Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8T5C
DownloadVisualize
BU of 8t5c by Molmil
Lassa GPC Trimer in complex with Fab 8.11G and nanobody D5
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 8.11G Heavy Chain, 8.11G Light Chain, ...
Authors:Gorman, J, Kwong, P.D.
Deposit date:2023-06-13
Release date:2024-01-03
Last modified:2024-01-24
Method:ELECTRON MICROSCOPY (4.7 Å)
Cite:Cleavage-intermediate Lassa virus trimer elicits neutralizing responses, identifies neutralizing nanobodies, and reveals an apex-situated site-of-vulnerability.
Nat Commun, 15, 2024
6TYB
DownloadVisualize
BU of 6tyb by Molmil
Isolation and Structure of an Antibody that Fully Neutralizes Isolate SIVmac239 Reveals Functional Similarity of SIV and HIV Glycan Shields
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp160, ...
Authors:Gorman, J, Kwong, P.D.
Deposit date:2019-08-08
Release date:2019-10-02
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.301 Å)
Cite:Isolation and Structure of an Antibody that Fully Neutralizes Isolate SIVmac239 Reveals Functional Similarity of SIV and HIV Glycan Shields.
Immunity, 51, 2019
8DUA
DownloadVisualize
BU of 8dua by Molmil
SIV E660.CR54 SOS-2P Env Trimer with ITS92.02
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp120, Envelope glycoprotein gp41, ...
Authors:Gorman, J, Kwong, P.D.
Deposit date:2022-07-27
Release date:2022-10-26
Last modified:2022-11-30
Method:ELECTRON MICROSCOPY (4.32 Å)
Cite:Cryo-EM structures of prefusion SIV envelope trimer.
Nat.Struct.Mol.Biol., 29, 2022
8DVD
DownloadVisualize
BU of 8dvd by Molmil
Cryo-EM structure of SIVmac239 SOS-2P Env trimer in complex with human bNAb PGT145
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp160, ...
Authors:Gorman, J, Kwong, P.D.
Deposit date:2022-07-28
Release date:2022-11-16
Last modified:2022-11-30
Method:ELECTRON MICROSCOPY (4.12 Å)
Cite:Cryo-EM structures of prefusion SIV envelope trimer.
Nat.Struct.Mol.Biol., 29, 2022
6VRW
DownloadVisualize
BU of 6vrw by Molmil
Cryo-EM structure of stabilized HIV-1 Env trimer CAP256.wk34.c80 SOSIP.RnS2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp120, ...
Authors:Gorman, J, Kwong, P.D.
Deposit date:2020-02-10
Release date:2020-03-11
Last modified:2021-10-06
Method:ELECTRON MICROSCOPY (3.71 Å)
Cite:Structure of Super-Potent Antibody CAP256-VRC26.25 in Complex with HIV-1 Envelope Reveals a Combined Mode of Trimer-Apex Recognition.
Cell Rep, 31, 2020
7UR6
DownloadVisualize
BU of 7ur6 by Molmil
Cryo-EM structure of SHIV-elicited, FP-directed Rhesus Fab RM6561.DH1021.14 in complex with stabilized HIV-1 Env Ce1176 DS-SOSIP.664
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy Chain, ...
Authors:Gorman, J, Kwong, P.D.
Deposit date:2022-04-21
Release date:2023-04-26
Method:ELECTRON MICROSCOPY (3.46 Å)
Cite:Cryo-EM structure of SHIV-elicited, FP-directed Rhesus Fab RM6561.DH1021.14 in complex with stabilized HIV-1 Env Ce1176 DS-SOSIP.664
To Be Published
5ESZ
DownloadVisualize
BU of 5esz by Molmil
Crystal Structure of Broadly Neutralizing Antibody CH04, Isolated from Donor CH0219, in Complex with Scaffolded Trimeric HIV-1 Env V1V2 Domain from the Clade AE Strain A244
Descriptor: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase,Envelope glycoprotein gp160, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CH04 Heavy Chain, ...
Authors:Gorman, J, Yang, M, Kwong, P.D.
