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3EHK
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BU of 3ehk by Molmil
Crystal structure of Pru du amandin, an allergenic protein from prunus dulcis
Descriptor: Prunin
Authors:Gaur, V, Salunke, D.M.
Deposit date:2008-09-13
Release date:2009-09-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of Pru du amandin, an allergenic protein from prunus dulcis
To be published
3LP9
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BU of 3lp9 by Molmil
Crystal structure of LS24, A Seed Albumin from Lathyrus sativus
Descriptor: CALCIUM ION, CHLORIDE ION, LS-24, ...
Authors:Gaur, V, Qureshi, I.A, Singh, A, Chanana, V, Salunke, D.M.
Deposit date:2010-02-05
Release date:2010-02-23
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure and functional insights of hemopexin fold protein from grass pea
Plant Physiol., 152, 2010
3OYO
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BU of 3oyo by Molmil
Crystal structure of hemopexin fold protein CP4 from cow pea
Descriptor: CALCIUM ION, CHLORIDE ION, SODIUM ION, ...
Authors:Gaur, V, Chanana, V, Salunke, D.M.
Deposit date:2010-09-23
Release date:2011-02-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The structure of a haemopexin-fold protein from cow pea (Vigna unguiculata) suggests functional diversity of haemopexins in plants
Acta Crystallogr.,Sect.F, 67, 2011
4XLG
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BU of 4xlg by Molmil
C. glabrata Slx1 in complex with Slx4CCD.
Descriptor: CHLORIDE ION, Structure-specific endonuclease subunit SLX1, Structure-specific endonuclease subunit SLX4, ...
Authors:Gaur, V, Wyatt, H.D.M, Komorowska, W, Szczepanowski, R.H, de Sanctis, D, Gorecka, K.M, West, S.C, Nowotny, M.
Deposit date:2015-01-13
Release date:2015-03-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Structural and Mechanistic Analysis of the Slx1-Slx4 Endonuclease.
Cell Rep, 10, 2015
4XM5
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BU of 4xm5 by Molmil
C. glabrata Slx1.
Descriptor: CHLORIDE ION, Structure-specific endonuclease subunit SLX1, ZINC ION
Authors:Gaur, V, Wyatt, H.D.M, Komorowska, W, Szczepanowski, R.H, de Sanctis, D, Gorecka, K.M, West, S.C, Nowotny, M.
Deposit date:2015-01-14
Release date:2015-03-25
Last modified:2015-05-20
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Structural and Mechanistic Analysis of the Slx1-Slx4 Endonuclease.
Cell Rep, 10, 2015
6SEH
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BU of 6seh by Molmil
Recognition and processing of branched DNA substrates by Slx1-Slx4 nuclease
Descriptor: Structure-specific endonuclease subunit SLX1, Structure-specific endonuclease subunit SLX4, ZINC ION
Authors:Gaur, V, Zajko, W, Nirwal, S, Szlachcic, A, Gapinska, M, Nowotny, M.
Deposit date:2019-07-30
Release date:2019-09-25
Last modified:2019-12-18
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Recognition and processing of branched DNA substrates by Slx1-Slx4 nuclease.
Nucleic Acids Res., 47, 2019
6SEI
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BU of 6sei by Molmil
Recognition and processing of branched DNA substrates by Slx1-Slx4 nuclease
Descriptor: CALCIUM ION, DNA (32-MER), Structure-specific endonuclease subunit SLX1, ...
Authors:Gaur, V, Zajko, W, Nirwal, S, Szlachcic, A, Gapinska, M, Nowotny, M.
Deposit date:2019-07-30
Release date:2019-09-25
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Recognition and processing of branched DNA substrates by Slx1-Slx4 nuclease.
Nucleic Acids Res., 47, 2019
4QW8
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BU of 4qw8 by Molmil
TERNARY CRYSTAL STRUCTURES of A Y-FAMILY DNA POLYMERASE DPO4 FROM SULFOLOBUS SOLFATARICUS IN COMPLEX WITH DNA AND D-DCTP
Descriptor: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(P*CP*AP*GP*GP*AP*GP*TP*CP*CP*TP*GP*TP*AP*GP*CP*C)-3'), ...
Authors:Gaur, V, Suo, Z.
Deposit date:2014-07-16
Release date:2014-08-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Structural and kinetic insights into binding and incorporation of L-nucleotide analogs by a Y-family DNA polymerase.
