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3J9S
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BU of 3j9s by Molmil
Single particle cryo-EM structure of rotavirus VP6 at 2.6 Angstrom resolution
Descriptor: CALCIUM ION, CHLORIDE ION, Intermediate capsid protein VP6, ...
Authors:Grant, T, Grigorieff, N.
Deposit date:2015-02-19
Release date:2015-03-11
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Measuring the optimal exposure for single particle cryo-EM using a 2.6 angstrom reconstruction of rotavirus VP6.
Elife, 4, 2015
2VY9
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BU of 2vy9 by Molmil
Molecular architecture of the stressosome, a signal integration and transduction hub
Descriptor: ANTI-SIGMA-FACTOR ANTAGONIST
Authors:Marles-Wright, J, Grant, T, Delumeau, O, van Duinen, G, Firbank, S.J, Lewis, P.J, Murray, J.W, Newman, J.A, Quin, M.B, Race, P.R, Rohou, A, Tichelaar, W, van Heel, M, Lewis, R.J.
Deposit date:2008-07-21
Release date:2008-10-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Molecular Architecture of the "Stressosome," a Signal Integration and Transduction Hub
Science, 322, 2008
8FMA
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BU of 8fma by Molmil
Nodavirus RNA replication proto-crown, detergent-solubliized C11 multimer
Descriptor: RNA-directed RNA polymerase
Authors:Zhan, H, Unchwaniwala, N, Rebolledo Viveros, A, Pennington, J, Horswill, M, Broadberry, R, Myers, J, den Boon, J, Grant, T, Ahlquist, P.
Deposit date:2022-12-22
Release date:2023-02-01
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Nodavirus RNA replication crown architecture reveals proto-crown precursor and viral protein A conformational switching.
Proc.Natl.Acad.Sci.USA, 120, 2023
8FM9
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BU of 8fm9 by Molmil
Nodavirus RNA replication proto-crown, detergent-solubliized C12 multimer
Descriptor: RNA-directed RNA polymerase
Authors:Zhan, H, Unchwaniwala, N, Rebolledo Viveros, A, Pennington, J, Horswill, M, Broadberry, R, Myers, J, den Boon, J, Grant, T, Ahlquist, P.
Deposit date:2022-12-22
Release date:2023-02-01
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Nodavirus RNA replication crown architecture reveals proto-crown precursor and viral protein A conformational switching.
Proc.Natl.Acad.Sci.USA, 120, 2023
8FMB
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BU of 8fmb by Molmil
Nodavirus RNA replication protein A polymerase domain, local refinement
Descriptor: RNA-directed RNA polymerase
Authors:Zhan, H, Unchwaniwala, N, Rebolledo Viveros, A, Pennington, J, Horswill, M, Broadberry, R, Myers, J, den Boon, J, Grant, T, Ahlquist, P.
Deposit date:2022-12-22
Release date:2023-02-01
Method:ELECTRON MICROSCOPY (6.3 Å)
Cite:Nodavirus RNA replication crown architecture reveals proto-crown precursor and viral protein A conformational switching.
Proc.Natl.Acad.Sci.USA, 120, 2023
8DB3
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BU of 8db3 by Molmil
Crystal structure of KaiC with truncated C-terminal coiled-coil domain
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Circadian clock protein KaiC
Authors:Padua, R.A.P, Grant, T, Pitsawong, W, Hoemberger, M.S, Otten, R, Bradshaw, N, Grigorieff, N, Kern, D.
Deposit date:2022-06-14
Release date:2023-03-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:From primordial clocks to circadian oscillators.
Nature, 616, 2023
8DBA
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BU of 8dba by Molmil
Crystal structure of dodecameric KaiC
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Circadian clock protein KaiC, MAGNESIUM ION
Authors:Padua, R.A.P, Grant, T, Pitsawong, W, Hoemberger, M.S, Otten, R, Bradshaw, N, Grigorieff, N, Kern, D.
