Author results

2BDZ
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MEXICAIN FROM JACARATIA MEXICANA
Descriptor:Mexicain, N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE
Authors:Gavira, J.A., Oliver-Salvador, M.C., Gonzalez-Ramirez, L.A., Soriano-Garcia, M., Garcia-Ruiz, J.M.
Deposit date:2005-10-21
Release date:2006-10-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystallographic structure of Mexicain from Jacaratia mexicana
To be Published
2OLP
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STRUCTURE AND LIGAND SELECTION OF HEMOGLOBIN II FROM LUCINA PECTINATA
Descriptor:Hemoglobin II, SULFATE ION, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Gavira, J.A., Camara-Artigas, A., de Jesus, W., Lopez-Garriga, J., Garcia-Ruiz, J.M.
Deposit date:2007-01-19
Release date:2007-12-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.932 Å)
Cite:Structure and Ligand Selection of Hemoglobin II from Lucina pectinata
J.Biol.Chem., 283, 2008
5LT9
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EVOLUTION OF PARALOGOUS CHEMORECEPTORS WITH SIMILAR CHEMOATTRACTANT PROFILES
Descriptor:Methyl-accepting chemotaxis protein PctB, ARGININE, SODIUM ION, ...
Authors:Gavira, J.A., Rico-Jimenez, M., Ortega, A., Conejero-Muriel, M., Zhulin, I., Krell, T.
Deposit date:2016-09-06
Release date:2017-09-20
Last modified:2018-12-12
Method:X-RAY DIFFRACTION (3 Å)
Cite:Ligand binding domain of Pseudomonas aeruginosa PAO1 amino acid chemorecpetors PctB in complex with L-Arg
To Be Published
5LTO
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LIGAND BINDING DOMAIN OF PSEUDOMONAS AERUGINOSA PAO1 AMINO ACID CHEMORECPETORS PCTB IN COMPLEX WITH L-GLN
Descriptor:Methyl-accepting chemotaxis protein PctB, GLUTAMINE, SULFATE ION, ...
Authors:Gavira, J.A., Rico-Jimenez, M., Conejero-Muriel, M., Krell, T.
Deposit date:2016-09-07
Release date:2017-09-20
Last modified:2018-10-17
Method:X-RAY DIFFRACTION (3.459 Å)
Cite:Ligand binding domain of Pseudomonas aeruginosa PAO1 amino acid chemorecpetors PctB in complex with L-Gln
To Be Published
5T65
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LIGAND BINDING DOMAIN OF PSEUDOMONAS AERUGINOSA PAO1 AMINO ACID CHEMORECEPTOR PCTA IN COMPLEX WITH L-ILE
Descriptor:Methyl-accepting chemotaxis protein PctA, ISOLEUCINE, SULFATE ION, ...
Authors:Gavira, J.A., Rico-Jimenez, M., Ortega, A., Conejero-Muriel, M., Zhulin, I., Krell, T.
Deposit date:2016-09-01
Release date:2017-09-13
Last modified:2018-12-12
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:LIGAND BINDING DOMAIN OF PSEUDOMONAS AERUGINOSA PAO1 AMINO ACID CHEMORECPETORS PCTA IN COMPLEX WITH L-ILE
To Be Published
1Z2U
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THE 1.1A CRYSTALLOGRAPHIC STRUCTURE OF UBIQUITIN-CONJUGATING ENZYME (UBC-2) FROM CAENORHABDITIS ELEGANS: FUNCTIONAL AND EVOLUTIONARY SIGNIFICANCE
Descriptor:Ubiquitin-conjugating enzyme E2 2, CHLORIDE ION, SODIUM ION, ...
