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2NUB
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BU of 2nub by Molmil
Structure of Aquifex aeolicus Argonuate
Descriptor: Argonaute
Authors:Rashid, U.J, Paterok, D, Koglin, A, Gohlke, H, Piehler, J, Chen, J.C.-H.
Deposit date:2006-11-09
Release date:2007-02-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structure of Aquifex aeolicus argonaute highlights conformational flexibility of the PAZ domain as a potential regulator of RNA-induced silencing complex function.
J.Biol.Chem., 282, 2007
5OVM
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BU of 5ovm by Molmil
Solution structure of lipase binding domain LID1 of foldase from Pseudomonas aeruginosa
Descriptor: Lipase chaperone
Authors:Viegas, A, Jaeger, K.-E, Etzkorn, M, Gohlke, H, Verma, N, Dollinger, P, Kovacic, F.
Deposit date:2017-08-29
Release date:2018-12-12
Last modified:2020-03-18
Method:SOLUTION NMR
Cite:Structural and dynamic insights revealing how lipase binding domain MD1 of Pseudomonas aeruginosa foldase affects lipase activation.
Sci Rep, 10, 2020
7PZE
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BU of 7pze by Molmil
MademoiseLLE domain 2 of Rrm4 from Ustilago maydis
Descriptor: Chromosome 8, whole genome shotgun sequence
Authors:Devans, S, Schott-Verdugo, s, Muentjes, K, Olgeiser, L, Reiners, J, Schmitt, L, Hoeppner, A, Smits, S.H, Gohlke, H, Feldbruegge, M.
Deposit date:2021-10-12
Release date:2022-06-15
Last modified:2022-12-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A MademoiseLLE domain binding platform links the key RNA transporter to endosomes.
Plos Genet., 18, 2022
6GSF
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BU of 6gsf by Molmil
Solution structure of lipase binding domain LID1 of foldase from Pseudomonas aeruginosa
Descriptor: Lipase chaperone
Authors:Viegas, A, Jaeger, K.-E, Etzkorn, M, Gohlke, H, Verma, N, Dollinger, P, Kovacic, F.
Deposit date:2018-06-14
Release date:2018-12-26
Last modified:2020-03-18
Method:SOLUTION NMR
Cite:Structural and dynamic insights revealing how lipase binding domain MD1 of Pseudomonas aeruginosa foldase affects lipase activation.
Sci Rep, 10, 2020
8B4U
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BU of 8b4u by Molmil
The crystal structure of PET46, a PETase enzyme from Candidatus bathyarchaeota
Descriptor: 1,2-ETHANEDIOL, Alpha/beta hydrolase, CHLORIDE ION, ...
Authors:Costanzi, E, Applegate, V, Schumacher, J, Smits, S.H.J.
Deposit date:2022-09-21
Release date:2023-08-23
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:An archaeal lid-containing feruloyl esterase degrades polyethylene terephthalate.
Commun Chem, 6, 2023
7PDU
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BU of 7pdu by Molmil
Pre-catalytic complex of 10-23 DNAzyme with RNA target
Descriptor: 10-23 DNAzyme (33-MER), RNA target (19-MER)
Authors:Etzkorn, M, Borggrafe, J, Viegas, A.
Deposit date:2021-08-07
Release date:2021-12-15
Last modified:2022-01-26
Method:SOLUTION NMR
Cite:Time-resolved structural analysis of an RNA-cleaving DNA catalyst.
Nature, 601, 2022
5OG7
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BU of 5og7 by Molmil
Endothiapepsin in complex with hydrazide fragment
Descriptor: 3-chloranyl-~{N}'-(4,5-dihydro-1~{H}-imidazol-3-ium-2-yl)propanehydrazide, DIMETHYL SULFOXIDE, Endothiapepsin
Authors:Metz, A, Klauser, P.C, Heine, A, Klebe, G.
Deposit date:2017-07-12
Release date:2018-08-08
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.823 Å)
Cite:Endothiapepsin in complex with hydrazide fragment
To Be Published
6R7L
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BU of 6r7l by Molmil
Ribosome-bound SecYEG translocon in a nanodisc
Descriptor: Protein translocase subunit SecY, SecE,Protein translocase subunit SecE,Protein translocase subunit SecE,Protein translocase subunit SecE, SecG
Authors:Kater, L, Beckmann, R, Kedrov, A.
Deposit date:2019-03-29
Release date:2019-08-07
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (6 Å)
Cite:Partially inserted nascent chain unzips the lateral gate of the Sec translocon.
Embo Rep., 20, 2019
6SCD
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BU of 6scd by Molmil
Polyester hydrolase PE-H Y250S mutant of Pseudomonas aestusnigri
Descriptor: ACETATE ION, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Bollinger, A, Thies, S, Kobus, S, Hoeppner, A, Smits, S.H.J, Jaeger, K.-E.