Deposit date:2022-06-14
Release date:2023-03-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:From primordial clocks to circadian oscillators.
Nature, 616, 2023
8FAK
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BU of 8fak by Molmil
DNA replication fork binding triggers structural changes in the PriA DNA helicase that regulate the PriA-PriB replication restart pathway in E. coli
Descriptor: DNA (5'-D(P*CP*AP*GP*AP*CP*TP*CP*AP*TP*TP*TP*AP*GP*CP*CP*CP*TP*TP*AP*TP*CP*CP*G)-3'), DNA (5'-D(P*CP*GP*GP*AP*TP*AP*AP*GP*GP*GP*CP*TP*GP*AP*GP*CP*AP*CP*GP*CP*CP*GP*A)-3'), DNA (5'-D(P*TP*CP*GP*GP*CP*GP*TP*GP*CP*TP*C)-3'), ...
Authors:Duckworth, A.T, Ducos, P.L, McMillan, S.D, Satyshur, K.A, Blumenthal, K.H, Deorio, H.R, Larson, J.A, Sandler, S.J, Grant, T, Keck, J.L.
Deposit date:2022-11-28
Release date:2023-05-10
Last modified:2023-05-24
Method:ELECTRON MICROSCOPY (3.22 Å)
Cite:Replication fork binding triggers structural changes in the PriA helicase that govern DNA replication restart in E. coli.
Nat Commun, 14, 2023
8FWJ
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BU of 8fwj by Molmil
Structure of dodecameric KaiC-RS-S413E/S414E complexed with KaiB-RS solved by cryo-EM
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Circadian clock protein KaiB, ...
Authors:Padua, R.A.P, Grant, T, Pitsawong, W, Hoemberger, M.S, Otten, R, Bradshaw, N, Grigorieff, N, Kern, D.
Deposit date:2023-01-22
Release date:2023-03-22
Last modified:2023-04-19
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:From primordial clocks to circadian oscillators.
Nature, 616, 2023
8FWI
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BU of 8fwi by Molmil
Structure of dodecameric KaiC-RS-S413E/S414E solved by cryo-EM
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Circadian clock protein KaiC, ...
Authors:Padua, R.A.P, Grant, T, Pitsawong, W, Hoemberger, M.S, Otten, R, Bradshaw, N, Grigorieff, N, Kern, D.
Deposit date:2023-01-22
Release date:2023-03-22
Last modified:2023-04-19
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:From primordial clocks to circadian oscillators.
Nature, 616, 2023
6OJ6
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BU of 6oj6 by Molmil
In situ structure of rotavirus VP1 RNA-dependent RNA polymerase (DLP_RNA)
Descriptor: Inner capsid protein VP2, RNA-directed RNA polymerase, Template, ...
Authors:Jenni, S, Salgado, E.N, Herrmann, T, Li, Z, Grant, T, Grigorieff, N, Trapani, S, Estrozi, L.F, Harrison, S.C.
Deposit date:2019-04-10
Release date:2019-04-24
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:In situ Structure of Rotavirus VP1 RNA-Dependent RNA Polymerase.
J.Mol.Biol., 431, 2019
6CNA
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BU of 6cna by Molmil
GluN1-GluN2B NMDA receptors with exon 5
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Glutamate receptor ionotropic, ...
Authors:Furukawa, H, Grant, T, Grigorieff, N.
Deposit date:2018-03-07
Release date:2018-10-03
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:Structural Mechanism of Functional Modulation by Gene Splicing in NMDA Receptors.
Neuron, 98, 2018
5A22
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BU of 5a22 by Molmil
Structure of the L protein of vesicular stomatitis virus from electron cryomicroscopy
Descriptor: VESICULAR STOMATITIS VIRUS L POLYMERASE, ZINC ION
Authors:Liang, B, Li, Z, Jenni, S, Rameh, A.A, Morin, B.M, Grant, T, Grigorieff, N, Harrison, S.C, Whelan, S.P.J.
