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4UPU
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BU of 4upu by Molmil
Crystal structure of IP3 3-K calmodulin binding region in complex with Calmodulin
Descriptor: CALCIUM ION, CALMODULIN, GLYCEROL, ...
Authors:Franco-Echevarria, E, Banos-Sanz, J.I, Monterroso, B, Round, A, Sanz-Aparicio, J, Gonzalez, B.
Deposit date:2014-06-18
Release date:2014-08-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:A New Calmodulin Binding Motif for Inositol 1,4,5-Trisphosphate 3-Kinase Regulation.
Biochem.J., 463, 2014
7QCE
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BU of 7qce by Molmil
Crystal structure of an atypical PHD finger of VIN3
Descriptor: DI(HYDROXYETHYL)ETHER, VIN3 (Protein VERNALIZATION INSENSITIVE 3), ZINC ION
Authors:Franco-Echevarria, E, Fiedler, M, Dean, C, Bienz, M.
Deposit date:2021-11-23
Release date:2022-11-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Plant vernalization proteins contain unusual PHD superdomains without histone H3 binding activity.
J.Biol.Chem., 298, 2022
5MWL
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BU of 5mwl by Molmil
INOSITOL 1,3,4,5,6-PENTAKISPHOSPHATE 2-KINASE FROM M. MUSCULUS IN COMPLEX WITH ATP and IP5
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Inositol-pentakisphosphate 2-kinase, MAGNESIUM ION, ...
Authors:Franco-Echevarria, E, Sanz-Aparicio, J, Gonzalez, B.
Deposit date:2017-01-18
Release date:2017-05-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:The crystal structure of mammalian inositol 1,3,4,5,6-pentakisphosphate 2-kinase reveals a new zinc-binding site and key features for protein function.
J. Biol. Chem., 292, 2017
5MW8
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BU of 5mw8 by Molmil
INOSITOL 1,3,4,5,6-PENTAKISPHOSPHATE 2-KINASE FROM M. MUSCULUS IN COMPLEX WITH ATP and IP5
Descriptor: ACETATE ION, ADENOSINE-5'-TRIPHOSPHATE, Inositol-pentakisphosphate 2-kinase, ...
Authors:Franco-Echevarria, E, Sanz-Aparicio, J, Gonzalez, B.
Deposit date:2017-01-18
Release date:2017-05-10
Last modified:2017-07-05
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The crystal structure of mammalian inositol 1,3,4,5,6-pentakisphosphate 2-kinase reveals a new zinc-binding site and key features for protein function.
J. Biol. Chem., 292, 2017
5MWM
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BU of 5mwm by Molmil
INOSITOL 1,3,4,5,6-PENTAKISPHOSPHATE 2-KINASE FROM M. MUSCULUS IN COMPLEX WITH IP6
Descriptor: INOSITOL HEXAKISPHOSPHATE, Inositol-pentakisphosphate 2-kinase, ZINC ION
Authors:Franco-Echevarria, E, Sanz-Aparicio, J, Gonzalez, B.
Deposit date:2017-01-18
Release date:2017-05-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The crystal structure of mammalian inositol 1,3,4,5,6-pentakisphosphate 2-kinase reveals a new zinc-binding site and key features for protein function.
J. Biol. Chem., 292, 2017
5O1W
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BU of 5o1w by Molmil
Structure of Nrd1 RNA binding domain
Descriptor: 1,2-ETHANEDIOL, Protein NRD1
Authors:Franco-Echevarria, E, Perez-Canadillas, J.M, Gonzalez, B.
Deposit date:2017-05-19
Release date:2017-08-02
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The structure of transcription termination factor Nrd1 reveals an original mode for GUAA recognition.
Nucleic Acids Res., 45, 2017
5O1Z
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BU of 5o1z by Molmil
Structure of Nrd1 RNA binding domain in complex with RNA (CGUAAA)
Descriptor: Protein NRD1, RNA (5'-R(*CP*GP*UP*AP*AP*A)-3')
Authors:Franco-Echevarria, E, Perez-Canadillas, J.M, Gonzalez, B.
Deposit date:2017-05-19
Release date:2017-08-02
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:The structure of transcription termination factor Nrd1 reveals an original mode for GUAA recognition.
Nucleic Acids Res., 45, 2017
5O20
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BU of 5o20 by Molmil
Structure of Nrd1 RNA binding domain in complex with RNA (UUAGUAAUCC)
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Protein NRD1, RNA (5'-R(*UP*AP*GP*UP*AP*AP*UP*C)-3')
Authors:Franco-Echevarria, E, Perez-Canadillas, J.M, Gonzalez, B.
Deposit date:2017-05-19
Release date:2017-08-02
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (3.53 Å)
Cite:The structure of transcription termination factor Nrd1 reveals an original mode for GUAA recognition.
Nucleic Acids Res., 45, 2017
5O1Y
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BU of 5o1y by Molmil
Structure of Nrd1 RNA binding domain in complex with RNA (GUAA)
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Protein NRD1, ...
Authors:Franco-Echevarria, E, Perez-Canadillas, J.M, Gonzalez, B.