Nucleic Acids Res., 42, 2014
4QWA
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BU of 4qwa by Molmil
TERNARY CRYSTAL STRUCTURES OF A Y-FAMILY DNA POLYMERASE DPO4 FROM SULFOLOBUS SOLFATARICUS in COMPLEX WITH DNA AND (-)3TC-DP
Descriptor: CALCIUM ION, DNA (5'-D(P*CP*AP*GP*GP*AP*GP*TP*CP*CP*TP*GP*TP*AP*GP*CP*C)-3'), DNA (5'-D(P*GP*GP*CP*TP*AP*CP*AP*GP*GP*AP*CP*TP*C)-3'), ...
Authors:Gaur, V, Suo, Z.
Deposit date:2014-07-16
Release date:2014-08-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and kinetic insights into binding and incorporation of L-nucleotide analogs by a Y-family DNA polymerase.
Nucleic Acids Res., 42, 2014
4QW9
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BU of 4qw9 by Molmil
TERNARY CRYSTAL STRUCTURES of A Y-FAMILY DNA POLYMERASE DPO4 FROM SULFOLOBUS SOLFATARICUS IN COMPLEX WITH DNA AND (-)FTC-PPNP
Descriptor: CALCIUM ION, DNA (5'-D(P*CP*AP*GP*GP*AP*GP*TP*CP*CP*TP*GP*TP*AP*GP*CP*C)-3'), DNA (5'-D(P*GP*GP*CP*TP*AP*CP*AP*GP*GP*AP*CP*TP*C)-3'), ...
Authors:Gaur, V, Suo, Z.
Deposit date:2014-07-16
Release date:2014-08-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural and kinetic insights into binding and incorporation of L-nucleotide analogs by a Y-family DNA polymerase.
Nucleic Acids Res., 42, 2014
4QWE
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BU of 4qwe by Molmil
TERNARY CRYSTAL STRUCTURES of A Y-FAMILY DNA POLYMERASE DPO4 FROM SULFOLOBUS SOLFATARICUS IN COMPLEX WITH DNA AND (-)FTC-DP
Descriptor: CALCIUM ION, DNA (5'-D(P*CP*AP*GP*GP*AP*GP*TP*CP*CP*TP*GP*TP*AP*GP*CP*C)-3'), DNA (5'-D(P*GP*GP*CP*TP*AP*CP*AP*GP*GP*AP*CP*TP*C)-3'), ...
Authors:Gaur, V, Suo, Z.
Deposit date:2014-07-16
Release date:2014-08-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and kinetic insights into binding and incorporation of L-nucleotide analogs by a Y-family DNA polymerase.
Nucleic Acids Res., 42, 2014
4QWD
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BU of 4qwd by Molmil
TERNARY CRYSTAL STRUCTURES of A Y-FAMILY DNA POLYMERASE DPO4 FROM SULFOLOBUS SOLFATARICUS IN COMPLEX WITH DNA AND (-)3TC-PPNP
Descriptor: CALCIUM ION, DNA (5'-D(P*CP*AP*GP*GP*AP*GP*TP*CP*CP*TP*GP*TP*AP*GP*CP*C)-3'), DNA (5'-D(P*GP*GP*CP*TP*AP*CP*AP*GP*GP*AP*CP*TP*C)-3'), ...
Authors:Gaur, V, Suo, Z.
Deposit date:2014-07-16
Release date:2014-08-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural and kinetic insights into binding and incorporation of L-nucleotide analogs by a Y-family DNA polymerase.
Nucleic Acids Res., 42, 2014
8H3B
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BU of 8h3b by Molmil
Crystal structure of antibody scFv against M2e Influenza peptide
Descriptor: GLYCEROL, Single Chain Variable Fragment
Authors:Kumar, U, Madni, Z.K, Gaur, V, Salunke, D.M.
Deposit date:2022-10-08
Release date:2023-08-02
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:A structure and knowledge-based combinatorial approach to engineering universal scFv antibodies against influenza M2 protein.
J.Biomed.Sci., 30, 2023
8H3C
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BU of 8h3c by Molmil
Crystal structure of M2e Influenza peptide in complex with antibody scFv
Descriptor: Matrix protein 2, Single Chain Variable Fragment
Authors:Kumar, U, Madni, Z.K, Gaur, V, Salunke, D.M.
Deposit date:2022-10-08
Release date:2023-08-02
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.43 Å)
Cite:A structure and knowledge-based combinatorial approach to engineering universal scFv antibodies against influenza M2 protein.
J.Biomed.Sci., 30, 2023
8H73
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BU of 8h73 by Molmil
Crystal structure of antibody scFv against M2e Influenza peptide
Descriptor: CITRATE ANION, Single Chain Variable Fragment
Authors:Kumar, U, Madni, Z.K, Gaur, V, Salunke, D.M.
