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1YNR
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BU of 1ynr by Molmil
Crystal structure of the cytochrome c-552 from Hydrogenobacter thermophilus at 2.0 resolution
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Cytochrome c-552, HEME C, ...
Authors:Travaglini-Allocatelli, C, Gianni, S, Dubey, V.K, Borgia, A, Di Matteo, A, Bonivento, D, Cutruzzola, F, Bren, K.L, Brunori, M.
Deposit date:2005-01-25
Release date:2005-05-17
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:An Obligatory Intermediate in the Folding Pathway of Cytochrome c552 from Hydrogenobacter thermophilus
J.Biol.Chem., 280, 2005
4AMH
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BU of 4amh by Molmil
Influence of circular permutation on the folding pathway of a PDZ domain
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DISKS LARGE HOMOLOG 1, GLYCEROL
Authors:Hultqvist, G, Punekar, A.S, Chi, C.N, Selmer, M, Gianni, S, Jemth, P.
Deposit date:2012-03-10
Release date:2012-12-05
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Tolerance of Protein Folding to a Circular Permutation in a Pdz Domain
Plos One, 7, 2012
2WIO
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BU of 2wio by Molmil
Structure of the histidine tagged, open cytochrome P450 Eryk from S. erythraea
Descriptor: ERYTHROMYCIN B/D C-12 HYDROXYLASE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Savino, C, Montemiglio, L.C, Sciara, G, Miele, A.E, Kedrew, S.G, Gianni, S, Vallone, B.
Deposit date:2009-05-14
Release date:2009-07-21
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Investigating the Structural Plasticity of a Cytochrome P450: Three-Dimensional Structures of P450 Eryk and Binding to its Physiological Substrate.
J.Biol.Chem., 284, 2009
2XFH
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BU of 2xfh by Molmil
Structure of cytochrome P450 EryK cocrystallized with inhibitor clotrimazole.
Descriptor: 1-[(2-CHLOROPHENYL)(DIPHENYL)METHYL]-1H-IMIDAZOLE, DIMETHYL SULFOXIDE, ERYTHROMYCIN B/D C-12 HYDROXYLASE, ...
Authors:Savino, C, Montemiglio, L.C, Gianni, S, Vallone, B.
Deposit date:2010-05-24
Release date:2010-09-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Azole Drugs Trap Cytochrome P450 Eryk in Alternative Conformational States.
Biochemistry, 49, 2010
3RBF
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BU of 3rbf by Molmil
Crystal structure of Human aromatic L-amino acid decarboxylase (AADC) in the apo form
Descriptor: Aromatic-L-amino-acid decarboxylase, CHLORIDE ION, PYRIDOXAL-5'-PHOSPHATE
Authors:Giardina, G, Montioli, R, Gianni, S, Cellini, B, Paiardini, A, Borri Voltattorni, C, Cutruzzola, F.
Deposit date:2011-03-29
Release date:2011-10-19
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Open conformation of human DOPA decarboxylase reveals the mechanism of PLP addition to Group II decarboxylases.
Proc.Natl.Acad.Sci.USA, 108, 2011
3RBL
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BU of 3rbl by Molmil
Crystal structure of Human aromatic L-amino acid decarboxylase (AADC) in the apo form
Descriptor: CHLORIDE ION, aromatic L-amino acid decarboxylase
Authors:Giardina, G, Montioli, R, Gianni, S, Cellini, B, Paiardini, A, Borri Voltattorni, C, Cutruzzola, F.
Deposit date:2011-03-29
Release date:2011-10-19
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.24 Å)
Cite:Open conformation of human DOPA decarboxylase reveals the mechanism of PLP addition to Group II decarboxylases.
Proc.Natl.Acad.Sci.USA, 108, 2011
3RCH
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BU of 3rch by Molmil
Crystal structure of Human aromatic L-amino acid decarboxylase (AADC) in the open conformation with LLP and PLP bound to Chain-A and Chain-B respectively
Descriptor: PYRIDOXAL-5'-PHOSPHATE, aromatic L-amino acid decarboxylase
Authors:Giardina, G, Montioli, R, Gianni, S, Cellini, B, Paiardini, A, Borri Voltattorni, C, Cutruzzola, F.
Deposit date:2011-03-31
Release date:2011-10-19
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Open conformation of human DOPA decarboxylase reveals the mechanism of PLP addition to Group II decarboxylases.
Proc.Natl.Acad.Sci.USA, 108, 2011
2X7Z
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BU of 2x7z by Molmil
Crystal Structure of the SAP97 PDZ2 I342W C378A mutant protein domain
Descriptor: AMMONIUM ION, DISKS LARGE HOMOLOG 1, IMIDAZOLE
Authors:Haq, S.R, Jurgens, M.C, Chi, C.N, Elfstrom, L, Koh, C.S, Selmer, M, Gianni, S, Jemth, P.
Deposit date:2010-03-04
Release date:2010-03-31
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Plastic Energy Landscape of Protein Folding: A Triangular Folding Mechanism with an Equilibrium Intermediate for a Small Protein Domain.