Deposit date:2017-05-19
Release date:2017-08-02
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:The structure of transcription termination factor Nrd1 reveals an original mode for GUAA recognition.
Nucleic Acids Res., 45, 2017
5O1X
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BU of 5o1x by Molmil
Structure of Nrd1 RNA binding domain
Descriptor: 1,2-ETHANEDIOL, Protein NRD1, THIOCYANATE ION
Authors:Franco-Echevarria, E, Perez-Canadillas, J.M, Gonzalez, B.
Deposit date:2017-05-19
Release date:2017-08-02
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The structure of transcription termination factor Nrd1 reveals an original mode for GUAA recognition.
Nucleic Acids Res., 45, 2017
7O6W
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BU of 7o6w by Molmil
Crystal structure of (the) VEL1 VEL polymerising domain (I664D mutant)
Descriptor: PHOSPHATE ION, VIN3-like protein 2
Authors:Fiedler, M, Franco-Echevarria, E, Dean, C, Bienz, M.
Deposit date:2021-04-12
Release date:2022-11-09
Last modified:2022-11-23
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Head-to-tail polymerization by VEL proteins underpins cold-induced Polycomb silencing in flowering control.
Cell Rep, 41, 2022
7O6V
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BU of 7o6v by Molmil
Crystal structure of the VEL1 VEL polymerising domain (R643A K645D I664D mutant)
Descriptor: VIN3-like protein 2
Authors:Fiedler, M, Franco-Echevarria, E, Dean, C, Bienz, M.
Deposit date:2021-04-12
Release date:2022-11-09
Last modified:2022-11-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Head-to-tail polymerization by VEL proteins underpins cold-induced Polycomb silencing in flowering control.
Cell Rep, 41, 2022
7O6T
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BU of 7o6t by Molmil
Crystal structure of the polymerising VEL domain of VIN3 (R556D I575D mutant)
Descriptor: MAGNESIUM ION, Protein VERNALIZATION INSENSITIVE 3
Authors:Fiedler, M, Franco-Echevarria, E, Dean, C, Bienz, M.
Deposit date:2021-04-12
Release date:2022-11-09
Last modified:2022-11-23
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Head-to-tail polymerization by VEL proteins underpins cold-induced Polycomb silencing in flowering control.
Cell Rep, 41, 2022
7OQV
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BU of 7oqv by Molmil
Crystal structure of the polymerising VEL domain of VIN3 (I575D mutant)
Descriptor: Protein VERNALIZATION INSENSITIVE 3
Authors:Fiedler, M, Franco-Echevarria, E, Dean, C, Bienz, M.
Deposit date:2021-06-04
Release date:2022-11-09
Last modified:2022-11-23
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Head-to-tail polymerization by VEL proteins underpins cold-induced Polycomb silencing in flowering control.
Cell Rep, 41, 2022
7O6U
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BU of 7o6u by Molmil
Crystal structure of the VIN3 VEL polymerising domain (R554A R556D mutant)
Descriptor: Protein VERNALIZATION INSENSITIVE 3
Authors:Fiedler, M, Franco-Echevarria, E, Dean, C, Bienz, M.
Deposit date:2021-04-12
Release date:2022-11-09
Last modified:2022-11-23
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Head-to-tail polymerization by VEL proteins underpins cold-induced Polycomb silencing in flowering control.
Cell Rep, 41, 2022
5O1T
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BU of 5o1t by Molmil
Solution structure of the RNA binding domain of Nrd1
Descriptor: Protein NRD1
Authors:Martinez-Lumbreras, S, Perez-Canadillas, J.M.
Deposit date:2017-05-19
Release date:2017-08-02
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:The structure of transcription termination factor Nrd1 reveals an original mode for GUAA recognition.
Nucleic Acids Res., 45, 2017
7AUU
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BU of 7auu by Molmil
Yeast Diphosphoinositol Polyphosphate Phosphohydrolase DDP1-nose mutant in complex with InsP6
Descriptor: Diphosphoinositol polyphosphate phosphohydrolase DDP1,Diphosphoinositol polyphosphate phosphohydrolase DDP1, INOSITOL HEXAKISPHOSPHATE, MAGNESIUM ION
Authors:Marquez-Monino, M.A, Gonzalez, B.
Deposit date:2020-11-03
Release date:2021-05-19
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Multiple substrate recognition by yeast diadenosine and diphosphoinositol polyphosphate phosphohydrolase through phosphate clamping.
Sci Adv, 7, 2021
7AUT
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BU of 7aut by Molmil
Yeast Diphosphoinositol Polyphosphate Phosphohydrolase DDP1 mutation K63A
Descriptor: CHLORIDE ION, Diphosphoinositol polyphosphate phosphohydrolase DDP1, MAGNESIUM ION
Authors:Marquez-Monino, M.A, Ortega-Garcia, R, Gonzalez, B.
Deposit date:2020-11-03
Release date:2021-05-19
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Multiple substrate recognition by yeast diadenosine and diphosphoinositol polyphosphate phosphohydrolase through phosphate clamping.