Deposit date:2022-10-18
Release date:2023-08-02
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:A structure and knowledge-based combinatorial approach to engineering universal scFv antibodies against influenza M2 protein.
J.Biomed.Sci., 30, 2023
7WME
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BU of 7wme by Molmil
Crystal Structure of the catalytic domain of At-HIGLE
Descriptor: CALCIUM ION, Structure-specific endonuclease subunit SLX1 homolog
Authors:Verma, P, Kumari, P, Negi, S, Yadav, G, Gaur, V.
Deposit date:2022-01-14
Release date:2022-04-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Holliday junction resolution by At-HIGLE: an SLX1 lineage endonuclease from Arabidopsis thaliana with a novel in-built regulatory mechanism.
Nucleic Acids Res., 50, 2022
7YUE
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BU of 7yue by Molmil
Epitope-directed anti-SARS CoV 2 scFv engineered against the key spike protein region.
Descriptor: Single chain variable Fragment, Spike protein S2
Authors:Kumar, U, Jaiswal, D, Gaur, V, Salunke, D.M.
Deposit date:2022-08-17
Release date:2023-02-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Epitope-directed anti-SARS-CoV-2 scFv engineered against the key spike protein region could block membrane fusion.
Protein Sci., 32, 2023
4H0H
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BU of 4h0h by Molmil
Crystal structure of mimicry-recognizing 2D10 scFv with peptide
Descriptor: 2D10 scFv, peptide
Authors:Tapryal, S, Gaur, V, Kaur, K.J, Salunke, D.M.
Deposit date:2012-09-08
Release date:2013-06-19
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural evaluation of a mimicry-recognizing paratope: plasticity in antigen-antibody interactions manifests in molecular mimicry.
J.Immunol., 191, 2013
4H0I
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BU of 4h0i by Molmil
Crystal Structure of Scfv-2D10 in Complex with Methyl Alpha-D-Mannopyranoside
Descriptor: 2D10 scFv, MAGNESIUM ION, methyl alpha-D-mannopyranoside
Authors:Tapryal, S, Gaur, V, Kaur, K.J, Salunke, D.M.
Deposit date:2012-09-08
Release date:2013-06-19
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural evaluation of a mimicry-recognizing paratope: plasticity in antigen-antibody interactions manifests in molecular mimicry.
J.Immunol., 191, 2013
4H0G
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BU of 4h0g by Molmil
Crystal structure of mimicry-recognizing native 2D10 scFv
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2D10 scFv
Authors:Tapryal, S, Gaur, V, Kaur, K.J, Salunke, D.M.
Deposit date:2012-09-08
Release date:2013-06-19
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural evaluation of a mimicry-recognizing paratope: plasticity in antigen-antibody interactions manifests in molecular mimicry.
J.Immunol., 191, 2013
4QWC
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BU of 4qwc by Molmil
Ternary Crystal Structures of a Y-family DNA polymerase DPO4 from Sulfobus Solfataricus in Comples with DNA and L-DCDP
Descriptor: 4-amino-1-{2-deoxy-5-O-[(R)-hydroxy(phosphonooxy)phosphoryl]-beta-L-erythro-pentofuranosyl}pyrimidin-2(1H)-one, ACETATE ION, CALCIUM ION, ...
Authors:Vyas, R, Suo, Z.
Deposit date:2014-07-16
Release date:2014-08-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural and kinetic insights into binding and incorporation of L-nucleotide analogs by a Y-family DNA polymerase.
Nucleic Acids Res., 42, 2014
4QWB
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BU of 4qwb by Molmil
CRYSTAL STRUCTURE of DPO4 LINKER REGION P236A MUTANT WITH AN INCOMING D-dCDP
Descriptor: ACETATE ION, CALCIUM ION, DEOXYCYTIDINE DIPHOSPHATE, ...
Authors:Vyas, R, Suo, Z.
Deposit date:2014-07-16
Release date:2014-08-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and kinetic insights into binding and incorporation of L-nucleotide analogs by a Y-family DNA polymerase.
Nucleic Acids Res., 42, 2014
5I4F
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BU of 5i4f by Molmil
scFv 2D10 complexed with alpha 1,6 mannobiose
Descriptor: alpha-D-mannopyranose-(1-6)-alpha-D-mannopyranose, scFv 2D10
Authors:Vashisht, S, Kumar, A, Kaur, K.J, Salunke, D.M.
Deposit date:2016-02-12
Release date:2016-12-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.549 Å)
Cite:Antibodies Can Exploit Molecular Crowding to Bind New Antigens at Noncanonical Paratope Positions
CHEMISTRYSELECT, 1, 2016

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