Authors:Gavira, J.A., DiGiamamarino, E., Tempel, W., Liu, Z.J., Wang, B.C., Meehan, E., Ng, J.D., Southeast Collaboratory for Structural Genomics (SECSG)
Deposit date:2005-03-09
Release date:2005-03-22
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:The 1.1A crystallographic structure of ubiquitin-conjugating enzyme (ubc-2) from Caenorhabditis elegans: functional and evolutionary significance
To be published
1Z3D
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PROTEIN CRYSTAL GROWTH IMPROVEMENT LEADING TO THE 2.5A CRYSTALLOGRAPHIC STRUCTURE OF UBIQUITIN-CONJUGATING ENZYME (UBC-1) FROM CAENORHABDITIS ELEGANS
Descriptor:Ubiquitin-conjugating enzyme E2 1
Authors:Gavira, J.A., DiGiammarino, E., Tempel, W., Toh, D., Liu, Z.J., Wang, B.C., Meehan, E., Ng, J.D., Southeast Collaboratory for Structural Genomics (SECSG)
Deposit date:2005-03-11
Release date:2005-03-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Protein crystal growth improvement leading to the 2.5A crystallographic structure of ubiquitin-conjugating enzyme (ubc-1) from Caenorhabditis elegans
To be Published
1ZZY
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CRYSTAL STRUCTURE OF THIOREDOXIN MUTANT L7V
Descriptor:Thioredoxin 1
Authors:Gavira, J.A., Perez-Jimenez, R., Ibarra-Molero, B., Sanchez-Ruiz, J.M.
Deposit date:2005-06-15
Release date:2005-07-19
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of Thioredoxin Mutant L7V
To be Published
2FCH
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CRYSTAL STRUCTURE OF THIOREDOXIN MUTANT G74S
Descriptor:Thioredoxin 1, (4S)-2-METHYL-2,4-PENTANEDIOL
Authors:Gavira, J.A., Perez-Jimenez, R., Ibarra-Molero, B., Sanchez-Ruiz, J.M.
Deposit date:2005-12-12
Release date:2005-12-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of Thioredoxin Mutant G74S
To be Published
2FD3
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CRYSTAL STRUCTURE OF THIOREDOXIN MUTANT P34H
Descriptor:Thioredoxin 1
Authors:Gavira, J.A., Perez-Jimenez, R., Ibarra-Molero, B., Sanchez-Ruiz, J.M.
Deposit date:2005-12-13
Release date:2005-12-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal Structure of Thioredoxin Mutant P34H
To be Published
5LTV
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LIGAND BINDING REGIONS OF PSEUDOMONAS AERUGINOSA PAO1 AMINO ACID CHEMORECEPTORS PCTC IN COMPLEX WITH GABA
Descriptor:Chemotactic transducer PctC, GAMMA-AMINO-BUTANOIC ACID, SULFATE ION, ...
Authors:Gavira, J.A., Gimenez-Rico, M., Conejero-Muriel, M., Krell, T.
Deposit date:2016-09-07
Release date:2017-09-20
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Ligand binding regions of pseudomonas aeruginosa PAO1 amino acid chemoreceptors PctC in complex with GABA
To Be Published
5LTX
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LIGAND BINDING REGIONS OF PSEUDOMONAS AERUGINOSA PAO1 AMINO ACID CHEMORECEPTORS PCTA IN COMPLEX WITH L-MET
Descriptor:Chemotaxis protein, METHIONINE, ACETATE ION, ...
Authors:Gavira, J.A., Gimenez-Rico, M., Conejero-Muriel, M., Krell, T.
Deposit date:2016-09-07
Release date:2017-09-20
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Ligand binding regions of pseudomonas aeruginosa PAO1 amino acid chemoreceptors PctA in complex with L-Met
To Be Published
6F9G
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LIGAND BINDING DOMAIN OF P. PUTIDA KT2440 POLYAMINE CHEMORECPETORS MCPU IN COMPLEX PUTRESCINE.
Descriptor:Methyl-accepting chemotaxis protein McpU, 1,4-DIAMINOBUTANE, GLYCEROL, ...
Authors:Gavira, J.A., Conejero-Muriel, M.T., Ortega, A., Martin-Mora, D., Corral-Lugo, A., Morel, B., Krell, T.