Deposit date:2019-07-24
Release date:2020-02-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:A Novel Polyester Hydrolase From the Marine BacteriumPseudomonas aestusnigri -Structural and Functional Insights.
Front Microbiol, 11, 2020
6SBN
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BU of 6sbn by Molmil
Polyester hydrolase PE-H of Pseudomonas aestusnigri
Descriptor: ACETATE ION, SODIUM ION, polyester hydrolase
Authors:Bollinger, A, Thies, S, Kobus, S, Hoeppner, A, Smits, S.H.J, Jaeger, K.-E.
Deposit date:2019-07-22
Release date:2020-02-26
Last modified:2020-03-11
Method:X-RAY DIFFRACTION (1.09 Å)
Cite:A Novel Polyester Hydrolase From the Marine BacteriumPseudomonas aestusnigri -Structural and Functional Insights.
Front Microbiol, 11, 2020
7P04
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BU of 7p04 by Molmil
Cryo-EM structure of Pdr5 from Saccharomyces cerevisiae in inward-facing conformation with ADP/ATP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Pleiotropic ABC efflux transporter of multiple drugs
Authors:Szewczak-Harris, A, Wagner, M, Du, D, Schmitt, L, Luisi, B.F.
Deposit date:2021-06-29
Release date:2021-11-10
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:Structure and efflux mechanism of the yeast pleiotropic drug resistance transporter Pdr5.
Nat Commun, 12, 2021
7P06
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BU of 7p06 by Molmil
Cryo-EM structure of Pdr5 from Saccharomyces cerevisiae in outward-facing conformation with ADP-orthovanadate/ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ADP ORTHOVANADATE, MAGNESIUM ION, ...
Authors:Szewczak-Harris, A, Wagner, M, Du, D, Schmitt, L, Luisi, B.F.
Deposit date:2021-06-29
Release date:2021-11-10
Method:ELECTRON MICROSCOPY (3.77 Å)
Cite:Structure and efflux mechanism of the yeast pleiotropic drug resistance transporter Pdr5.
Nat Commun, 12, 2021
7P03
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BU of 7p03 by Molmil
Cryo-EM structure of Pdr5 from Saccharomyces cerevisiae in inward-facing conformation without nucleotides
Descriptor: Pleiotropic ABC efflux transporter of multiple drugs
Authors:Szewczak-Harris, A, Wagner, M, Du, D, Schmitt, L, Luisi, B.F.
Deposit date:2021-06-29
Release date:2021-11-10
Method:ELECTRON MICROSCOPY (3.45 Å)
Cite:Structure and efflux mechanism of the yeast pleiotropic drug resistance transporter Pdr5.
Nat Commun, 12, 2021
7P05
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BU of 7p05 by Molmil
Cryo-EM structure of Pdr5 from Saccharomyces cerevisiae in inward-facing conformation with ADP/ATP and rhodamine 6G
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Pleiotropic ABC efflux transporter of multiple drugs, ...
Authors:Szewczak-Harris, A, Wagner, M, Du, D, Schmitt, L, Luisi, B.F.
Deposit date:2021-06-29
Release date:2021-11-10
Method:ELECTRON MICROSCOPY (3.13 Å)
Cite:Structure and efflux mechanism of the yeast pleiotropic drug resistance transporter Pdr5.
Nat Commun, 12, 2021
8OOG
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BU of 8oog by Molmil
Crystal structure of human MAT2a with S-Adenosylmethionine and a fragment bound in a novel pocket
Descriptor: 6-oxidanyl-1,3-benzoxathiol-2-one, DIMETHYL SULFOXIDE, S-ADENOSYLMETHIONINE, ...
Authors:Schimpl, M.
Deposit date:2023-04-05
Release date:2023-07-12
Method:X-RAY DIFFRACTION (1.384 Å)
Cite:Combining structural and coevolution information to unveil allosteric sites.
Chem Sci, 14, 2023
3MAM
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BU of 3mam by Molmil
A molecular switch changes the low to the high affinity state in the substrate binding protein AfProX
Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Osmoprotection protein (ProX), ...
Authors:Tschapek, B, Pittelkow, M, Bremer, E, Schmitt, L, Smits, S.H.
Deposit date:2010-03-24
Release date:2011-04-06
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Arg149 Is Involved in Switching the Low Affinity, Open State of the Binding Protein AfProX into Its High Affinity, Closed State.
J.Mol.Biol., 411, 2011
5JVJ
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BU of 5jvj by Molmil
C4-type pyruvate phosphate dikinase: different conformational states of the nucleotide binding domain in the dimer
Descriptor: MAGNESIUM ION, PHOSPHOENOLPYRUVATE, Pyruvate, ...