Deposit date:2015-11-17
Release date:2015-12-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (4.191 Å)
Cite:Structures of HIV-1 Env V1V2 with broadly neutralizing antibodies reveal commonalities that enable vaccine design.
Nat. Struct. Mol. Biol., 23, 2016
5ESV
DownloadVisualize
BU of 5esv by Molmil
Crystal Structure of Broadly Neutralizing Antibody CH03, Isolated from Donor CH0219, in Complex with Scaffolded Trimeric HIV-1 Env V1V2 Domain from the Clade C Superinfecting Strain of Donor CAP256.
Descriptor: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase,Envelope glycoprotein gp160, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Gorman, J, Yang, M, Kwong, P.D.
Deposit date:2015-11-17
Release date:2015-12-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.105 Å)
Cite:Structures of HIV-1 Env V1V2 with broadly neutralizing antibodies reveal commonalities that enable vaccine design.
Nat.Struct.Mol.Biol., 23, 2016
2F02
DownloadVisualize
BU of 2f02 by Molmil
Crystal Structure of LacC from Enterococcus Faecalis in complex with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, tagatose-6-phosphate kinase
Authors:Gorman, J, Shapiro, L, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2005-11-10
Release date:2005-11-22
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of LacC from Enterococcus Faecalis in complex with ATP
To be Published
1YRH
DownloadVisualize
BU of 1yrh by Molmil
Crystal Structure Of Trp Repressor Binding Protein Wrba in complex with FMN
Descriptor: FLAVIN MONONUCLEOTIDE, trp repressor binding protein WrbA
Authors:Gorman, J, Shapiro, L, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2005-02-03
Release date:2005-02-15
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (3.11 Å)
Cite:Crystal structures of the tryptophan repressor binding protein WrbA and complexes with flavin mononucleotide.
Protein Sci., 14, 2005
1ZWL
DownloadVisualize
BU of 1zwl by Molmil
Structure of WrbA from Pseudomonas aeruginosa in complex with FMN
Descriptor: FLAVIN MONONUCLEOTIDE, Trp repressor binding protein WrbA
Authors:Gorman, J, Shapiro, L, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2005-06-03
Release date:2005-06-14
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structures of the tryptophan repressor binding protein WrbA and complexes with flavin mononucleotide.
Protein Sci., 14, 2005
1ZWK
DownloadVisualize
BU of 1zwk by Molmil
Structure of WrbA from Pseudomonas aeruginosa
Descriptor: PHOSPHATE ION, Trp repressor binding protein WrbA
Authors:Gorman, J, Shapiro, L, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2005-06-03
Release date:2005-06-14
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structures of the tryptophan repressor binding protein WrbA and complexes with flavin mononucleotide.
Protein Sci., 14, 2005
2A1F
DownloadVisualize
BU of 2a1f by Molmil
Crystal Structure of Uridylate kinase
Descriptor: Uridylate kinase
Authors:Gorman, J, Shapiro, L, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2005-06-20
Release date:2005-06-28
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of Uridylate kinase
To be Published
2AKO
DownloadVisualize
BU of 2ako by Molmil
Crystal structure of Glutamate 5-kinase from Campylobacter jejuni
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Glutamate 5-kinase
Authors:Gorman, J, Shapiro, L, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2005-08-03
Release date:2005-08-09
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of Glutamate 5-kinase from Campylobacter jejuni
To be Published
2AWD
DownloadVisualize
BU of 2awd by Molmil
Crystal structure of LacC from Enterococcus faecalis
Descriptor: BROMIDE ION, tagatose-6-phosphate kinase
Authors:Gorman, J, Shapiro, L, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2005-08-31
Release date:2005-09-13
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of LacC from Enterococcus faecalis
To be Published
1R3D
DownloadVisualize
BU of 1r3d by Molmil
Crystal structure of protein VC1974 from Vibrio cholerae, Pfam abhydrolase
Descriptor: conserved hypothetical protein VC1974
Authors:Gorman, J, Shapiro, L, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2003-10-01
Release date:2004-11-30
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Genomics target NYSGRC-T920 related to A/B hydrolase fold.