Deposit date:2017-12-14
Release date:2018-03-28
Last modified:2018-06-13
Method:X-RAY DIFFRACTION (2.388 Å)
Cite:Structural Basis for Polyamine Binding at the dCACHE Domain of the McpU Chemoreceptor from Pseudomonas putida.
J. Mol. Biol., 430, 2018
6HW1
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ROOM TEMPERATURE STRUCTURE OF LIPASE FROM T. LANUGINOSA AT 2.5 A RESOLUTION
Descriptor:Lipase, N-ACETYL-D-GLUCOSAMINE, PHOSPHATE ION, ...
Authors:Gavira, J.A., Fernadez-Penas, R., Martinez-Rodriguez, S., Verdugo-Escamilla, C.
Deposit date:2018-10-11
Release date:2018-10-24
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Room temperature structure of lipase from T. Lanuginosa at 2.5 A resolution
To Be Published
2YFB
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X-RAY STRUCTURE OF MCPS LIGAND BINDING DOMAIN IN COMPLEX WITH SUCCINATE
Descriptor:METHYL-ACCEPTING CHEMOTAXIS TRANSDUCER, SUCCINIC ACID, ACETATE ION, ...
Authors:Gavira, J.A., Pineda-Molina, E., Krell, T.
Deposit date:2011-04-05
Release date:2012-04-18
Last modified:2013-07-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Evidence for Chemoreceptors with Bimodular Ligand-Binding Regions Harboring Two Signal-Binding Sites.
Proc.Natl.Acad.Sci.USA, 109, 2012
3DC8
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CRYSTAL STRUCTURE OF DIHYDROPYRIMIDINASE FROM SINORHIZOBIUM MELILOTI
Descriptor:Dihydropyrimidinase, ZINC ION, ACETATE ION, ...
Authors:Gavira, J.A., Martinez-Rodriguez, S.
Deposit date:2008-06-03
Release date:2009-04-21
Last modified:2011-08-10
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure of dihydropyrimidinase from Sinorhizobium meliloti CECT4114: new features in an amidohydrolase family member
J.Struct.Biol., 169, 2010
3PI1
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CRYSTALLOGRAPHIC STRUCTURE OF HBII-OXY FROM LUCINA PECTINATA AT PH 9.0
Descriptor:Hemoglobin II, PROTOPORPHYRIN IX CONTAINING FE, OXYGEN MOLECULE
Authors:Gavira, J.A., Nieves-Marrero, C.A., Ruiz-Martinez, C.R., Estremera-Andujar, R.A., Lopez-Garriga, J., Garcia-Ruiz, J.M.
Deposit date:2010-11-05
Release date:2011-11-09
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:pH-dependence crystallographic studies of the oxygen carrier hemoglobin II from Lucina pectinata
To be Published
3PI2
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CRYSTALLOGRAPHIC STRUCTURE OF HBII-OXY FROM LUCINA PECTINATA AT PH 8.0
Descriptor:Hemoglobin II, PROTOPORPHYRIN IX CONTAINING FE, OXYGEN MOLECULE, ...
Authors:Gavira, J.A., Nieves-Marrero, C.A., Ruiz-Martinez, C.R., Estremera-Andujar, R.A., Lopez-Garriga, J., Garcia-Ruiz, J.M.
Deposit date:2010-11-05
Release date:2011-11-09
Last modified:2016-12-21
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:pH-dependence crystallographic studies of the oxygen carrier hemoglobin II from Lucina pectinata
To be Published
3PI3
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CRYSTALLOGRAPHIC STRUCTURE OF HBII-OXY FROM LUCINA PECTINATA AT PH 5.0
Descriptor:Hemoglobin II, PROTOPORPHYRIN IX CONTAINING FE, OXYGEN MOLECULE
Authors:Gavira, J.A., Nieves-Marrero, C.A., Ruiz-Martinez, C.R., Estremera-Andujar, R.A., Lopez-Garriga, J., Garcia-Ruiz, J.M.
