmil
Staphylococcus aureus IsdA NEAT domain H83A variant in complex with heme
Descriptor: GLYCEROL, Iron-regulated surface determinant protein A, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Grigg, J.C, Mao, C.X, Murphy, M.E.P.
Deposit date:2011-03-06
Release date:2011-08-31
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Iron-Coordinating Tyrosine Is a Key Determinant of NEAT Domain Heme Transfer.
J.Mol.Biol., 413, 2011
3QZL
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BU of 3qzl by Molmil
Staphylococcus aureus IsdA NEAT domain K75A variant in complex with heme
Descriptor: GLYCEROL, Iron-regulated surface determinant protein A, PROTOPORPHYRIN IX CONTAINING FE
Authors:Grigg, J.C, Mao, C.X, Murphy, M.E.P.
Deposit date:2011-03-06
Release date:2011-08-31
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Iron-Coordinating Tyrosine Is a Key Determinant of NEAT Domain Heme Transfer.
J.Mol.Biol., 413, 2011
3QZO
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BU of 3qzo by Molmil
Staphylococcus aureus IsdA NEAT domain in complex with heme, reduced crystal
Descriptor: GLYCEROL, Iron-regulated surface determinant protein A, PROTOPORPHYRIN IX CONTAINING FE
Authors:Grigg, J.C, Mao, C.X, Murphy, M.E.P.
Deposit date:2011-03-06
Release date:2011-08-31
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.952 Å)
Cite:Iron-Coordinating Tyrosine Is a Key Determinant of NEAT Domain Heme Transfer.
J.Mol.Biol., 413, 2011
3QZN
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BU of 3qzn by Molmil
Staphylococcus aureus IsdA NEAT domain Y166A variant in complex with heme
Descriptor: GLYCEROL, Iron-regulated surface determinant protein A, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Grigg, J.C, Mao, C.X, Murphy, M.E.P.
Deposit date:2011-03-06
Release date:2011-08-31
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Iron-Coordinating Tyrosine Is a Key Determinant of NEAT Domain Heme Transfer.
J.Mol.Biol., 413, 2011
6C27
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BU of 6c27 by Molmil
SAM-III riboswitch ON-state
Descriptor: COBALT HEXAMMINE(III), SAM-III riboswitch
Authors:Grigg, J.C, Price, I.R, Ke, A.
Deposit date:2018-01-07
Release date:2019-01-09
Last modified:2022-03-23
Method:X-RAY DIFFRACTION (3.601 Å)
Cite:Evidence for two-tiered conformation selection in the SAM-III riboswitch
To Be Published
7UZ0
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BU of 7uz0 by Molmil
AntiT-tRNA flip UCCA
Descriptor: AntiT-tRNA flip UCCA, MAGNESIUM ION, STRONTIUM ION
Authors:Price, I.R, Grigg, J.C, Ke, A.
Deposit date:2022-05-07
Release date:2022-06-08
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.03 Å)
Cite:tRNA Fusion to Streamline RNA Structure Determination: Case Studies in Probing Aminoacyl-tRNA Sensing Mechanisms by the T-Box Riboswitch
Crystals, 12, 2022
5D84
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BU of 5d84 by Molmil
Staphyloferrin B precursor biosynthetic enzyme SbnA bound to PLP
Descriptor: MAGNESIUM ION, PYRIDOXAL-5'-PHOSPHATE, Probable siderophore biosynthesis protein SbnA
Authors:Grigg, J.C, Kobylarz, M.J, Liu, Y, Lee, M.S.F, Heinrichs, D.E, Murphy, M.E.P.
Deposit date:2015-08-15
Release date:2016-02-03
Last modified:2020-01-08
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Deciphering the Substrate Specificity of SbnA, the Enzyme Catalyzing the First Step in Staphyloferrin B Biosynthesis.
Biochemistry, 55, 2016
4HOV
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BU of 4hov by Molmil
DypB N246A in complex with manganese
Descriptor: CHLORIDE ION, DypB, FORMIC ACID, ...
Authors:Grigg, J.C, Singh, R, Eltis, L.D, Murphy, M.E.P.
Deposit date:2012-10-22
Release date:2013-01-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Improved Manganese-Oxidizing Activity of DypB, a Peroxidase from a Lignolytic Bacterium.
Acs Chem.Biol., 8, 2013
3EIX
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BU of 3eix by Molmil
Crystal structure of selenomethionine labelled Staphylococcus aureus lipoprotein, HtsA
Descriptor: CHLORIDE ION, HtsA protein
Authors:Grigg, J.C, Murphy, M.E.P.
Deposit date:2008-09-17
Release date:2009-05-26
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Characterization of staphyloferrin A biosynthetic and transport mutants in Staphylococcus aureus.
Mol.Microbiol., 72, 2009

 

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