Sci Adv, 7, 2021
7AUN
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BU of 7aun by Molmil
Yeast Diphosphoinositol Polyphosphate Phosphohydrolase DDP1 in complex with PCP-InsP8
Descriptor: Diphosphoinositol polyphosphate phosphohydrolase DDP1, MAGNESIUM ION, {[(1R,3S,4S,5R,6S)-2,4,5,6-tetrakis(phosphonooxy)cyclohexane-1,3-diyl]bis[oxy(hydroxyphosphoryl)methanediyl]}bis(phosphonic acid)
Authors:Marquez-Monino, M.A, Gonzalez, B.
Deposit date:2020-11-03
Release date:2021-05-19
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Multiple substrate recognition by yeast diadenosine and diphosphoinositol polyphosphate phosphohydrolase through phosphate clamping.
Sci Adv, 7, 2021
7AUP
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BU of 7aup by Molmil
Yeast Diphosphoinositol Polyphosphate Phosphohydrolase DDP1 in complex with PCP-InsP7
Descriptor: Diphosphoinositol polyphosphate phosphohydrolase DDP1, MAGNESIUM ION, [oxidanyl-[(2~{S},3~{S},5~{R},6~{S})-2,3,4,5,6-pentaphosphonooxycyclohexyl]oxy-phosphoryl]methylphosphonic acid
Authors:Marquez-Monino, M.A, Gonzalez, B.
Deposit date:2020-11-03
Release date:2021-05-19
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Multiple substrate recognition by yeast diadenosine and diphosphoinositol polyphosphate phosphohydrolase through phosphate clamping.
Sci Adv, 7, 2021
7AUM
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BU of 7aum by Molmil
Yeast Diphosphoinositol Polyphosphate Phosphohydrolase DDP1 in complex with 5-PCF2Am-InsP5
Descriptor: (1,1-difluoro-2-oxo-2-{[(1s,2R,3S,4s,5R,6S)-2,3,4,5,6-pentakis(phosphonooxy)cyclohexyl]amino}ethyl)phosphonic acid, Diphosphoinositol polyphosphate phosphohydrolase DDP1
Authors:Marquez-Monino, M.A, Gonzalez, B.
Deposit date:2020-11-03
Release date:2021-05-19
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Multiple substrate recognition by yeast diadenosine and diphosphoinositol polyphosphate phosphohydrolase through phosphate clamping.
Sci Adv, 7, 2021
7AUL
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BU of 7aul by Molmil
Yeast Diphosphoinositol Polyphosphate Phosphohydrolase DDP1 in complex with 5-InsP7 in presence of Mg
Descriptor: (1r,2R,3S,4s,5R,6S)-2,3,4,5,6-pentakis(phosphonooxy)cyclohexyl trihydrogen diphosphate, ACETATE ION, Diphosphoinositol polyphosphate phosphohydrolase DDP1, ...
Authors:Marquez-Monino, M.A, Gonzalez, B.
Deposit date:2020-11-03
Release date:2021-05-19
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Multiple substrate recognition by yeast diadenosine and diphosphoinositol polyphosphate phosphohydrolase through phosphate clamping.
Sci Adv, 7, 2021
7AUR
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BU of 7aur by Molmil
Yeast Diphosphoinositol Polyphosphate Phosphohydrolase DDP1 in complex with AMP-PNP
Descriptor: CHLORIDE ION, Diphosphoinositol polyphosphate phosphohydrolase DDP1, MAGNESIUM ION, ...
Authors:Marquez-Monino, M.A, Gonzalez, B.
Deposit date:2020-11-03
Release date:2021-05-19
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Multiple substrate recognition by yeast diadenosine and diphosphoinositol polyphosphate phosphohydrolase through phosphate clamping.
Sci Adv, 7, 2021
7AUK
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BU of 7auk by Molmil
Yeast Diphosphoinositol Polyphosphate Phosphohydrolase DDP1 in complex with 5-InsP7
Descriptor: (1r,2R,3S,4s,5R,6S)-2,3,4,5,6-pentakis(phosphonooxy)cyclohexyl trihydrogen diphosphate, Diphosphoinositol polyphosphate phosphohydrolase DDP1
Authors:Marquez-Monino, M.A, Gonzalez, B.
Deposit date:2020-11-03
Release date:2021-05-19
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:Multiple substrate recognition by yeast diadenosine and diphosphoinositol polyphosphate phosphohydrolase through phosphate clamping.
Sci Adv, 7, 2021
7AUO
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BU of 7auo by Molmil
Yeast Diphosphoinositol Polyphosphate Phosphohydrolase DDP1 in complex with PA-InsP8
Descriptor: Diphosphoinositol polyphosphate phosphohydrolase DDP1, {[(1R,3S,4S,5R,6S)-2,4,5,6-tetrakis(phosphonooxy)cyclohexane-1,3-diyl]bis[oxy(2-oxoethane-2,1-diyl)]}bis(phosphonic acid)
Authors:Marquez-Monino, M.A, Gonzalez, B.
Deposit date:2020-11-03
Release date:2021-05-19
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Multiple substrate recognition by yeast diadenosine and diphosphoinositol polyphosphate phosphohydrolase through phosphate clamping.
Sci Adv, 7, 2021

 

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