Deposit date:2010-11-05
Release date:2011-11-09
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:pH-dependence crystallographic studies of the oxygen carrier hemoglobin II from Lucina pectinata
To be Published
3PI4
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CRYSTALLOGRAPHIC STRUCTURE OF HBII-OXY FROM LUCINA PECTINATA AT PH 4.0
Descriptor:Hemoglobin II, PROTOPORPHYRIN IX CONTAINING FE
Authors:Gavira, J.A., Nieves-Marrero, C.A., Ruiz-Martinez, C.R., Estremera-Andujar, R.A., Lopez-Garriga, J., Garcia-Ruiz, J.M.
Deposit date:2010-11-05
Release date:2011-11-09
Method:X-RAY DIFFRACTION (3.17 Å)
Cite:pH-dependence crystallographic studies of the oxygen carrier hemoglobin II from Lucina pectinata
To be Published
4C6Y
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ANCESTRAL PNCA (LAST COMMON ANCESTORS OF GRAM-POSITIVE AND GRAM- NEGATIVE BACTERIA) BETA-LACTAMASE CLASS A
Descriptor:BETA-LACTAMASE, TETRAETHYLENE GLYCOL, DI(HYDROXYETHYL)ETHER, ...
Authors:Gavira, J.A., Risso, V.A., Sanchez-Ruiz, J.M.
Deposit date:2013-09-19
Release date:2014-04-16
Last modified:2017-09-13
Method:X-RAY DIFFRACTION (1.799 Å)
Cite:Phenotypic Comparisons of Consensus Variants Versus Laboratory Resurrections of Precambrian Proteins.
Proteins, 82, 2014
4C75
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CONSENSUS (ALL-CON) BETA-LACTAMASE CLASS A
Descriptor:BETA-LACTAMASE, SULFATE ION, ACETATE ION, ...
Authors:Gavira, J.A., Risso, V.A., Sanchez-Ruiz, J.M.
Deposit date:2013-09-19
Release date:2014-04-16
Last modified:2014-05-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Phenotypic Comparisons of Consensus Variants Versus Laboratory Resurrections of Precambrian Proteins.
Proteins, 82, 2014
5T7M
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LIGAND BINDING DOMAIN OF PSEUDOMONAS AERUGINOSA PAO1 AMINO ACID CHEMORECEPTOR PCTA IN COMPLEX WITH L-TRP
Descriptor:Chemotaxis protein, TRYPTOPHAN, ACETATE ION, ...
Authors:Gavira, J.A., Rico-Jimenez, M., Ortega, A., Conejero-Muriel, M., Zhulin, I., Krell, T.
Deposit date:2016-09-05
Release date:2017-09-20
Last modified:2018-12-12
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Evolution of paralogous chemoreceptors with similar chemoattractant profiles (to be published)
To Be Published
2H6X
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CRYSTAL STRUCTURE OF THIOREDOXIN WILD TYPE IN HEXAGONAL (P61) SPACE GROUP
Descriptor:Thioredoxin, (4S)-2-METHYL-2,4-PENTANEDIOL
Authors:Gavira, J.A., Godoy-Ruiz, R., Ibarra-Molero, B., Sanchez-Ruiz, J.M.
Deposit date:2006-06-01
Release date:2007-05-15
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of Thioredoxin Wild Type in Hexagonal (p61) Space Group
To be Published
2H6Y
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CRYSTAL STRUCTURE OF THIOREDOXIN MUTANT E48D IN HEXAGONAL (P61) SPACE GROUP
Descriptor:Thioredoxin, (4S)-2-METHYL-2,4-PENTANEDIOL
Authors:Gavira, J.A., Godoy-Ruiz, R., Ibarra-Molero, B., Sanchez-Ruiz, J.M.
Deposit date:2006-06-01
Release date:2007-05-15
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of Thioredoxin Mutant E48D in Hexagonal (p61) Space Group
To be Published