Authors:Minges, A, Hoeppner, A, Groth, G.
Deposit date:2016-05-11
Release date:2017-04-05
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.898 Å)
Cite:Structural intermediates and directionality of the swiveling motion of Pyruvate Phosphate Dikinase.
Sci Rep, 7, 2017
5JVN
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BU of 5jvn by Molmil
C3-type pyruvate phosphate dikinase: intermediate state of the central domain in the swiveling mechanism
Descriptor: 2'-Bromo-2'-deoxyadenosine 5'-[beta,gamma-imide]triphosphoric acid, MAGNESIUM ION, PHOSPHOENOLPYRUVATE, ...
Authors:Minges, A, Hoeppner, A, Groth, G.
Deposit date:2016-05-11
Release date:2017-04-05
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural intermediates and directionality of the swiveling motion of Pyruvate Phosphate Dikinase.
Sci Rep, 7, 2017
7ZGT
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BU of 7zgt by Molmil
C-Methyltransferase PsmD from Streptomyces griseofuscus (apo form)
Descriptor: FORMIC ACID, Methyltransferase, PHOSPHATE ION, ...
Authors:Weiergraeber, O.H, Amariei, D.A, Pozhydaieva, N, Pietruszka, J.
Deposit date:2022-04-04
Release date:2022-12-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Enzymatic C3-Methylation of Indoles Using Methyltransferase PsmD-Crystal Structure, Catalytic Mechanism, and Preparative Applications
Acs Catalysis, 2022
7ZKH
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BU of 7zkh by Molmil
C-Methyltransferase PsmD from Streptomyces griseofuscus with bound cofactor (crystal form 1)
Descriptor: Methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE, TRIETHYLENE GLYCOL, ...
Authors:Weiergraeber, O.H, Amariei, D.A, Pozhydaieva, N, Pietruszka, J.
Deposit date:2022-04-13
Release date:2022-12-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Enzymatic C3-Methylation of Indoles Using Methyltransferase PsmD-Crystal Structure, Catalytic Mechanism, and Preparative Applications
Acs Catalysis, 2022
7ZKG
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BU of 7zkg by Molmil
C-Methyltransferase PsmD from Streptomyces griseofuscus with bound cofactor (crystal form 2)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Methyltransferase, PHOSPHATE ION, ...
Authors:Weiergraeber, O.H, Amariei, D.A, Pozhydaieva, N, Pietruszka, J.
Deposit date:2022-04-13
Release date:2022-12-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Enzymatic C3-Methylation of Indoles Using Methyltransferase PsmD-Crystal Structure, Catalytic Mechanism, and Preparative Applications
Acs Catalysis, 2022
5C2X
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BU of 5c2x by Molmil
Crystal structure of deoxyribose-phosphate aldolase from Colwellia psychrerythraea (tetragonal form)
Descriptor: CARBONATE ION, Deoxyribose-phosphate aldolase, SULFATE ION, ...
Authors:Dick, M, Weiergraeber, O.H, Pietruszka, J.
Deposit date:2015-06-16
Release date:2016-02-03
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Trading off stability against activity in extremophilic aldolases.
Sci Rep, 6, 2016
5C6M
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BU of 5c6m by Molmil
Crystal structure of deoxyribose-phosphate aldolase from Shewanella halifaxensis
Descriptor: CHLORIDE ION, Deoxyribose-phosphate aldolase, SODIUM ION
Authors:Weiergraeber, O.H, Dick, M, Bramski, J, Pietruszka, J.
Deposit date:2015-06-23
Release date:2016-02-03
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Trading off stability against activity in extremophilic aldolases.
Sci Rep, 6, 2016
5C5Y
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BU of 5c5y by Molmil
Crystal structure of deoxyribose-phosphate aldolase from Colwellia psychrerythraea (hexagonal form)
Descriptor: Deoxyribose-phosphate aldolase, GLYCEROL, UNKNOWN LIGAND
Authors:Weiergraeber, O.H, Dick, M, Pietruszka, J.
Deposit date:2015-06-22
Release date:2016-02-03
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Trading off stability against activity in extremophilic aldolases.
Sci Rep, 6, 2016
5DCL
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BU of 5dcl by Molmil
Structure of a lantibiotic response regulator: N terminal domain of the nisin resistance regulator NsrR
Descriptor: 1,2-ETHANEDIOL, PhoB family transcriptional regulator
Authors:Khosa, S, Kleinschrodt, D, Hoeppner, A, Smits, S.H.
Deposit date:2015-08-24
Release date:2016-03-16
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Structure of the Response Regulator NsrR from Streptococcus agalactiae, Which Is Involved in Lantibiotic Resistance.
Plos One, 11, 2016

 

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