Deposit date:2015-05-06
Release date:2015-08-19
Last modified:2019-04-24
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure of the L Protein of Vesicular Stomatitis Virus from Electron Cryomicroscopy.
Cell(Cambridge,Mass.), 162, 2015
6OJ3
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BU of 6oj3 by Molmil
In situ structure of rotavirus VP1 RNA-dependent RNA polymerase (TLP)
Descriptor: Inner capsid protein VP2, RNA-directed RNA polymerase
Authors:Jenni, S, Salgado, E.N, Herrmann, T, Li, Z, Grant, T, Grigorieff, N, Trapani, S, Estrozi, L.F, Harrison, S.C.
Deposit date:2019-04-10
Release date:2019-04-24
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:In situ Structure of Rotavirus VP1 RNA-Dependent RNA Polymerase.
J.Mol.Biol., 431, 2019
6OJ5
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BU of 6oj5 by Molmil
In situ structure of rotavirus VP1 RNA-dependent RNA polymerase (TLP_RNA)
Descriptor: Inner capsid protein VP2, RNA-directed RNA polymerase
Authors:Jenni, S, Salgado, E.N, Herrmann, T, Li, Z, Grant, T, Grigorieff, N, Trapani, S, Estrozi, L.F, Harrison, S.C.
Deposit date:2019-04-10
Release date:2019-04-24
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (5.2 Å)
Cite:In situ Structure of Rotavirus VP1 RNA-Dependent RNA Polymerase.
J.Mol.Biol., 431, 2019
6OJ4
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BU of 6oj4 by Molmil
In situ structure of rotavirus VP1 RNA-dependent RNA polymerase (DLP)
Descriptor: Inner capsid protein VP2, RNA-directed RNA polymerase
Authors:Jenni, S, Salgado, E.N, Herrmann, T, Li, Z, Grant, T, Grigorieff, N, Trapani, S, Estrozi, L.F, Harrison, S.C.
Deposit date:2019-04-10
Release date:2019-04-24
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:In situ Structure of Rotavirus VP1 RNA-Dependent RNA Polymerase.
J.Mol.Biol., 431, 2019
6OTF
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BU of 6otf by Molmil
Symmetric reconstruction of human norovirus GII.2 Snow Mountain Virus Strain VLP in T=3 symmetry
Descriptor: Viral protein 1, ZINC ION
Authors:Jung, J, Grant, T, Thomas, D.R, Diehnelt, C.W, Grigorieff, N, Joshua-Tor, L.
Deposit date:2019-05-03
Release date:2019-06-26
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:High-resolution cryo-EM structures of outbreak strain human norovirus shells reveal size variations.
Proc.Natl.Acad.Sci.USA, 116, 2019
5B3J
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BU of 5b3j by Molmil
Activation of NMDA receptors and the mechanism of inhibition by ifenprodil
Descriptor: Fab, heavy chain, light chain, ...
Authors:Tajima, N, Karakas, E, Grant, T, Simorowski, N, Diaz-Avalos, R, Grigorieff, N, Furukawa, H.
Deposit date:2016-03-01
Release date:2016-05-11
Last modified:2022-03-23
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Activation of NMDA receptors and the mechanism of inhibition by ifenprodil
Nature, 534, 2016
5JUO
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BU of 5juo by Molmil
Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure I (fully rotated 40S subunit)
Descriptor: 18S ribosomal RNA, 25S ribosomal RNA, 5.8S ribosomal RNA, ...
Authors:Abeyrathne, P, Koh, C.S, Grant, T, Grigorieff, N, Korostelev, A.A.
Deposit date:2016-05-10
Release date:2016-10-05
Last modified:2019-11-27
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Ensemble cryo-EM uncovers inchworm-like translocation of a viral IRES through the ribosome.
