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1HKQ
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BU of 1hkq by Molmil
PPS10 plasmid DNA replication initiator protein RepA. Replication inactive, dimeric N-terminal domain.
Descriptor: BENZOIC ACID, MERCURY (II) ION, PHOSPHATE ION, ...
Authors:Giraldo, R, Fernandez-Tornero, C, Evans, P.R, Diaz-Orejas, R, Romero, A.
Deposit date:2003-03-11
Release date:2003-05-29
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:A Conformational Switch between Transcriptional Repression and Replication Initiation in Repa Dimerization Domain
Nat.Struct.Biol., 10, 2003
4QR9
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BU of 4qr9 by Molmil
Crystal structure of two HMGB1 Box A domains cooperating to underwind and kink a DNA
Descriptor: DNA (5'-D(*AP*TP*AP*TP*CP*GP*AP*TP*AP*T)-3'), High mobility group protein B1, MAGNESIUM ION
Authors:Sanchez-Giraldo, R, Acosta-Reyes, F.J, Malarkey, C.S, Saperas, N, Churchill, M.E.A, Campos, J.L.
Deposit date:2014-06-30
Release date:2015-07-01
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Two high-mobility group box domains act together to underwind and kink DNA.
Acta Crystallogr.,Sect.D, 71, 2015
1M1F
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BU of 1m1f by Molmil
Kid toxin protein from E.coli plasmid R1
Descriptor: Kid toxin protein, PHOSPHATE ION
Authors:Hargreaves, D, Santos-Sierra, S, Giraldo, R, Sabariegos-Jareno, R, de la Cueva-Mendez, G, Boelens, R, Diaz-Orejas, R, Rafferty, J.B.
Deposit date:2002-06-19
Release date:2002-11-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural and Functional Analysis of the Kid toxin protein from E.coli plasmid R1
Structure, 10, 2002
1IGN
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BU of 1ign by Molmil
DNA-BINDING DOMAIN OF RAP1 IN COMPLEX WITH TELOMERIC DNA SITE
Descriptor: DNA (5'-D(*CP*CP*GP*CP*AP*CP*AP*CP*CP*CP*AP*CP*AP*CP*AP*CP*C P*AP*G)-3'), DNA (5'-D(*CP*CP*TP*GP*GP*TP*GP*TP*GP*TP*GP*GP*GP*TP*GP*TP*G P*CP*G)-3'), PROTEIN (RAP1)
Authors:Koenig, P, Giraldo, R, Chapman, L, Rhodes, D.
Deposit date:1996-02-29
Release date:1997-01-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The crystal structure of the DNA-binding domain of yeast RAP1 in complex with telomeric DNA.
Cell(Cambridge,Mass.), 85, 1996
4J2I
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BU of 4j2i by Molmil
Multiple crystal structures of an all-AT DNA dodecamer stabilized by weak interactions
Descriptor: 5'-D(*AP*AP*TP*AP*AP*AP*TP*TP*TP*AP*TP*T)-3'
Authors:Acosta-Reyes, F.J, Subirana, J.A, Pous, J, Sanchez, R, Condom, N, Baldini, R, Malinina, L, Campos, J.L.
Deposit date:2013-02-04
Release date:2014-02-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.98 Å)
Cite:Polymorphic crystal structures of an all-AT DNA dodecamer.
Biopolymers, 103, 2015
4HW1
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BU of 4hw1 by Molmil
Multiple Crystal structures of an all-AT DNA dodecamer stabilized by weak interactions.
Descriptor: DNA (5'-D(*AP*AP*TP*AP*AP*AP*TP*TP*TP*AP*TP*T)-3'), MAGNESIUM ION
Authors:Acosta-Reyes, F, Subirana, J.A, Pous, J, Condom, N, Malinina, L, Campos, J.L.
Deposit date:2012-11-07
Release date:2013-11-20
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Polymorphic crystal structures of an all-AT DNA dodecamer.
Biopolymers, 103, 2015
8AAN
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BU of 8aan by Molmil
The nucleoprotein complex of Rep protein with iteron containing dsDNA and DUE ssDNA.
Descriptor: DNA (5'-D(*AP*TP*TP*TP*TP*TP*AP*T)-3'), DNA (5'-D(*CP*CP*TP*GP*TP*GP*AP*CP*AP*AP*AP*TP*TP*GP*CP*CP*CP*TP*CP*AP*GP*T)-3'), DNA (5'-D(*CP*TP*GP*AP*GP*GP*GP*CP*AP*AP*TP*TP*TP*GP*TP*CP*AP*CP*AP*GP*GP*T)-3'), ...
Authors:Nowacka, M, Wegrzyn, K.
Deposit date:2022-07-01
Release date:2023-09-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Rep protein accommodates together dsDNA and ssDNA which enables a loop-back mechanism to plasmid DNA replication initiation.
Nucleic Acids Res., 51, 2023
8AC8
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BU of 8ac8 by Molmil
The nucleoprotein complex of Rep protein with DUE ssDNA
Descriptor: DNA (5'-D(*AP*TP*TP*TP*TP*TP*AP*TP*A)-3'), Replication initiation protein
Authors:Nowacka, M, Wegrzyn, K, Oliwa, M, Konieczny, I.
Deposit date:2022-07-05
Release date:2023-09-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Rep protein accommodates together dsDNA and ssDNA which enables a loop-back mechanism to plasmid DNA replication initiation.
Nucleic Acids Res., 51, 2023

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