J.Biol.Chem., 285, 2010
3KH7
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BU of 3kh7 by Molmil
Crystal structure of the periplasmic soluble domain of reduced CcmG from Pseudomonas aeruginosa
Descriptor: Thiol:disulfide interchange protein dsbE
Authors:Di Matteo, A, Calosci, N, Gianni, S, Jemth, P, Brunori, M, Travaglini Allocatelli, C.
Deposit date:2009-10-30
Release date:2010-04-07
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural and functional characterization of CcmG from Pseudomonas aeruginosa, a key component of the bacterial cytochrome c maturation apparatus.
Proteins, 78, 2010
3KH9
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BU of 3kh9 by Molmil
Crystal structure of the periplasmic soluble domain of oxidized CcmG from Pseudomonas aeruginosa
Descriptor: Thiol:disulfide interchange protein dsbE
Authors:Di Matteo, A, Calosci, N, Gianni, S, Jemth, P, Brunori, M, Travaglini Allocatelli, C.
Deposit date:2009-10-30
Release date:2010-04-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and functional characterization of CcmG from Pseudomonas aeruginosa, a key component of the bacterial cytochrome c maturation apparatus.
Proteins, 78, 2010
2HL7
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BU of 2hl7 by Molmil
Crystal structure of the periplasmic domain of CcmH from Pseudomonas aeruginosa
Descriptor: Cytochrome C-type biogenesis protein CcmH, TETRAETHYLENE GLYCOL
Authors:Di Matteo, A, Travaglini-Allocatelli, C, Gianni, S, Brunori, M.
Deposit date:2006-07-06
Release date:2007-07-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A strategic protein in cytochrome c maturation: three-dimensional structure of CcmH and binding to apocytochrome c
J.Biol.Chem., 282, 2007
1VJ6
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BU of 1vj6 by Molmil
PDZ2 from PTP-BL in complex with the C-terminal ligand from the APC protein
Descriptor: Adenomatous polyposis coli protein, protein-tyrosine-phosphatase (nonreceptor type 13)
Authors:Walma, T, Vuister, G.W.
Deposit date:2004-02-03
Release date:2005-11-01
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Demonstration of long-range interactions in a PDZ domain by NMR, kinetics, and protein engineering.
Structure, 14, 2006
2NTO
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BU of 2nto by Molmil
Structure of the Glutathione Transferase from Ochrobactrum anthropi in complex with glutathione
Descriptor: GLUTATHIONE, SULFATE ION, glutathione S-transferase
Authors:Federici, L, Bonivento, D, Di Matteo, A, Allocati, N.
Deposit date:2006-11-08
Release date:2007-09-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.095 Å)
Cite:Role of Ser11 in the stabilization of the structure of Ochrobactrum anthropi glutathione transferase
Biochem.J., 403, 2007
2JJP
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BU of 2jjp by Molmil
Structure of cytochrome P450 EryK in complex with inhibitor ketoconazole (KC)
Descriptor: 1-ACETYL-4-(4-{[(2S,4R)-2-(2,4-DICHLOROPHENYL)-2-(1H-IMIDAZOL-1-YLMETHYL)-1,3-DIOXOLAN-4-YL]METHOXY}PHENYL)PIPERAZINE, CYTOCHROME P450 113A1, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Savino, C, Sciara, G, Miele, A.E, Kendrew, S.G, Vallone, B.
Deposit date:2008-04-15
Release date:2009-07-14
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Azole Drugs Trap Cytochrome P450 Eryk in Alternative Conformational States.
Biochemistry, 49, 2010
2JJO
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BU of 2jjo by Molmil
Structure of cytochrome P450 EryK in complex with its natural substrate erD
Descriptor: CYTOCHROME P450 113A1, Erythromycin D, PROTOPORPHYRIN IX CONTAINING FE
Authors:Savino, C, Sciara, G, Miele, A.E, Kendrew, S.G, Vallone, B.
Deposit date:2008-04-15
Release date:2009-07-14
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Investigating the Structural Plasticity of a Cytochrome P450: Three-Dimensional Structures of P450 Eryk and Binding to its Physiological Substrate.
J.Biol.Chem., 284, 2009
2JJN
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BU of 2jjn by Molmil
Structure of closed cytochrome P450 EryK
Descriptor: CYTOCHROME P450 113A1, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Savino, C, Sciara, G, Miele, A.E, Kendrew, S.G, Vallone, B.
Deposit date:2008-04-15
Release date:2009-07-14
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Investigating the Structural Plasticity of a Cytochrome P450: Three-Dimensional Structures of P450 Eryk and Binding to its Physiological Substrate.
J.Biol.Chem., 284, 2009
2EXV
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BU of 2exv by Molmil
Crystal structure of the F7A mutant of the cytochrome c551 from Pseudomonas aeruginosa
Descriptor: ACETIC ACID, Cytochrome c-551, HEME C
Authors:Bonivento, D, Di Matteo, A, Borgia, A, Travaglini-Allocatelli, C, Brunori, M.
Deposit date:2005-11-09
Release date:2006-02-07
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Unveiling a Hidden Folding Intermediate in c-Type Cytochromes by Protein Engineering
J.Biol.Chem., 281, 2006

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