To be Published
1S80
DownloadVisualize
BU of 1s80 by Molmil
Structure of Serine Acetyltransferase from Haemophilis influenzae Rd
Descriptor: Serine acetyltransferase
Authors:Gorman, J, Gogos, A, Shapiro, L, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2004-01-30
Release date:2004-08-31
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of serine acetyltransferase from Haemophilus influenzae Rd.
Acta Crystallogr.,Sect.D, 60, 2004
1TVL
DownloadVisualize
BU of 1tvl by Molmil
Structure of YTNJ from Bacillus subtilis
Descriptor: protein YTNJ
Authors:Gorman, J, Shapiro, L, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2004-06-29
Release date:2004-07-13
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.104 Å)
Cite:Structure of YTNJ from Bacillus subtilis
To be Published
1TO3
DownloadVisualize
BU of 1to3 by Molmil
Structure of yiht from Salmonella typhimurium
Descriptor: BROMIDE ION, PHOSPHATE ION, Putative aldolase yihT
Authors:Gorman, J, Shapiro, L, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2004-06-11
Release date:2004-06-22
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of yiht from Salmonella typhimurium
To be Published
1TR9
DownloadVisualize
BU of 1tr9 by Molmil
Structure of beta-hexosaminidase from Vibrio cholerae
Descriptor: Beta-hexosaminidase
Authors:Gorman, J, Shapiro, L, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2004-06-21
Release date:2004-12-14
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of beta-hexosaminidase from Vibrio cholerae
To be Published
1YDG
DownloadVisualize
BU of 1ydg by Molmil
Crystal Structure of Trp repressor binding protein WrbA
Descriptor: SULFATE ION, trp repressor binding protein WrbA
Authors:Gorman, J, Shapiro, L, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2004-12-23
Release date:2005-01-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of the tryptophan repressor binding protein WrbA and complexes with flavin mononucleotide.
Protein Sci., 14, 2005
1Y65
DownloadVisualize
BU of 1y65 by Molmil
Crystal structure of beta-hexosaminidase from Vibrio cholerae in complex with N-acetyl-D-glucosamine to a resolution of 1.85
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-hexosaminidase
Authors:Gorman, J, Shapiro, L, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2004-12-03
Release date:2004-12-14
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of beta-hexosaminidase from Vibrio cholerae in complex with N-acetyl-D-glucosamine to a resolution of 1.85
To be Published
6VTT
DownloadVisualize
BU of 6vtt by Molmil
Cryo-EM Structure of CAP256-VRC26.25 Fab bound to HIV-1 Env trimer CAP256.wk34.c80 SOSIP.RnS2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp120, ...
Authors:Gorman, J, Kwong, P.D.
Deposit date:2020-02-13
Release date:2020-04-08
Last modified:2021-10-06
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structure of Super-Potent Antibody CAP256-VRC26.25 in Complex with HIV-1 Envelope Reveals a Combined Mode of Trimer-Apex Recognition.
Cell Rep, 31, 2020
6VRY
DownloadVisualize
BU of 6vry by Molmil
Structure of NCI09 fab in complex with SIV V2 peptide
Descriptor: NCI09 heavy chain, NCI09 light chain, SIV V2 peptide, ...
Authors:Gorman, J, Ahmadi, M, Kwong, P.D.
Deposit date:2020-02-10
Release date:2020-12-30
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:HIV vaccine candidate with V1 deletion reveals virus vulnerability to V2 antibodies
Iscience, 2020
6OT1
DownloadVisualize
BU of 6ot1 by Molmil
Cryo-EM structure of vaccine-elicited antibody 0PV-b.01 in complex with HIV-1 Env BG505 DS-SOSIP and antibodies VRC03 and PGT122
Descriptor: 0PV-b.01 heavy, 0PV-b.01 light, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Gorman, J, Kwong, P.D.
Deposit date:2019-05-02
Release date:2019-08-07
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Antibody Lineages with Vaccine-Induced Antigen-Binding Hotspots Develop Broad HIV Neutralization.
Cell, 178, 2019

217705

PDB entries from 2024-03-27

PDB statisticsPDBj update infoContact PDBjnumon