Elife, 5, 2016
5FXJ
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BU of 5fxj by Molmil
GluN1b-GluN2B NMDA receptor structure-Class X
Descriptor: GLUTAMATE RECEPTOR IONOTROPIC, NMDA 1, NMDA 2B
Authors:Tajima, N, Karakas, E, Grant, T, Simorowski, N, Diaz-Avalos, R, Grigorieff, N, Furukawa H, H.
Deposit date:2016-03-02
Release date:2016-05-25
Last modified:2016-06-15
Method:ELECTRON MICROSCOPY (6.5 Å)
Cite:Activation of Nmda Receptors and the Mechanism of Inhibition by Ifenprodil.
Nature, 534, 2016
5FXI
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BU of 5fxi by Molmil
GluN1b-GluN2B NMDA receptor structure in non-active-2 conformation
Descriptor: N-METHYL-D-ASPARTATE RECEPTOR GLUN1, N-METHYL-D-ASPARTATE RECEPTOR GLUN2B
Authors:Tajima, N, Karakas, E, Grant, T, Simorowski, N, Diaz-Avalos, R, Grigorieff, N, Furukawa, H.
Deposit date:2016-03-02
Release date:2016-05-11
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (6.4 Å)
Cite:Activation of Nmda Receptors and the Mechanism of Inhibition by Ifenprodil.
Nature, 534, 2016
5FXK
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BU of 5fxk by Molmil
GluN1b-GluN2B NMDA receptor structure-Class Y
Descriptor: N-METHYL-D-ASPARTATE RECEPTOR GLUN1, N-METHYL-D-ASPARTATE RECEPTOR GLUN2B
Authors:Tajima, N, Karakas, E, Grant, T, Simorowski, N, Diaz-Avalos, R, Grigorieff, N, Furukawa, H.
Deposit date:2016-03-02
Release date:2016-05-11
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (6.4 Å)
Cite:Activation of Nmda Receptors and the Mechanism of Inhibition by Ifenprodil.
Nature, 534, 2016
5FXG
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BU of 5fxg by Molmil
GLUN1B-GLUN2B NMDA RECEPTOR IN ACTIVE CONFORMATION
Descriptor: N-METHYL-D-ASPARTATE RECEPTOR GLUN1, N-METHYL-D-ASPARTATE RECEPTOR GLUN2B
Authors:Tajima, N, Karakas, E, Grant, T, Simorowski, N, Diaz-Avalos, R, Grigorieff, N, Furukawa, H.
Deposit date:2016-03-02
Release date:2016-05-11
Last modified:2019-10-23
Method:ELECTRON MICROSCOPY (6.8 Å)
Cite:Activation of Nmda Receptors and the Mechanism of Inhibition by Ifenprodil.
Nature, 534, 2016
5FXH
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BU of 5fxh by Molmil
GluN1b-GluN2B NMDA receptor in non-active-1 conformation
Descriptor: N-METHYL-D-ASPARTATE RECEPTOR GLUN1, N-METHYL-D-ASPARTATE RECEPTOR GLUN2B
Authors:Tajima, N, Karakas, E, Grant, T, Simorowski, N, Diaz-Avalos, R, Grigorieff, N, Furukawa, H.
Deposit date:2016-03-02
Release date:2016-05-11
Last modified:2019-10-23
Method:ELECTRON MICROSCOPY (6.1 Å)
Cite:Activation of Nmda Receptors and the Mechanism of Inhibition by Ifenprodil.
Nature, 534, 2016
6N1R
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BU of 6n1r by Molmil
Tetrahedral oligomeric complex of GyrA N-terminal fragment, solved by cryoEM in tetrahedral symmetry
Descriptor: DNA gyrase subunit A
Authors:Soczek, K.M, Grant, T, Rosenthal, P.B, Mondragon, A.
Deposit date:2018-11-10
Release date:2018-12-05
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4 Å)
Cite:CryoEM structures of open dimers of Gyrase A in complex with DNA illuminate mechanism of strand passage.
Elife, 7, 2018

 

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